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The map label for this gene is degT [H]

Identifier: 93005446

GI number: 93005446

Start: 733257

End: 734333

Strand: Direct

Name: degT [H]

Synonym: Pcryo_0616

Alternate gene names: 93005446

Gene position: 733257-734333 (Clockwise)

Preceding gene: 93005445

Following gene: 93005447

Centisome position: 23.96

GC content: 42.34

Gene sequence:

>1077_bases
ATGATGCAGTTTATTGATTTAGTCGCTCAGCAGGATAGGATAAAAGATAAATTAAATACCAATATCCAAAAGGTATTGGC
TCATGGTCAATATATTTTAGGCCCTGAGGTTCATGAGCTTGAAGAAAAGCTGTCAGCATATACAGGTGCTAAATATTGCA
TCACTTGTGCCAATGGGACTGATGCGCTACAAATCGCCCAGATGGTATTTGGTATAGGGCCTGGAGACGAGGTAATCACG
CCAGGATTTACTTATATTGCGACAGCAGAGACGGTTGCTGTACTAGGTGCCAAACCTATCTATGTAGATATCAATCCAAA
GACTTATAACCTAGATGTCGAGCAGCTTGAAGCTGCTATTACGCCACGTACCAAAGCCATTATTGGGGTTAGTCTTTATG
GGCAGTGCGCAGACTATGATGCTATTAATGCTATCGCAGCGAAATATAATATTCCGGTCATTGAAGATGCCGCGCAGAGC
TTTGGTGCTAGCTATAAAGGTAGAAAGTCTTGTAATTTAACGACGATTGCCTGTACTAGCTTTTTCCCTAGTAAGCCGCT
AGGTTGCTACGGTGATGGTGGTGCTATCTTTACCAGTGATGAGGCGCTAGCGACTGTAATGCGCCAAATAGCACGCCATG
GTCAAGATCGCCGCTATCATCATATCCGAGTAGGAGTTAATAGTCGTTTAGATACCTTACAAGCCGCAATACTGCTGCCT
AAGCTTGAAATCCTAGATGATGAGATGCAAGTACGGCAACGTGTGGCAGAGACTTATAACCAGTTCTTTATTGAAGCGGA
TATTACGACGATACCATTTATCGAATCACACAATCAGAGTGCGTGGGCGCAATATACTATCCAAGTTGATAATCGTGATG
AGATACAAGCTAAGCTAAGAGAGCAAGGTATCCCGACAGCAGTACATTATCCTATTCCTTTAAATAAGCAGCCTGCGGTT
GCTGATACAAATGCAGTATTACCAGTAGGTGATGAAGTTGCTGAGCGAGTGATGAGTTTGCCGATGCACCCATATATGCA
AACTACAGATATTAAAACTATTTGTAATTCATTTTAA

Upstream 100 bases:

>100_bases
CAAAGAAAATAGGAACGAATGATAAAGGTATTGAGAAAAGTGGGATTGACGAAAGAGCAATGGCTACTATACAAGAAGAA
TTCAACGCAAGAAGGTAATG

Downstream 100 bases:

>100_bases
ATTTTAAATAACCAAAGAGATAACTAATGATTGAACTTACGGGCAAGAAAATATTCATCACAGGTGGTGCGGGATTTATT
GGATCAACTCTAATCGGTAG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MMQFIDLVAQQDRIKDKLNTNIQKVLAHGQYILGPEVHELEEKLSAYTGAKYCITCANGTDALQIAQMVFGIGPGDEVIT
PGFTYIATAETVAVLGAKPIYVDINPKTYNLDVEQLEAAITPRTKAIIGVSLYGQCADYDAINAIAAKYNIPVIEDAAQS
FGASYKGRKSCNLTTIACTSFFPSKPLGCYGDGGAIFTSDEALATVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP
KLEILDDEMQVRQRVAETYNQFFIEADITTIPFIESHNQSAWAQYTIQVDNRDEIQAKLREQGIPTAVHYPIPLNKQPAV
ADTNAVLPVGDEVAERVMSLPMHPYMQTTDIKTICNSF

Sequences:

>Translated_358_residues
MMQFIDLVAQQDRIKDKLNTNIQKVLAHGQYILGPEVHELEEKLSAYTGAKYCITCANGTDALQIAQMVFGIGPGDEVIT
PGFTYIATAETVAVLGAKPIYVDINPKTYNLDVEQLEAAITPRTKAIIGVSLYGQCADYDAINAIAAKYNIPVIEDAAQS
FGASYKGRKSCNLTTIACTSFFPSKPLGCYGDGGAIFTSDEALATVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP
KLEILDDEMQVRQRVAETYNQFFIEADITTIPFIESHNQSAWAQYTIQVDNRDEIQAKLREQGIPTAVHYPIPLNKQPAV
ADTNAVLPVGDEVAERVMSLPMHPYMQTTDIKTICNSF
>Mature_358_residues
MMQFIDLVAQQDRIKDKLNTNIQKVLAHGQYILGPEVHELEEKLSAYTGAKYCITCANGTDALQIAQMVFGIGPGDEVIT
PGFTYIATAETVAVLGAKPIYVDINPKTYNLDVEQLEAAITPRTKAIIGVSLYGQCADYDAINAIAAKYNIPVIEDAAQS
FGASYKGRKSCNLTTIACTSFFPSKPLGCYGDGGAIFTSDEALATVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP
KLEILDDEMQVRQRVAETYNQFFIEADITTIPFIESHNQSAWAQYTIQVDNRDEIQAKLREQGIPTAVHYPIPLNKQPAV
ADTNAVLPVGDEVAERVMSLPMHPYMQTTDIKTICNSF

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=353, Percent_Identity=33.9943342776204, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI2367285, Length=347, Percent_Identity=30.5475504322767, Blast_Score=144, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39506; Mature: 39506

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQFIDLVAQQDRIKDKLNTNIQKVLAHGQYILGPEVHELEEKLSAYTGAKYCITCANGT
CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCC
DALQIAQMVFGIGPGDEVITPGFTYIATAETVAVLGAKPIYVDINPKTYNLDVEQLEAAI
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHC
TPRTKAIIGVSLYGQCADYDAINAIAAKYNIPVIEDAAQSFGASYKGRKSCNLTTIACTS
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC
FFPSKPLGCYGDGGAIFTSDEALATVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP
CCCCCCCCEECCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHC
KLEILDDEMQVRQRVAETYNQFFIEADITTIPFIESHNQSAWAQYTIQVDNRDEIQAKLR
HHHHHCHHHHHHHHHHHHHHHEEEEECCEEECEEECCCCCCEEEEEEEECCHHHHHHHHH
EQGIPTAVHYPIPLNKQPAVADTNAVLPVGDEVAERVMSLPMHPYMQTTDIKTICNSF
HCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MMQFIDLVAQQDRIKDKLNTNIQKVLAHGQYILGPEVHELEEKLSAYTGAKYCITCANGT
CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCC
DALQIAQMVFGIGPGDEVITPGFTYIATAETVAVLGAKPIYVDINPKTYNLDVEQLEAAI
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCEEECCHHHHHHHC
TPRTKAIIGVSLYGQCADYDAINAIAAKYNIPVIEDAAQSFGASYKGRKSCNLTTIACTS
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC
FFPSKPLGCYGDGGAIFTSDEALATVMRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP
CCCCCCCCEECCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHC
KLEILDDEMQVRQRVAETYNQFFIEADITTIPFIESHNQSAWAQYTIQVDNRDEIQAKLR
HHHHHCHHHHHHHHHHHHHHHEEEEECCEEECEEECCCCCCEEEEEEEECCHHHHHHHHH
EQGIPTAVHYPIPLNKQPAVADTNAVLPVGDEVAERVMSLPMHPYMQTTDIKTICNSF
HCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]