Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005481
Identifier: 93005481
GI number: 93005481
Start: 770299
End: 771114
Strand: Direct
Name: 93005481
Synonym: Pcryo_0651
Alternate gene names: NA
Gene position: 770299-771114 (Clockwise)
Preceding gene: 93005480
Following gene: 93005482
Centisome position: 25.17
GC content: 45.59
Gene sequence:
>816_bases ATGACCACCCCATCATCAAACACAAACTTTAACGCTCAGGGATCATTTGGTGCCATGTTGCAGCAAGCTCGCAAAGCTAA GCAAGTAAGCTTGGATGACGCGGCAAATGAATTGTTTATTTTAAAACGTCACCTGCAAGCGTTAGAAAATGAAGATTTTT CTGACTTGCCGCAAGTGGCGTTTGCGCGCGGTTTTGCGATCAACTATGCCAAATATTTGGGTCTCGACCCAGTCAGAATA GCCAGTAGCTTTGATGCCGCTTACCCAAATGAGCTGAAATCGCGTTCGGCTAATAATACTCAGTCGCCATTGCAGCCTAT GGGTACGCTACAGCGCGATACACACAATCGTATTCGCTTTAATCCGCTACTAATTATCGCAGTGATCGGTGTCATTATTT TAGCGATTTTCCTATTCCGTATGGTTAGTAATGCCAGCAAGGAAAATACCGAGCAGCCTATATCTAGCTCTGAAGATATC TCAGCAGTAGAACAAGCACAAGGCGCAGCTATTAATACCGATGTTACAGGTGTTAGCGCTTCAGGTTCAGCACTAAACTT AGGCGGTGGCGACGTTGCTCCTGCCACTTTGGATGTTAAGCTGACGGATGCTGCTGTCGTCACTATTACGGATGCTACTG GTAGCAGCTTGATCGCGGGCTCGCAGAATGCGGGTGATTATCAGTTATCAGGTATGCCACCTTTTAATGTACAGATCGAT GATATCAATAACGTGCGCCTGATGCTTAATCAGCAATCTGTCGCTTTAAACAGCTATGCAAATGGTAGCCAAGCCAGTTT TGAATTGGCACCTTAA
Upstream 100 bases:
>100_bases CACGCCAACAATTGGCACAGCAACTTTTATCTGCTTATCCATTAAGTGATGAAGCAAAACAACTAAAGACTTGGCTTAAC AATCCAGAGGCACCATGGAA
Downstream 100 bases:
>100_bases TTTATTAATTGGTTCGGTTTTTAAAGTAAATAGTATTACCTTGTTTTTATTGTTATTCTCGTTTTTACTGCTTTCATGAA AGGGTTTGTCTATGTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTTPSSNTNFNAQGSFGAMLQQARKAKQVSLDDAANELFILKRHLQALENEDFSDLPQVAFARGFAINYAKYLGLDPVRI ASSFDAAYPNELKSRSANNTQSPLQPMGTLQRDTHNRIRFNPLLIIAVIGVIILAIFLFRMVSNASKENTEQPISSSEDI SAVEQAQGAAINTDVTGVSASGSALNLGGGDVAPATLDVKLTDAAVVTITDATGSSLIAGSQNAGDYQLSGMPPFNVQID DINNVRLMLNQQSVALNSYANGSQASFELAP
Sequences:
>Translated_271_residues MTTPSSNTNFNAQGSFGAMLQQARKAKQVSLDDAANELFILKRHLQALENEDFSDLPQVAFARGFAINYAKYLGLDPVRI ASSFDAAYPNELKSRSANNTQSPLQPMGTLQRDTHNRIRFNPLLIIAVIGVIILAIFLFRMVSNASKENTEQPISSSEDI SAVEQAQGAAINTDVTGVSASGSALNLGGGDVAPATLDVKLTDAAVVTITDATGSSLIAGSQNAGDYQLSGMPPFNVQID DINNVRLMLNQQSVALNSYANGSQASFELAP >Mature_270_residues TTPSSNTNFNAQGSFGAMLQQARKAKQVSLDDAANELFILKRHLQALENEDFSDLPQVAFARGFAINYAKYLGLDPVRIA SSFDAAYPNELKSRSANNTQSPLQPMGTLQRDTHNRIRFNPLLIIAVIGVIILAIFLFRMVSNASKENTEQPISSSEDIS AVEQAQGAAINTDVTGVSASGSALNLGGGDVAPATLDVKLTDAAVVTITDATGSSLIAGSQNAGDYQLSGMPPFNVQIDD INNVRLMLNQQSVALNSYANGSQASFELAP
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28783; Mature: 28651
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSSNTNFNAQGSFGAMLQQARKAKQVSLDDAANELFILKRHLQALENEDFSDLPQVA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FARGFAINYAKYLGLDPVRIASSFDAAYPNELKSRSANNTQSPLQPMGTLQRDTHNRIRF HHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEE NPLLIIAVIGVIILAIFLFRMVSNASKENTEQPISSSEDISAVEQAQGAAINTDVTGVSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEC SGSALNLGGGDVAPATLDVKLTDAAVVTITDATGSSLIAGSQNAGDYQLSGMPPFNVQID CCCEEECCCCCCCCEEEEEEEECEEEEEEECCCCCEEEECCCCCCCEEECCCCCCCEEEC DINNVRLMLNQQSVALNSYANGSQASFELAP CCCCEEEEEECCCEEECCCCCCCCCEEEECC >Mature Secondary Structure TTPSSNTNFNAQGSFGAMLQQARKAKQVSLDDAANELFILKRHLQALENEDFSDLPQVA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FARGFAINYAKYLGLDPVRIASSFDAAYPNELKSRSANNTQSPLQPMGTLQRDTHNRIRF HHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEE NPLLIIAVIGVIILAIFLFRMVSNASKENTEQPISSSEDISAVEQAQGAAINTDVTGVSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEC SGSALNLGGGDVAPATLDVKLTDAAVVTITDATGSSLIAGSQNAGDYQLSGMPPFNVQID CCCEEECCCCCCCCEEEEEEEECEEEEEEECCCCCEEEECCCCCCCEEECCCCCCCEEEC DINNVRLMLNQQSVALNSYANGSQASFELAP CCCCEEEEEECCCEEECCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA