Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is thiE [H]
Identifier: 93005509
GI number: 93005509
Start: 806090
End: 806770
Strand: Direct
Name: thiE [H]
Synonym: Pcryo_0679
Alternate gene names: 93005509
Gene position: 806090-806770 (Clockwise)
Preceding gene: 93005508
Following gene: 93005511
Centisome position: 26.34
GC content: 42.73
Gene sequence:
>681_bases ATGATTCAGTCATCAGTCTCTACGGTTTCTCATACTATACCTAAGCTATATTTGCTGACTAATGATGATGAGTTTAGCCT TTTATATCAAAAGTTAGAAGCCGCTTTAGCAACAGGATTGATTGCTCTTTTACAAATACGTCGTAAGCAGATATTAGCAT TGCCTGACGGCGAATCTGTTCTTTATAAAGAGGCGCTACAAATCGTTAATTTGGCTAAAACCTACAATGTGCCAGTATTG ATAAATGACAATATTGCTTTGGCCGAAAAACTTGGTATCGGCGTGCATTTGGGACAGCAAGATGGTGATCTTAGTGAGGC AACACAATCTTTAGCCCCGAATCAAATCATTGGTCGCACTTGTCATGGCGATATAACGCTAGTCAAAGCTGCGAAAACTG AAGGCGCAAGCTATGCCGCCATGGGTGCAATCTTTGCTTCAACGACCAAGCCCAATGCTGCCACTATCTTACGCCAGCAA CTGATAGAAGGCTGCCAGCAAGATATAAAAATATGCGTGATAGGCGGTTTAACGGCAGAAAACATCTCAGAGCTGGCAGG GTTACCTATTGCTTATATAGCAATCGTTGGCGATATCATGGATTTACCTGTCCATCAAATCGCAACGCGTTGTCAGCAGT GGCAGCAAGTACTTAATAAGTGGAATGTGCCTGCTGAATGA
Upstream 100 bases:
>100_bases AAACGCGCAGTATCAAAAGACATTTATAATAAAAAGGCTGTTATGTGATATAACAGCCTTTTTATTATGTCAAAAACGTA TTGATGTTAAGGAGCATTAC
Downstream 100 bases:
>100_bases ATACTATTTTAAAATATAAGTACGAATTTATTCAGCGTGCTGCATACATAAAGTTGCATAAGGCAATGCTTGCAAGCGCT GTGCTTCGATAGGCTCAGCG
Product: thiamine-phosphate diphosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIQSSVSTVSHTIPKLYLLTNDDEFSLLYQKLEAALATGLIALLQIRRKQILALPDGESVLYKEALQIVNLAKTYNVPVL INDNIALAEKLGIGVHLGQQDGDLSEATQSLAPNQIIGRTCHGDITLVKAAKTEGASYAAMGAIFASTTKPNAATILRQQ LIEGCQQDIKICVIGGLTAENISELAGLPIAYIAIVGDIMDLPVHQIATRCQQWQQVLNKWNVPAE
Sequences:
>Translated_226_residues MIQSSVSTVSHTIPKLYLLTNDDEFSLLYQKLEAALATGLIALLQIRRKQILALPDGESVLYKEALQIVNLAKTYNVPVL INDNIALAEKLGIGVHLGQQDGDLSEATQSLAPNQIIGRTCHGDITLVKAAKTEGASYAAMGAIFASTTKPNAATILRQQ LIEGCQQDIKICVIGGLTAENISELAGLPIAYIAIVGDIMDLPVHQIATRCQQWQQVLNKWNVPAE >Mature_226_residues MIQSSVSTVSHTIPKLYLLTNDDEFSLLYQKLEAALATGLIALLQIRRKQILALPDGESVLYKEALQIVNLAKTYNVPVL INDNIALAEKLGIGVHLGQQDGDLSEATQSLAPNQIIGRTCHGDITLVKAAKTEGASYAAMGAIFASTTKPNAATILRQQ LIEGCQQDIKICVIGGLTAENISELAGLPIAYIAIVGDIMDLPVHQIATRCQQWQQVLNKWNVPAE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325042, Length=218, Percent_Identity=29.3577981651376, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24369; Mature: 24369
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSSVSTVSHTIPKLYLLTNDDEFSLLYQKLEAALATGLIALLQIRRKQILALPDGESV CCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH LYKEALQIVNLAKTYNVPVLINDNIALAEKLGIGVHLGQQDGDLSEATQSLAPNQIIGRT HHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCEEEECCCCCCHHHHHHHCCCCHHHCCC CHGDITLVKAAKTEGASYAAMGAIFASTTKPNAATILRQQLIEGCQQDIKICVIGGLTAE CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHH NISELAGLPIAYIAIVGDIMDLPVHQIATRCQQWQQVLNKWNVPAE HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIQSSVSTVSHTIPKLYLLTNDDEFSLLYQKLEAALATGLIALLQIRRKQILALPDGESV CCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH LYKEALQIVNLAKTYNVPVLINDNIALAEKLGIGVHLGQQDGDLSEATQSLAPNQIIGRT HHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCEEEECCCCCCHHHHHHHCCCCHHHCCC CHGDITLVKAAKTEGASYAAMGAIFASTTKPNAATILRQQLIEGCQQDIKICVIGGLTAE CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHH NISELAGLPIAYIAIVGDIMDLPVHQIATRCQQWQQVLNKWNVPAE HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA