Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006083
Identifier: 93006083
GI number: 93006083
Start: 1525068
End: 1525604
Strand: Reverse
Name: 93006083
Synonym: Pcryo_1255
Alternate gene names: NA
Gene position: 1525604-1525068 (Counterclockwise)
Preceding gene: 93006085
Following gene: 93006082
Centisome position: 49.86
GC content: 41.34
Gene sequence:
>537_bases ATGCCATCAAATTACGGACAAAGAATTCAAGCTGGTGTCAAATTCCCCGATATAAACGTACAGATGCTAAATGGTGATAT AAAGTCACTAGGTACGCCTGATAATGGTCATGACTGGAAATTGGTCGTGGTGTATCGAGGTCAACATTGTCCGATATGTA CTAAATACCTCAACCAGTTAGAAACCGTAAAATCGTCATTTGCTGATGCGGGTGTCGATATCATTGCAGTATCAGGTGAT AGTAAAGAGCAATTAGAGAGTCATTTAGAAAAATTAGATATCGACTTCCCTGTTGCCTATGGTCTGACTGTTGAGCAGAT GAATACGTTAGGACTTTATATCTCAGAGCCACGTTCAGAGAAAGAGACCGATCATCCCTTTGCAGAGCCTGGTGTATTTG TGGTTAATGCTGATGGAGAAATTCAAATCGTTGATATCTCCAACGCACCTTTTGCTAGACCTGAACTTGAAGCCCTTGCG AATGGTTTAGCCTTTATTCGAAAAAATGACTACCCTATTCGCGGTACGCATCGTTAG
Upstream 100 bases:
>100_bases TGATTACTCAAATATATCTTGAACATTTATTTTAGTCCAGTTAAGATGATCATTGCTATATAAATTACTCCTACTTATAA ACACTTCTAAAGGATAAATC
Downstream 100 bases:
>100_bases ACTCACTGTAAAAAATAATCCTTAATGACTGCATGAGTCTTTAAGGATTATTTGTATTTTTCATTGCTTTTATGATTGTC AAACTAAGACCTCAACACGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Thioredoxin Peroxidase; Redoxin Domain-Containing Protein; AhpC/TSA Family Protein; Antioxidant AhpC/TSA Family; Peroxiredoxin
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPSNYGQRIQAGVKFPDINVQMLNGDIKSLGTPDNGHDWKLVVVYRGQHCPICTKYLNQLETVKSSFADAGVDIIAVSGD SKEQLESHLEKLDIDFPVAYGLTVEQMNTLGLYISEPRSEKETDHPFAEPGVFVVNADGEIQIVDISNAPFARPELEALA NGLAFIRKNDYPIRGTHR
Sequences:
>Translated_178_residues MPSNYGQRIQAGVKFPDINVQMLNGDIKSLGTPDNGHDWKLVVVYRGQHCPICTKYLNQLETVKSSFADAGVDIIAVSGD SKEQLESHLEKLDIDFPVAYGLTVEQMNTLGLYISEPRSEKETDHPFAEPGVFVVNADGEIQIVDISNAPFARPELEALA NGLAFIRKNDYPIRGTHR >Mature_177_residues PSNYGQRIQAGVKFPDINVQMLNGDIKSLGTPDNGHDWKLVVVYRGQHCPICTKYLNQLETVKSSFADAGVDIIAVSGDS KEQLESHLEKLDIDFPVAYGLTVEQMNTLGLYISEPRSEKETDHPFAEPGVFVVNADGEIQIVDISNAPFARPELEALAN GLAFIRKNDYPIRGTHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19699; Mature: 19568
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNYGQRIQAGVKFPDINVQMLNGDIKSLGTPDNGHDWKLVVVYRGQHCPICTKYLNQL CCCCCCCHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH ETVKSSFADAGVDIIAVSGDSKEQLESHLEKLDIDFPVAYGLTVEQMNTLGLYISEPRSE HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCEECCCCHHHHCEEEEEEECCCCC KETDHPFAEPGVFVVNADGEIQIVDISNAPFARPELEALANGLAFIRKNDYPIRGTHR CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCC >Mature Secondary Structure PSNYGQRIQAGVKFPDINVQMLNGDIKSLGTPDNGHDWKLVVVYRGQHCPICTKYLNQL CCCCCCHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH ETVKSSFADAGVDIIAVSGDSKEQLESHLEKLDIDFPVAYGLTVEQMNTLGLYISEPRSE HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCEECCCCHHHHCEEEEEEECCCCC KETDHPFAEPGVFVVNADGEIQIVDISNAPFARPELEALANGLAFIRKNDYPIRGTHR CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA