Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is tgt [H]
Identifier: 93006527
GI number: 93006527
Start: 2107566
End: 2108717
Strand: Direct
Name: tgt [H]
Synonym: Pcryo_1703
Alternate gene names: 93006527
Gene position: 2107566-2108717 (Clockwise)
Preceding gene: 93006525
Following gene: 93006540
Centisome position: 68.88
GC content: 44.27
Gene sequence:
>1152_bases ATGCAATTTGTCTTACATAAAACAGCCAGTGGTGTCACTCGCGCACGCCGTGGTACAGTCCACCTCAATCATGGCGATGT ACAAACGCCAGCCTTTATGCCAGTAGGTACTTACGGTACCGTTAAAGGCATGCTACCACGTGATATTGAAGCAATTGGCG CAGATATCATCTTGGGCAATACTTTTCATTTATGGTTACGCCCTGGTACCGACATTATTGATAAATTCGGTGGCTTACAT AAATTCATGCATTGGGATAAGCCTATTTTGACTGACTCTGGCGGATTTCAGGTATTCAGTCTTGGCGCGATGCGTAAGAT CACTGAAGAAGGTGTGACTTTTAAATCACCTATCGATGGTGCTAAAGTCTTTTTATCACCAGAAAAATCGATGCAGATTC AATATAGCTTGAACTCAGATATCGTGATGCAGTTTGATGAGTGTACGCCCTATCCTGCCACTCACGATGAAGCTAAAAAG TCTTTAGAGTTGTCACTACGTTGGGGACAACGCTGCGTTGATGAGCATAAAAATCTTGGCAGTACCAATGCGTTATTTGG CATCATTCAAGGCAGTATGTACGCTGATTTACGCAAGCAATCACTAGAAGGCTTGCTTGAAATTGGCTTTGATGGCTATG CCATTGGCGGTTTGTCTGTTGGCGAGCCAAAAGAAGAGATGATAGACGTCCTAGATTATATCGCAGATGACATGCCTGCT GATAAGCCGCGCTATCTGATGGGTGTCGGTAAGCCTGAAGATCTCGTTGAAGGAGTACGCCGCGGTGTCGATATGTTCGA TTGTGTCATGCCAACCCGGAATGCGCGTAATGGTCATTATTTTGTCACAGGCGACGCCGACAATGCGGGCGTAGTACGTA TACGCAATAGCCAATACCGCACCGATGAAGGTCCATTAGACCCTGAATGCGATTGCTATACTTGCCAGAATTTTAGTCGT GCTTATTTATCGCATTTGAATAAATGTAAAGAGATGCTTGGCGCGCAGTTAGCGACGATTCATAACTTACGTTACTATCA ACGTTTGATGCAAAATATCAGAGATGCCATCGAACAAGATAAATTTGATGAGTTCGTGAATGAATTTTATAGCAAACGCG GACAGACGGTGCCAGAGCTGAATTTGCGTTAA
Upstream 100 bases:
>100_bases ACACCCCATGAAATCTAAGCTAAATAAACATCAATAACCAAAAAAAGCCTAACAATGCTATAATTAGCACCATTTTCATA GCTCATATAGCGGTTACCTT
Downstream 100 bases:
>100_bases TAGTAATTTGACATTAGCTATTCAGATATAAAATACAAAAAAAGGCTTAAGATCAACCTTAAGCCTTTTTTGTTCACTAA ATTTTGACAAGCTAACTATC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MQFVLHKTASGVTRARRGTVHLNHGDVQTPAFMPVGTYGTVKGMLPRDIEAIGADIILGNTFHLWLRPGTDIIDKFGGLH KFMHWDKPILTDSGGFQVFSLGAMRKITEEGVTFKSPIDGAKVFLSPEKSMQIQYSLNSDIVMQFDECTPYPATHDEAKK SLELSLRWGQRCVDEHKNLGSTNALFGIIQGSMYADLRKQSLEGLLEIGFDGYAIGGLSVGEPKEEMIDVLDYIADDMPA DKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHYFVTGDADNAGVVRIRNSQYRTDEGPLDPECDCYTCQNFSR AYLSHLNKCKEMLGAQLATIHNLRYYQRLMQNIRDAIEQDKFDEFVNEFYSKRGQTVPELNLR
Sequences:
>Translated_383_residues MQFVLHKTASGVTRARRGTVHLNHGDVQTPAFMPVGTYGTVKGMLPRDIEAIGADIILGNTFHLWLRPGTDIIDKFGGLH KFMHWDKPILTDSGGFQVFSLGAMRKITEEGVTFKSPIDGAKVFLSPEKSMQIQYSLNSDIVMQFDECTPYPATHDEAKK SLELSLRWGQRCVDEHKNLGSTNALFGIIQGSMYADLRKQSLEGLLEIGFDGYAIGGLSVGEPKEEMIDVLDYIADDMPA DKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHYFVTGDADNAGVVRIRNSQYRTDEGPLDPECDCYTCQNFSR AYLSHLNKCKEMLGAQLATIHNLRYYQRLMQNIRDAIEQDKFDEFVNEFYSKRGQTVPELNLR >Mature_383_residues MQFVLHKTASGVTRARRGTVHLNHGDVQTPAFMPVGTYGTVKGMLPRDIEAIGADIILGNTFHLWLRPGTDIIDKFGGLH KFMHWDKPILTDSGGFQVFSLGAMRKITEEGVTFKSPIDGAKVFLSPEKSMQIQYSLNSDIVMQFDECTPYPATHDEAKK SLELSLRWGQRCVDEHKNLGSTNALFGIIQGSMYADLRKQSLEGLLEIGFDGYAIGGLSVGEPKEEMIDVLDYIADDMPA DKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHYFVTGDADNAGVVRIRNSQYRTDEGPLDPECDCYTCQNFSR AYLSHLNKCKEMLGAQLATIHNLRYYQRLMQNIRDAIEQDKFDEFVNEFYSKRGQTVPELNLR
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=357, Percent_Identity=46.218487394958, Blast_Score=323, Evalue=1e-88, Organism=Escherichia coli, GI1786607, Length=382, Percent_Identity=65.9685863874346, Blast_Score=533, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17544680, Length=355, Percent_Identity=41.9718309859155, Blast_Score=292, Evalue=2e-79, Organism=Caenorhabditis elegans, GI25146502, Length=172, Percent_Identity=29.6511627906977, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI19920510, Length=368, Percent_Identity=42.6630434782609, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI21355311, Length=266, Percent_Identity=25.5639097744361, Blast_Score=96, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 43098; Mature: 43098
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVLHKTASGVTRARRGTVHLNHGDVQTPAFMPVGTYGTVKGMLPRDIEAIGADIILGN CCEEEECHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCEEEECC TFHLWLRPGTDIIDKFGGLHKFMHWDKPILTDSGGFQVFSLGAMRKITEEGVTFKSPIDG EEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEECCCCCC AKVFLSPEKSMQIQYSLNSDIVMQFDECTPYPATHDEAKKSLELSLRWGQRCVDEHKNLG CEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC STNALFGIIQGSMYADLRKQSLEGLLEIGFDGYAIGGLSVGEPKEEMIDVLDYIADDMPA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCC DKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHYFVTGDADNAGVVRIRNSQYR CCCCEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCC TDEGPLDPECDCYTCQNFSRAYLSHLNKCKEMLGAQLATIHNLRYYQRLMQNIRDAIEQD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFDEFVNEFYSKRGQTVPELNLR HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQFVLHKTASGVTRARRGTVHLNHGDVQTPAFMPVGTYGTVKGMLPRDIEAIGADIILGN CCEEEECHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCEEEECC TFHLWLRPGTDIIDKFGGLHKFMHWDKPILTDSGGFQVFSLGAMRKITEEGVTFKSPIDG EEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEECCCCCC AKVFLSPEKSMQIQYSLNSDIVMQFDECTPYPATHDEAKKSLELSLRWGQRCVDEHKNLG CEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC STNALFGIIQGSMYADLRKQSLEGLLEIGFDGYAIGGLSVGEPKEEMIDVLDYIADDMPA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCC DKPRYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHYFVTGDADNAGVVRIRNSQYR CCCCEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCC TDEGPLDPECDCYTCQNFSRAYLSHLNKCKEMLGAQLATIHNLRYYQRLMQNIRDAIEQD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFDEFVNEFYSKRGQTVPELNLR HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA