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The map label for this gene is 93005480

Identifier: 93005480

GI number: 93005480

Start: 769349

End: 770302

Strand: Direct

Name: 93005480

Synonym: Pcryo_0650

Alternate gene names: NA

Gene position: 769349-770302 (Clockwise)

Preceding gene: 93005479

Following gene: 93005481

Centisome position: 25.14

GC content: 43.82

Gene sequence:

>954_bases
ATGATGGTAGCCATGATGACTTCTAAAAACTCTTATCAGTTCAACTATAAAAGACCCTTTTATCCTGTGATAAAACGATT
AGGCTCTACAGTCTTTCATGCTAATAAAAAGCGTGCTTACGTTGTAGGCATCTTTAGTATGTTGTTGTCTGGATTCTTGG
TTGGCTGTCAAAGTACGCCAACCAATGATTTAATCAGTGGTACCCCTTATCAAACCTCAACGCAACCCAATGACAACCGT
AAATTGGATCAGCAAGAAATTGCTCGCGTTCGAACGACACTTGCTGCACAATATATCCGCAAAAACGAGCTTGATGCTGC
CCAAAGACAGCTCGAAAAAGCCTTTGCTGCCGATAGCCGTCATGCGCCCGCCTATGATATGATGGGCGTTTTGTTGCAGC
AAGAAGGCAGCCGTCTTAATCTTGAAAAAGCGGATCAATATTTCAAAAAAGCCATTGCGCTCGATAAAGATTTTGACCAA
GCTCACAATAATTATGGCGTGTATTTATCGCAGATGAAGCGTTATAAAGAGGCAGCTGAGCAGTTTGAAATCGCAGGTGC
TGCCCTTGGTTACGAAGGTCGTATTGGGGCGTTAGAGAACTTAGGTCGCACCTACCTTCAGCTCAATGACCATCCTGCCG
CAGCAAAGGCTTTTTTACGTGCTCTAGATGGCAATCGAAATAGTGTTATTGCCCATATTGAACTGGTTGATTTATTACTT
GAGCAGCAGCGTATTGAGCAGGCACAAAGGCTCTATGATGAGACCTTGATATTGGTACAAGGGCAGGGCGCTAGTCCGCG
CTTGCTCCTACAAGGCATCAAATTGGCAGCAGCGCAAAAAAACATCAAGACACGCCAACAATTGGCACAGCAACTTTTAT
CTGCTTATCCATTAAGTGATGAAGCAAAACAACTAAAGACTTGGCTTAACAATCCAGAGGCACCATGGAAATGA

Upstream 100 bases:

>100_bases
GCTTTTGCTCTTAGAATCCTCCACTTGAGCAATGCGAAAGTGGGGTGAGTATGTCAATAAACTGATGCCTCGATGATCGA
ACGCATTGAATTATAGTTTT

Downstream 100 bases:

>100_bases
CCACCCCATCATCAAACACAAACTTTAACGCTCAGGGATCATTTGGTGCCATGTTGCAGCAAGCTCGCAAAGCTAAGCAA
GTAAGCTTGGATGACGCGGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Biogenesis Protein PilF; Pilus Assembly Protein; PilF Type IV Pilus Assembly Protein; Type IV Pili Biogenesis Protein PilF; TPR Repeat-Containing Pilus Assembly Protein PilF; Type IV Pilus Biogenesis Protein; TPR Repeat-Containing Protein; Fimbrial Biogenesis Protein; Type 4 Fimbrial Biogenesis Protein PilF; Tfp Pilus Assembly Protein PilF; Fimbrial Biogenesis And Twitching Motility Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MMVAMMTSKNSYQFNYKRPFYPVIKRLGSTVFHANKKRAYVVGIFSMLLSGFLVGCQSTPTNDLISGTPYQTSTQPNDNR
KLDQQEIARVRTTLAAQYIRKNELDAAQRQLEKAFAADSRHAPAYDMMGVLLQQEGSRLNLEKADQYFKKAIALDKDFDQ
AHNNYGVYLSQMKRYKEAAEQFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLLL
EQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLSDEAKQLKTWLNNPEAPWK

Sequences:

>Translated_317_residues
MMVAMMTSKNSYQFNYKRPFYPVIKRLGSTVFHANKKRAYVVGIFSMLLSGFLVGCQSTPTNDLISGTPYQTSTQPNDNR
KLDQQEIARVRTTLAAQYIRKNELDAAQRQLEKAFAADSRHAPAYDMMGVLLQQEGSRLNLEKADQYFKKAIALDKDFDQ
AHNNYGVYLSQMKRYKEAAEQFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLLL
EQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLSDEAKQLKTWLNNPEAPWK
>Mature_317_residues
MMVAMMTSKNSYQFNYKRPFYPVIKRLGSTVFHANKKRAYVVGIFSMLLSGFLVGCQSTPTNDLISGTPYQTSTQPNDNR
KLDQQEIARVRTTLAAQYIRKNELDAAQRQLEKAFAADSRHAPAYDMMGVLLQQEGSRLNLEKADQYFKKAIALDKDFDQ
AHNNYGVYLSQMKRYKEAAEQFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLLL
EQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLSDEAKQLKTWLNNPEAPWK

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35802; Mature: 35802

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVAMMTSKNSYQFNYKRPFYPVIKRLGSTVFHANKKRAYVVGIFSMLLSGFLVGCQSTP
CEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
TNDLISGTPYQTSTQPNDNRKLDQQEIARVRTTLAAQYIRKNELDAAQRQLEKAFAADSR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HAPAYDMMGVLLQQEGSRLNLEKADQYFKKAIALDKDFDQAHNNYGVYLSQMKRYKEAAE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH
QFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLLL
HHHHHHHHCCCCCCCHHHHHCCHHEEEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHH
EQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLSD
HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EAKQLKTWLNNPEAPWK
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMVAMMTSKNSYQFNYKRPFYPVIKRLGSTVFHANKKRAYVVGIFSMLLSGFLVGCQSTP
CEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
TNDLISGTPYQTSTQPNDNRKLDQQEIARVRTTLAAQYIRKNELDAAQRQLEKAFAADSR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HAPAYDMMGVLLQQEGSRLNLEKADQYFKKAIALDKDFDQAHNNYGVYLSQMKRYKEAAE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHH
QFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLLL
HHHHHHHHCCCCCCCHHHHHCCHHEEEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHH
EQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLSD
HHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EAKQLKTWLNNPEAPWK
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA