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The map label for this gene is yfbE [C]

Identifier: 93005448

GI number: 93005448

Start: 735363

End: 736481

Strand: Direct

Name: yfbE [C]

Synonym: Pcryo_0618

Alternate gene names: 93005448

Gene position: 735363-736481 (Clockwise)

Preceding gene: 93005447

Following gene: 93005449

Centisome position: 24.03

GC content: 37.35

Gene sequence:

>1119_bases
ATGATTAAGCTCTCACAGCCTACAATTCCAGAAGCAGCAATTGAGCGTGTTAGTGAAATTCTACGAAGTGGGCAACTTGT
TCATGGTGAAGAATGTGAAAGCTTTGAACAAGAATTAGCGAGTTTTCTTGGTGTAAAGCACGCTTTAGTGGTAAGTAACG
GTACTGCTGCACTCCATCTCGCTTTATTAGCTTTAGACATTGGAGTTGGCGATGCTGTTATCGTCCCTGACTTCACCTTT
GCTGCTACTGCTAATATCGTAGAAATGACAGGTGCTAAAGCCATTATCGTTGATGTGGATATCGAAACTTACAATATGGA
TTCTGAGCTATTAGAGTCTTGTATTCAATCATGGTCTGGCCCTGAAAAACTAAAAGCGATTATGCCTGTTTTAGAATTTG
GCAATCCTCATGGACTAAAAAAGTATCGTGAAATTGCTAATAAATATAATTTAGCATTGATAGAAGATGCAGCTTGTGCT
TTAGGCGCAAAAGAACAAGATGTCATGGTTGGAACCGTAGGGGATATGGGGTGTTTTTCATTCCATCCTCGAAAAACTCT
GACAACAGGTGAGGGTGGCGCTTTAGTGACTAATAATGATCAGCTTTATGAGAAGGCGAAGCTATTAAGAAGTCACGGAA
TGATGCGTGGTGAGTTTGGTATAGAGTTTAGATGTATTGGCCTAAACTACAGACTTACTAATTTTCAAGCAGCTATTGGT
AGAGCAATATTACCTAAACTGAACGGTTGGATAGAAAGAAGACGTGAATTAGCTACTATTTATGAAGATGCGCTAGCTCC
TTTAGAGCAGCAAGGATTAATTCGGTTACCTAAAATAGTTGAAGGGCACAGTGTTCAAACTTATATGATAGTGCTTTCTG
ATCAGTTTAATAGAACTGAAGTAATGAAAGCGTTGAAAGAGGGTGGCATTGAATCCAGTTTAGGCGCTCAAAGTATGAGT
GAGTTGAAATTATTCAACCATGATAGTAATACTAAATCTAACTATATTATTGGTCCTAAATTATATATATATGGTTTGGC
ATTACCATTACATGAGCATCTAAATATAGATGATGTAAATAAAATTACAGAAACCCTTGAACAGATTTTATTAAAATGA

Upstream 100 bases:

>100_bases
GTAGACTTAGAAGAAGGTTTAATTCGTACAGCAGACTGGCTATCAGCTAATATGAATGATTTGCCAGTAATGCCAGATAT
GTTTTTGAAGGAAAAATAAT

Downstream 100 bases:

>100_bases
TTTTATTAAAAGAATTAAAGGAATTGTTTTTCTTACGTACTACATATTACTTAAAAAAATACAATCGTTCTCTTCCATTT
GGGGACATGATCGTTGATCG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MIKLSQPTIPEAAIERVSEILRSGQLVHGEECESFEQELASFLGVKHALVVSNGTAALHLALLALDIGVGDAVIVPDFTF
AATANIVEMTGAKAIIVDVDIETYNMDSELLESCIQSWSGPEKLKAIMPVLEFGNPHGLKKYREIANKYNLALIEDAACA
LGAKEQDVMVGTVGDMGCFSFHPRKTLTTGEGGALVTNNDQLYEKAKLLRSHGMMRGEFGIEFRCIGLNYRLTNFQAAIG
RAILPKLNGWIERRRELATIYEDALAPLEQQGLIRLPKIVEGHSVQTYMIVLSDQFNRTEVMKALKEGGIESSLGAQSMS
ELKLFNHDSNTKSNYIIGPKLYIYGLALPLHEHLNIDDVNKITETLEQILLK

Sequences:

>Translated_372_residues
MIKLSQPTIPEAAIERVSEILRSGQLVHGEECESFEQELASFLGVKHALVVSNGTAALHLALLALDIGVGDAVIVPDFTF
AATANIVEMTGAKAIIVDVDIETYNMDSELLESCIQSWSGPEKLKAIMPVLEFGNPHGLKKYREIANKYNLALIEDAACA
LGAKEQDVMVGTVGDMGCFSFHPRKTLTTGEGGALVTNNDQLYEKAKLLRSHGMMRGEFGIEFRCIGLNYRLTNFQAAIG
RAILPKLNGWIERRRELATIYEDALAPLEQQGLIRLPKIVEGHSVQTYMIVLSDQFNRTEVMKALKEGGIESSLGAQSMS
ELKLFNHDSNTKSNYIIGPKLYIYGLALPLHEHLNIDDVNKITETLEQILLK
>Mature_372_residues
MIKLSQPTIPEAAIERVSEILRSGQLVHGEECESFEQELASFLGVKHALVVSNGTAALHLALLALDIGVGDAVIVPDFTF
AATANIVEMTGAKAIIVDVDIETYNMDSELLESCIQSWSGPEKLKAIMPVLEFGNPHGLKKYREIANKYNLALIEDAACA
LGAKEQDVMVGTVGDMGCFSFHPRKTLTTGEGGALVTNNDQLYEKAKLLRSHGMMRGEFGIEFRCIGLNYRLTNFQAAIG
RAILPKLNGWIERRRELATIYEDALAPLEQQGLIRLPKIVEGHSVQTYMIVLSDQFNRTEVMKALKEGGIESSLGAQSMS
ELKLFNHDSNTKSNYIIGPKLYIYGLALPLHEHLNIDDVNKITETLEQILLK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=387, Percent_Identity=32.8165374677003, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI2367285, Length=320, Percent_Identity=34.375, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40985; Mature: 40985

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSQPTIPEAAIERVSEILRSGQLVHGEECESFEQELASFLGVKHALVVSNGTAALHL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
ALLALDIGVGDAVIVPDFTFAATANIVEMTGAKAIIVDVDIETYNMDSELLESCIQSWSG
HHHHHHCCCCCEEEECCCHHHHHCCHHEECCCEEEEEEEECEEECCCHHHHHHHHHHCCC
PEKLKAIMPVLEFGNPHGLKKYREIANKYNLALIEDAACALGAKEQDVMVGTVGDMGCFS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECHHHHCCCCCCCEEEECCCCCCCCC
FHPRKTLTTGEGGALVTNNDQLYEKAKLLRSHGMMRGEFGIEFRCIGLNYRLTNFQAAIG
CCCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEECHHHHHHH
RAILPKLNGWIERRRELATIYEDALAPLEQQGLIRLPKIVEGHSVQTYMIVLSDQFNRTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEECCHHHCCCCCEEEEEEEECCCCHHH
VMKALKEGGIESSLGAQSMSELKLFNHDSNTKSNYIIGPKLYIYGLALPLHEHLNIDDVN
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCEEEEEEEEHHHHHCCCCCHHH
KITETLEQILLK
HHHHHHHHHHCC
>Mature Secondary Structure
MIKLSQPTIPEAAIERVSEILRSGQLVHGEECESFEQELASFLGVKHALVVSNGTAALHL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
ALLALDIGVGDAVIVPDFTFAATANIVEMTGAKAIIVDVDIETYNMDSELLESCIQSWSG
HHHHHHCCCCCEEEECCCHHHHHCCHHEECCCEEEEEEEECEEECCCHHHHHHHHHHCCC
PEKLKAIMPVLEFGNPHGLKKYREIANKYNLALIEDAACALGAKEQDVMVGTVGDMGCFS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECHHHHCCCCCCCEEEECCCCCCCCC
FHPRKTLTTGEGGALVTNNDQLYEKAKLLRSHGMMRGEFGIEFRCIGLNYRLTNFQAAIG
CCCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEECHHHHHHH
RAILPKLNGWIERRRELATIYEDALAPLEQQGLIRLPKIVEGHSVQTYMIVLSDQFNRTE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEECCHHHCCCCCEEEEEEEECCCCHHH
VMKALKEGGIESSLGAQSMSELKLFNHDSNTKSNYIIGPKLYIYGLALPLHEHLNIDDVN
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCEEEEEEEEHHHHHCCCCCHHH
KITETLEQILLK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]