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The map label for this gene is 93006471

Identifier: 93006471

GI number: 93006471

Start: 2029799

End: 2030671

Strand: Direct

Name: 93006471

Synonym: Pcryo_1647

Alternate gene names: NA

Gene position: 2029799-2030671 (Clockwise)

Preceding gene: 93006470

Following gene: 93006472

Centisome position: 66.34

GC content: 46.96

Gene sequence:

>873_bases
ATGGCGTTATCTATATTGCAAGCGTTGTTGACTCAGCAGACGATTGAAGCTCAGTCCAAAAAACAGCCAAAGCATTTGCA
TACAGCTCTTTTAATTAGCGCTTGTTTTGGCATGCTAAGCTTGAGTGCTTGTCAGACTGCACCAACTTCAATAAAAGCGC
CTTCTGCTCAAACCTTCCCATCAACCAGTAGTCAAAAAACGACGCAACCTGAACAATCCACAATAGTGACGCAAACCCCT
CGCACTGATCATAGTGGTTATGAAAGTGTTGAGAGTACTGAAGCTGATAAGACTGACGATAATTATCCTATCGAGCCTTA
TCATCCACCTGCATCAATAGAGTCGCCAACGGAATCGGTAACAGAAAAGCCACCTGTAATCTTGGGGTCTAATCAAAGCA
CGAGTCAAACTCCGTTCGTAACTCAGCCTGATACCGTGATCCTCACGCCTGCTCGTGAAGATGAATTGATATATGTGCCA
TCTATCCCGTCGCATAATGAGCTACTAGAGCGTGCGCGGCAGAACTCGCAGCGCAGTCAGAAAACCACCAACAATAATAG
CAACTTGCCCGCCTTTCGTAACCTGATGCAAGTGGGCACTGAGCAATTAAAGGCAGGTAATCTCAATAGCGCTGAGAGCA
GCTTCACCCGAGCTCAGCGCCTAGCACCCAAATCATCAGCGGTATATTTTTATCTTGCGCAAGTGGCACTCAAAAAAAAC
CAGCCGCGTAAGGCTGAAGCAATGGGACGGCGTGGGCTTAGTGTTTCTCAAGACAGCAGTCGCCGCCGTGCGCTATGGCA
AATTATTCTACAGTCTGGACAAGCACAAGGTAATGCACGGGTGATAAAAGAAGCCAAACAAGCATTACGCTAA

Upstream 100 bases:

>100_bases
TGAACTGCTTCTATTTCAGTCGTGATAGCTGAAAATTTGACTTTAAAAGGTTAGTAGCTGAACGATTTTAAGATTTTTAA
AACTTAGAAAGGGTTTTAAT

Downstream 100 bases:

>100_bases
CCGTATTATCTTTTTGATTAACCATGACGACTGACTATATAAGCGCTAAAATAGGCTTTTATAGTCGGTCGTTAATTTTT
ATTATCTATTTTTTATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MALSILQALLTQQTIEAQSKKQPKHLHTALLISACFGMLSLSACQTAPTSIKAPSAQTFPSTSSQKTTQPEQSTIVTQTP
RTDHSGYESVESTEADKTDDNYPIEPYHPPASIESPTESVTEKPPVILGSNQSTSQTPFVTQPDTVILTPAREDELIYVP
SIPSHNELLERARQNSQRSQKTTNNNSNLPAFRNLMQVGTEQLKAGNLNSAESSFTRAQRLAPKSSAVYFYLAQVALKKN
QPRKAEAMGRRGLSVSQDSSRRRALWQIILQSGQAQGNARVIKEAKQALR

Sequences:

>Translated_290_residues
MALSILQALLTQQTIEAQSKKQPKHLHTALLISACFGMLSLSACQTAPTSIKAPSAQTFPSTSSQKTTQPEQSTIVTQTP
RTDHSGYESVESTEADKTDDNYPIEPYHPPASIESPTESVTEKPPVILGSNQSTSQTPFVTQPDTVILTPAREDELIYVP
SIPSHNELLERARQNSQRSQKTTNNNSNLPAFRNLMQVGTEQLKAGNLNSAESSFTRAQRLAPKSSAVYFYLAQVALKKN
QPRKAEAMGRRGLSVSQDSSRRRALWQIILQSGQAQGNARVIKEAKQALR
>Mature_289_residues
ALSILQALLTQQTIEAQSKKQPKHLHTALLISACFGMLSLSACQTAPTSIKAPSAQTFPSTSSQKTTQPEQSTIVTQTPR
TDHSGYESVESTEADKTDDNYPIEPYHPPASIESPTESVTEKPPVILGSNQSTSQTPFVTQPDTVILTPAREDELIYVPS
IPSHNELLERARQNSQRSQKTTNNNSNLPAFRNLMQVGTEQLKAGNLNSAESSFTRAQRLAPKSSAVYFYLAQVALKKNQ
PRKAEAMGRRGLSVSQDSSRRRALWQIILQSGQAQGNARVIKEAKQALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31799; Mature: 31668

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSILQALLTQQTIEAQSKKQPKHLHTALLISACFGMLSLSACQTAPTSIKAPSAQTFP
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
STSSQKTTQPEQSTIVTQTPRTDHSGYESVESTEADKTDDNYPIEPYHPPASIESPTESV
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TEKPPVILGSNQSTSQTPFVTQPDTVILTPAREDELIYVPSIPSHNELLERARQNSQRSQ
HCCCCEEECCCCCCCCCCCEECCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
KTTNNNSNLPAFRNLMQVGTEQLKAGNLNSAESSFTRAQRLAPKSSAVYFYLAQVALKKN
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
QPRKAEAMGRRGLSVSQDSSRRRALWQIILQSGQAQGNARVIKEAKQALR
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSILQALLTQQTIEAQSKKQPKHLHTALLISACFGMLSLSACQTAPTSIKAPSAQTFP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
STSSQKTTQPEQSTIVTQTPRTDHSGYESVESTEADKTDDNYPIEPYHPPASIESPTESV
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TEKPPVILGSNQSTSQTPFVTQPDTVILTPAREDELIYVPSIPSHNELLERARQNSQRSQ
HCCCCEEECCCCCCCCCCCEECCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
KTTNNNSNLPAFRNLMQVGTEQLKAGNLNSAESSFTRAQRLAPKSSAVYFYLAQVALKKN
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
QPRKAEAMGRRGLSVSQDSSRRRALWQIILQSGQAQGNARVIKEAKQALR
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA