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The map label for this gene is hscB [H]

Identifier: 93006483

GI number: 93006483

Start: 2042564

End: 2043145

Strand: Direct

Name: hscB [H]

Synonym: Pcryo_1659

Alternate gene names: 93006483

Gene position: 2042564-2043145 (Clockwise)

Preceding gene: 93006482

Following gene: 93006484

Centisome position: 66.75

GC content: 40.89

Gene sequence:

>582_bases
ATGACAGACAACGTATTAGAACCACAGTTTGATAATTTTTTTGCCTTATTTGAGCAGCCTGTACAGTTTGAGGTTGTACA
AGACAATTTGGATCAGCGTTTACGTTTTTTGCAAAAACGCTATCATCCTGACAATGTCGCAAAAAATATAGCCAATATTG
CAAAAGCACAGCAGCAATCTGAGCAAGCATCAGCGCTTATTAATCAGGGCTATCAAACTCTGAGTTCGCCTGATAGTCGA
GCCAGCTACTTGTTAGATATGGCAGGTCAAGCGCAAAGTCTAGAGCATTCCATCGCAGATCTGGACTTCTTAGAAGATGC
TATGGAAATGCGCATGGATTTAGACGACGCTATTGGTGCTCAAGATATAGCAACGCTAAAGCAGTTACATCCACAGATTA
CAGAACGTCTAGCAAAGCAGTCAGCAAACTTTAAAAACGCTTATGAGACTCAAAACTGGCAAACCGCCATTGATTCTACC
CAAAAGCTGAAATTTCTGGTGAAGTTAAATGCTGACGTCGTGACAGCCATTGATGGAATGTCGGCAGCTACACATTTAGA
TGATGATGATTTATATGTGTAA

Upstream 100 bases:

>100_bases
GAAAGGCGAATGTGGCTGCGGTGAGTCTTTTACGGTGTAACCGTTTTTACTATACAAAATAGAAGTCCTTAAAATAATAA
ATAAAATAAAGGCAGACGAT

Downstream 100 bases:

>100_bases
TTAATGCGCTTATTAGTAGCGTTATTATTGAATATAATAATAACGGCTCAATTTATAATACGTTTCAAAAGTTTTAAAAA
GCGACGGTTAAAGTAAGAGC

Product: co-chaperone Hsc20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTDNVLEPQFDNFFALFEQPVQFEVVQDNLDQRLRFLQKRYHPDNVAKNIANIAKAQQQSEQASALINQGYQTLSSPDSR
ASYLLDMAGQAQSLEHSIADLDFLEDAMEMRMDLDDAIGAQDIATLKQLHPQITERLAKQSANFKNAYETQNWQTAIDST
QKLKFLVKLNADVVTAIDGMSAATHLDDDDLYV

Sequences:

>Translated_193_residues
MTDNVLEPQFDNFFALFEQPVQFEVVQDNLDQRLRFLQKRYHPDNVAKNIANIAKAQQQSEQASALINQGYQTLSSPDSR
ASYLLDMAGQAQSLEHSIADLDFLEDAMEMRMDLDDAIGAQDIATLKQLHPQITERLAKQSANFKNAYETQNWQTAIDST
QKLKFLVKLNADVVTAIDGMSAATHLDDDDLYV
>Mature_192_residues
TDNVLEPQFDNFFALFEQPVQFEVVQDNLDQRLRFLQKRYHPDNVAKNIANIAKAQQQSEQASALINQGYQTLSSPDSRA
SYLLDMAGQAQSLEHSIADLDFLEDAMEMRMDLDDAIGAQDIATLKQLHPQITERLAKQSANFKNAYETQNWQTAIDSTQ
KLKFLVKLNADVVTAIDGMSAATHLDDDDLYV

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Escherichia coli, GI1788876, Length=162, Percent_Identity=32.7160493827161, Blast_Score=82, Evalue=3e-17,
Organism=Drosophila melanogaster, GI161084223, Length=162, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640
- InterPro:   IPR015609 [H]

Pfam domain/function: PF00226 DnaJ; PF07743 HSCB_C [H]

EC number: NA

Molecular weight: Translated: 21799; Mature: 21668

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNVLEPQFDNFFALFEQPVQFEVVQDNLDQRLRFLQKRYHPDNVAKNIANIAKAQQQS
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EQASALINQGYQTLSSPDSRASYLLDMAGQAQSLEHSIADLDFLEDAMEMRMDLDDAIGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCH
QDIATLKQLHPQITERLAKQSANFKNAYETQNWQTAIDSTQKLKFLVKLNADVVTAIDGM
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHEECCHHHHHHCCC
SAATHLDDDDLYV
HHHHCCCCCCCCC
>Mature Secondary Structure 
TDNVLEPQFDNFFALFEQPVQFEVVQDNLDQRLRFLQKRYHPDNVAKNIANIAKAQQQS
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EQASALINQGYQTLSSPDSRASYLLDMAGQAQSLEHSIADLDFLEDAMEMRMDLDDAIGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCH
QDIATLKQLHPQITERLAKQSANFKNAYETQNWQTAIDSTQKLKFLVKLNADVVTAIDGM
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHEECCHHHHHHCCC
SAATHLDDDDLYV
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA