Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is gluP [H]
Identifier: 93006714
GI number: 93006714
Start: 2335822
End: 2336868
Strand: Direct
Name: gluP [H]
Synonym: Pcryo_1890
Alternate gene names: 93006714
Gene position: 2335822-2336868 (Clockwise)
Preceding gene: 93006713
Following gene: 93006715
Centisome position: 76.34
GC content: 41.55
Gene sequence:
>1047_bases ATGACCATTCAACAATTATTAAAGACAGCGCCTGTTACCACCTTGTTATTAGTCAGCTTTATCGGGCTATTTATCATGCA GGTATTAACGGGTGTCGATGCCAATAATCCTTCAACTGAAGCGCTGATAAAATGGGGTGCCAATGCCTTGCCTTTTACTA TGGATAATGAGCCATGGCGCTTGGTGAGCAGTGCGTTTTTGCATATTGGGCTGATGCATTTATTGTTTAATGGTTTTGCC ATGTATTTTTTTGGGCAAATCGCCGAGCCGATGTTTGGCTCCGCGAAGTTTTTGGCGCTATTTTTACTGGCAGCAATCGG TGGCAACTTACTGAATAATTACGTCACATGGCAAGGTATTGTGGACGGGACAGGACAAGCCGGATTATCTGCGGGCGCAT CGGGCGGTATCATGGGTATTGGCGCAGCGTTATTAATCGCCGCGCTGTTTAAGATATCAGTCAATGGTATGGTGCTGAAT CTTAAAAGCCTGATATTTATTATGGGCATCAACCTAGTCTATGGTTTTGCGGTGCCGGGTATCGACAATGCTGGTCACAT TGGCGGTGCGATTACCGGTCTTATCATTTCACTACCTTTTGCGATTGCCTATCGTCAACGTATGGCAGCTGTCATACAGA ATATTGCCACTTACGAGAATGATTATTTACCCCATTATCAAAGTGAGCAACAAAACGAATATCATACCACTTATATTAAT ACGCCAGTGAATAGCGGCACTGACTTTGATAATAATGCACACTTAAATAATACTCATTTAAATAACGCCAGTTTGCATAA TGAGAGTCATGTAGATAATAATAGTGGTGTAAACTCAAACGTAACTGTTAACCCTACCAATCCTATTCGCCCTACTCTTA ACGAAACTCTGAATGAAAAAAGCACAGCCATTAAACCTGCGCTTATTTGGCAATTGCTGCCATGGATTGTAATGTTATTT ATTATCATTGGCTTTATGTGGTGGTGGCAAGATATTCATCAGCAATTAATAGAAGTGCTCAATGCCATTGAGCAAAGCAC TGTTTAA
Upstream 100 bases:
>100_bases AGTGTAGACGATATAACTACTTAGACTTGTTGGTCGCTTTCTTTATACTATCTATACCCTTTATACTGTACTGATAATTT TTTATTGATAATTAGATGTT
Downstream 100 bases:
>100_bases CCTATATCTCTTTTAGTTTTACCTGATTCCAATGTACAAAATCCTTACGAGTTTTACTATTTTTATCCCTTTGTTTCACC CACTTATGAGAGCAAATCAT
Product: rhomboid-like protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTIQQLLKTAPVTTLLLVSFIGLFIMQVLTGVDANNPSTEALIKWGANALPFTMDNEPWRLVSSAFLHIGLMHLLFNGFA MYFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGIVDGTGQAGLSAGASGGIMGIGAALLIAALFKISVNGMVLN LKSLIFIMGINLVYGFAVPGIDNAGHIGGAITGLIISLPFAIAYRQRMAAVIQNIATYENDYLPHYQSEQQNEYHTTYIN TPVNSGTDFDNNAHLNNTHLNNASLHNESHVDNNSGVNSNVTVNPTNPIRPTLNETLNEKSTAIKPALIWQLLPWIVMLF IIIGFMWWWQDIHQQLIEVLNAIEQSTV
Sequences:
>Translated_348_residues MTIQQLLKTAPVTTLLLVSFIGLFIMQVLTGVDANNPSTEALIKWGANALPFTMDNEPWRLVSSAFLHIGLMHLLFNGFA MYFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGIVDGTGQAGLSAGASGGIMGIGAALLIAALFKISVNGMVLN LKSLIFIMGINLVYGFAVPGIDNAGHIGGAITGLIISLPFAIAYRQRMAAVIQNIATYENDYLPHYQSEQQNEYHTTYIN TPVNSGTDFDNNAHLNNTHLNNASLHNESHVDNNSGVNSNVTVNPTNPIRPTLNETLNEKSTAIKPALIWQLLPWIVMLF IIIGFMWWWQDIHQQLIEVLNAIEQSTV >Mature_347_residues TIQQLLKTAPVTTLLLVSFIGLFIMQVLTGVDANNPSTEALIKWGANALPFTMDNEPWRLVSSAFLHIGLMHLLFNGFAM YFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGIVDGTGQAGLSAGASGGIMGIGAALLIAALFKISVNGMVLNL KSLIFIMGINLVYGFAVPGIDNAGHIGGAITGLIISLPFAIAYRQRMAAVIQNIATYENDYLPHYQSEQQNEYHTTYINT PVNSGTDFDNNAHLNNTHLNNASLHNESHVDNNSGVNSNVTVNPTNPIRPTLNETLNEKSTAIKPALIWQLLPWIVMLFI IIGFMWWWQDIHQQLIEVLNAIEQSTV
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 38028; Mature: 37897
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQQLLKTAPVTTLLLVSFIGLFIMQVLTGVDANNPSTEALIKWGANALPFTMDNEPWR CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHH LVSSAFLHIGLMHLLFNGFAMYFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEE VDGTGQAGLSAGASGGIMGIGAALLIAALFKISVNGMVLNLKSLIFIMGINLVYGFAVPG ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC IDNAGHIGGAITGLIISLPFAIAYRQRMAAVIQNIATYENDYLPHYQSEQQNEYHTTYIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE TPVNSGTDFDNNAHLNNTHLNNASLHNESHVDNNSGVNSNVTVNPTNPIRPTLNETLNEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH STAIKPALIWQLLPWIVMLFIIIGFMWWWQDIHQQLIEVLNAIEQSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIQQLLKTAPVTTLLLVSFIGLFIMQVLTGVDANNPSTEALIKWGANALPFTMDNEPWR CHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHH LVSSAFLHIGLMHLLFNGFAMYFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEE VDGTGQAGLSAGASGGIMGIGAALLIAALFKISVNGMVLNLKSLIFIMGINLVYGFAVPG ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC IDNAGHIGGAITGLIISLPFAIAYRQRMAAVIQNIATYENDYLPHYQSEQQNEYHTTYIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE TPVNSGTDFDNNAHLNNTHLNNASLHNESHVDNNSGVNSNVTVNPTNPIRPTLNETLNEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH STAIKPALIWQLLPWIVMLFIIIGFMWWWQDIHQQLIEVLNAIEQSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]