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The map label for this gene is miaE [H]

Identifier: 93006703

GI number: 93006703

Start: 2322445

End: 2323026

Strand: Direct

Name: miaE [H]

Synonym: Pcryo_1879

Alternate gene names: 93006703

Gene position: 2322445-2323026 (Clockwise)

Preceding gene: 93006690

Following gene: 93006708

Centisome position: 75.9

GC content: 43.99

Gene sequence:

>582_bases
TTGGGCGCACGAACCTCACAAGCTTGGGTCAACGCCGCTGTTAATAACTTACCACTGATTATTCAAGACCATGCCAATTG
TGAAAAAAAGGCCGCCGGTACCGCGATGAATCTCATCTTTCGCTATGAGTTCTCTTATGATTTACAGCGTAAATTGGCAC
AATTGATACGTGAAGAAATGCTGCACTATGAGCAAGTGCTCGGCATTATGAATGAGCGCGGGCAAGCATGGAAATATCTA
AGTGCTGGACGCTATGCCAAAGGGATGCTAAAACACAAGCGTACTTATGAACCCGCTGCAATGGTAGATGTGCTGATTAT
TGGTGCATTTATCGAGGCACGTTCTTGTGAGCGTTTTGCGGCACTTTCTGAGGTTATCAATGATGAGCGTTTGGCAAAAT
ACTATCGTTATTTATTAAAATCAGAAAGCCGTCATTTTGAAGATTATTTGGCACTAGCGCAGTCATTGTCTGATGACAGT
ATCGATGAGCGTGTGGCATTCTTTAAAGAAGTAGAAGCAGAGCTGATATCAACTCCAGATACTGAGCTGCGCTTTCATAG
CGGCGACCCTATTGCTCTCTAA

Upstream 100 bases:

>100_bases
AGATTCTGAAAATAGCAGTAGTAATGATAGCGTTGATATCATTTCTATCACCCAACTCAGCACGCCACTAAAGGTAGATT
TATCGCCTATTTTTGATTTC

Downstream 100 bases:

>100_bases
TTTATTAAATCTATAGTGAGTTCAATATAAAAGAGTTACGCTCAGAATAGCATTATGCTGGGATAAATTTCTCTCGCTTG
CTATGCGCTTCGCACTCCAG

Product: tRNA--hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MGARTSQAWVNAAVNNLPLIIQDHANCEKKAAGTAMNLIFRYEFSYDLQRKLAQLIREEMLHYEQVLGIMNERGQAWKYL
SAGRYAKGMLKHKRTYEPAAMVDVLIIGAFIEARSCERFAALSEVINDERLAKYYRYLLKSESRHFEDYLALAQSLSDDS
IDERVAFFKEVEAELISTPDTELRFHSGDPIAL

Sequences:

>Translated_193_residues
MGARTSQAWVNAAVNNLPLIIQDHANCEKKAAGTAMNLIFRYEFSYDLQRKLAQLIREEMLHYEQVLGIMNERGQAWKYL
SAGRYAKGMLKHKRTYEPAAMVDVLIIGAFIEARSCERFAALSEVINDERLAKYYRYLLKSESRHFEDYLALAQSLSDDS
IDERVAFFKEVEAELISTPDTELRFHSGDPIAL
>Mature_192_residues
GARTSQAWVNAAVNNLPLIIQDHANCEKKAAGTAMNLIFRYEFSYDLQRKLAQLIREEMLHYEQVLGIMNERGQAWKYLS
AGRYAKGMLKHKRTYEPAAMVDVLIIGAFIEARSCERFAALSEVINDERLAKYYRYLLKSESRHFEDYLALAQSLSDDSI
DERVAFFKEVEAELISTPDTELRFHSGDPIAL

Specific function: Production of the modified nucleoside 2-methylthio-cis- ribozeatin (MS[2]IO[6]A) found in some tRNAs. Catalyzes the oxygen-dependent transformation of MS[2]I[6]A into MS[2]IO[6]A [H]

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR010386 [H]

Pfam domain/function: PF06175 MiaE [H]

EC number: NA

Molecular weight: Translated: 22147; Mature: 22015

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARTSQAWVNAAVNNLPLIIQDHANCEKKAAGTAMNLIFRYEFSYDLQRKLAQLIREEM
CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LHYEQVLGIMNERGQAWKYLSAGRYAKGMLKHKRTYEPAAMVDVLIIGAFIEARSCERFA
HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALSEVINDERLAKYYRYLLKSESRHFEDYLALAQSLSDDSIDERVAFFKEVEAELISTPD
HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
TELRFHSGDPIAL
CCEEECCCCCCCC
>Mature Secondary Structure 
GARTSQAWVNAAVNNLPLIIQDHANCEKKAAGTAMNLIFRYEFSYDLQRKLAQLIREEM
CCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LHYEQVLGIMNERGQAWKYLSAGRYAKGMLKHKRTYEPAAMVDVLIIGAFIEARSCERFA
HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALSEVINDERLAKYYRYLLKSESRHFEDYLALAQSLSDDSIDERVAFFKEVEAELISTPD
HHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
TELRFHSGDPIAL
CCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]