Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is katE [H]
Identifier: 93005390
GI number: 93005390
Start: 662430
End: 664517
Strand: Direct
Name: katE [H]
Synonym: Pcryo_0560
Alternate gene names: 93005390
Gene position: 662430-664517 (Clockwise)
Preceding gene: 93005388
Following gene: 93005391
Centisome position: 21.65
GC content: 44.59
Gene sequence:
>2088_bases ATGAATAAGAATATTGATCATACCGACCCCGCTAAAGACATGAATATGGAACGTGGCAATGGTGGTGAAACCCATCAACG TGCAGGTGATGACACCAAAGTACTCACCACCCAGCAAGGTGTACCAATTTCGGACAATCAAAACTCACTCAAAGCAGGAC CACGCGGTCCAACGCTATTAGAGGATTTTGTCTTACGTGAAAAGATCCATCACTTTGACCATGAGCGTATTCCTGAGCGT ATTGTGCATGCGCGTGGTAGTGCCGCACACGGTTATTTTGAGCTGACCGAATCATTAGAAGAATATACCACGGCTAAAAT TTTGACTGAGACTGGCAAACAAACGCCACTATTTACGCGTTTTTCAACTGTTGCCGGTAGTAAAGGCTCAAAAGATACAC CGCGTGATGTACGTGGCTTTTCAGTAAAAGTTTATACCGAAGAAGGCAACTGGGATTTGGTCGGTAATGACATGCCGATT TTCTTTATCCAAGATGCAATGAAATTCCCAGACCTTGTCCATGCAGTCAAACCTGAGCCGGATCGTGGTTTTCCGCAAGC GGCGTCCGCTCATGATACGTTTTGGGACTTTGTATCATTAAGTCCTGAAACCATGCACAATGTCATTTGGTTGATGAGTG ATCGCGGGATACCGCGTAGCTTACGCATGATTGAAGGTTTTGGTATTCATAGTTATCGCCTAATTAATAAAGAAGGCAAA AGTACCTTTATGCGTTTCCACTGGAAACCAGTGCTCGGCGTACAATCAACGACATGGGATGAAGCGGTAAAAATCTCTGG TGCCGATCCTGATTATCATCGCCGCGATTTGTTTGAATCGATTAATAACGGTGATTTCCCTGAATGGGAATTTGGTGTGC AATTATTCACGGAAGAAGAAGCCAATGACTTTCCATTTGACCATTTAGATGCGACCAAGCTGATTCCAGAAGAAATGGTG CCCGTTAAAATCGTTGGTAAAATGGTGCTAAATCGTTATCCTGATAATTTCTTTGCTGAAACAGAGCAAGTGGCCTTCTG TCCATCGCATGTACCGCCGGGTATTGATTTTAGTAATGATCCCTTATTACAAGGTCGTCTGTTCAGCTACTTGGACACTC AGTTATCGCGCTTAGGCTCACCAAATTTTGCACAAATTCCAATCAATGCACCAAAATGTCCATTTGCTAATAATCAGCAA GATGGTCATATGCAGATGCAAGTGCCAAAAACGCGCGTGCTTTATGAGCCACAAAGTCTTGATCCTACCAGACCACGTGA GAGTGTGAGAAAAGGTTTTGCATCTTTTGCTGAGACGTTAGATGATGGTGTTAAAGGTCGCGTGCGCGCTGAGAGCTTCG CGGATCATTATAGTCAGCCACGTATGTTCTATCGCAGCCAAACGACAGTTGAACAAGCACATATTGCCTCAGCCTATGCT TTTGAGCTAGGTAAAGTAGATACAGCGCATGTCCGTAGTCGTACGCTTAGCCATTTACGTAATATCGATGAAGATTTGGC AAGTCGCGTGGCAAAAGCGTTGGGTATGGAGCTGCCGGAAGCTGCTGAATCTGCCGCACCTATTCAAGATATGGAAATCT CTCCAGCCCTAAGAACGATTGGTCTGTCACCTAAAAGTTTAAAGGGTCGCATGATTGGTATCTTGGTAGCGGAAGGCTCA AAGCATAGTGAAATAGAAAAATACGAGAAGGCGGCGCAAGCGCAAGGTGCCAGTGTCAAAATTATTGCACCGAATAAAGA AGTCAAATTGGACGATGATACCATCATACAAGTTGATGAGCGCGTAGCAGGGGGTCCGTCTGTGATGTTTGATGCCGTGG TTAGTATCATCATGCCTGACCAAGCTAAGAAGTTGGCTAAAGACAGTGCCACGTTAGATTGGTTCACGGATGCTTATGTA CATTGTAAAGCGATTTCTTATTGCGGGGCGACAGATGAGTTTATCTTAAGTAAGCTGCCGATTGAAAAAGATGCCTTTGT CACGCCACTATCTGATGTGGACGTCTTTATTGAAAATGCCAAATCGCGCTTATGGGAACGTGAGCCAAAGGTTCGTGACT TAGCTTAA
Upstream 100 bases:
>100_bases TGAAGTCGCCACTATCGCTACGGATATAAAAACTGTGTTAGCGCTTATTAAATGGTCTAGTTATAGTCCATTTTTACTCA TCAGCTAGCTAGGATATTTT
Downstream 100 bases:
>100_bases TTTGGCTTAATATATTCGTATTTAAATCTCCAACAATGAACTCAGCCACTGTGCTGGGTTTTTTTATGAGAATTTTTTAT TCTTCAGCCTAAATAATTTT
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MNKNIDHTDPAKDMNMERGNGGETHQRAGDDTKVLTTQQGVPISDNQNSLKAGPRGPTLLEDFVLREKIHHFDHERIPER IVHARGSAAHGYFELTESLEEYTTAKILTETGKQTPLFTRFSTVAGSKGSKDTPRDVRGFSVKVYTEEGNWDLVGNDMPI FFIQDAMKFPDLVHAVKPEPDRGFPQAASAHDTFWDFVSLSPETMHNVIWLMSDRGIPRSLRMIEGFGIHSYRLINKEGK STFMRFHWKPVLGVQSTTWDEAVKISGADPDYHRRDLFESINNGDFPEWEFGVQLFTEEEANDFPFDHLDATKLIPEEMV PVKIVGKMVLNRYPDNFFAETEQVAFCPSHVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFAQIPINAPKCPFANNQQ DGHMQMQVPKTRVLYEPQSLDPTRPRESVRKGFASFAETLDDGVKGRVRAESFADHYSQPRMFYRSQTTVEQAHIASAYA FELGKVDTAHVRSRTLSHLRNIDEDLASRVAKALGMELPEAAESAAPIQDMEISPALRTIGLSPKSLKGRMIGILVAEGS KHSEIEKYEKAAQAQGASVKIIAPNKEVKLDDDTIIQVDERVAGGPSVMFDAVVSIIMPDQAKKLAKDSATLDWFTDAYV HCKAISYCGATDEFILSKLPIEKDAFVTPLSDVDVFIENAKSRLWEREPKVRDLA
Sequences:
>Translated_695_residues MNKNIDHTDPAKDMNMERGNGGETHQRAGDDTKVLTTQQGVPISDNQNSLKAGPRGPTLLEDFVLREKIHHFDHERIPER IVHARGSAAHGYFELTESLEEYTTAKILTETGKQTPLFTRFSTVAGSKGSKDTPRDVRGFSVKVYTEEGNWDLVGNDMPI FFIQDAMKFPDLVHAVKPEPDRGFPQAASAHDTFWDFVSLSPETMHNVIWLMSDRGIPRSLRMIEGFGIHSYRLINKEGK STFMRFHWKPVLGVQSTTWDEAVKISGADPDYHRRDLFESINNGDFPEWEFGVQLFTEEEANDFPFDHLDATKLIPEEMV PVKIVGKMVLNRYPDNFFAETEQVAFCPSHVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFAQIPINAPKCPFANNQQ DGHMQMQVPKTRVLYEPQSLDPTRPRESVRKGFASFAETLDDGVKGRVRAESFADHYSQPRMFYRSQTTVEQAHIASAYA FELGKVDTAHVRSRTLSHLRNIDEDLASRVAKALGMELPEAAESAAPIQDMEISPALRTIGLSPKSLKGRMIGILVAEGS KHSEIEKYEKAAQAQGASVKIIAPNKEVKLDDDTIIQVDERVAGGPSVMFDAVVSIIMPDQAKKLAKDSATLDWFTDAYV HCKAISYCGATDEFILSKLPIEKDAFVTPLSDVDVFIENAKSRLWEREPKVRDLA >Mature_695_residues MNKNIDHTDPAKDMNMERGNGGETHQRAGDDTKVLTTQQGVPISDNQNSLKAGPRGPTLLEDFVLREKIHHFDHERIPER IVHARGSAAHGYFELTESLEEYTTAKILTETGKQTPLFTRFSTVAGSKGSKDTPRDVRGFSVKVYTEEGNWDLVGNDMPI FFIQDAMKFPDLVHAVKPEPDRGFPQAASAHDTFWDFVSLSPETMHNVIWLMSDRGIPRSLRMIEGFGIHSYRLINKEGK STFMRFHWKPVLGVQSTTWDEAVKISGADPDYHRRDLFESINNGDFPEWEFGVQLFTEEEANDFPFDHLDATKLIPEEMV PVKIVGKMVLNRYPDNFFAETEQVAFCPSHVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFAQIPINAPKCPFANNQQ DGHMQMQVPKTRVLYEPQSLDPTRPRESVRKGFASFAETLDDGVKGRVRAESFADHYSQPRMFYRSQTTVEQAHIASAYA FELGKVDTAHVRSRTLSHLRNIDEDLASRVAKALGMELPEAAESAAPIQDMEISPALRTIGLSPKSLKGRMIGILVAEGS KHSEIEKYEKAAQAQGASVKIIAPNKEVKLDDDTIIQVDERVAGGPSVMFDAVVSIIMPDQAKKLAKDSATLDWFTDAYV HCKAISYCGATDEFILSKLPIEKDAFVTPLSDVDVFIENAKSRLWEREPKVRDLA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=403, Percent_Identity=48.1389578163772, Blast_Score=395, Evalue=1e-109, Organism=Escherichia coli, GI48994891, Length=696, Percent_Identity=51.2931034482759, Blast_Score=687, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=498, Percent_Identity=42.9718875502008, Blast_Score=403, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25147792, Length=486, Percent_Identity=43.6213991769547, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI25151141, Length=472, Percent_Identity=44.4915254237288, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6320462, Length=367, Percent_Identity=45.2316076294278, Blast_Score=325, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6321525, Length=536, Percent_Identity=34.8880597014925, Blast_Score=303, Evalue=8e-83, Organism=Drosophila melanogaster, GI17981717, Length=373, Percent_Identity=46.3806970509383, Blast_Score=356, Evalue=3e-98, Organism=Drosophila melanogaster, GI19920968, Length=402, Percent_Identity=42.7860696517413, Blast_Score=342, Evalue=6e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 77943; Mature: 77943
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNIDHTDPAKDMNMERGNGGETHQRAGDDTKVLTTQQGVPISDNQNSLKAGPRGPTLL CCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH EDFVLREKIHHFDHERIPERIVHARGSAAHGYFELTESLEEYTTAKILTETGKQTPLFTR HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FSTVAGSKGSKDTPRDVRGFSVKVYTEEGNWDLVGNDMPIFFIQDAMKFPDLVHAVKPEP HHHHCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEHHHHHCHHHHHHCCCCC DRGFPQAASAHDTFWDFVSLSPETMHNVIWLMSDRGIPRSLRMIEGFGIHSYRLINKEGK CCCCCCCCCCCHHHHHHHCCCHHHHHHEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCC STFMRFHWKPVLGVQSTTWDEAVKISGADPDYHRRDLFESINNGDFPEWEFGVQLFTEEE CCEEEEECEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCC ANDFPFDHLDATKLIPEEMVPVKIVGKMVLNRYPDNFFAETEQVAFCPSHVPPGIDFSND CCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCCCCC PLLQGRLFSYLDTQLSRLGSPNFAQIPINAPKCPFANNQQDGHMQMQVPKTRVLYEPQSL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCC DPTRPRESVRKGFASFAETLDDGVKGRVRAESFADHYSQPRMFYRSQTTVEQAHIASAYA CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHH FELGKVDTAHVRSRTLSHLRNIDEDLASRVAKALGMELPEAAESAAPIQDMEISPALRTI HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHH GLSPKSLKGRMIGILVAEGSKHSEIEKYEKAAQAQGASVKIIAPNKEVKLDDDTIIQVDE CCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEECC RVAGGPSVMFDAVVSIIMPDQAKKLAKDSATLDWFTDAYVHCKAISYCGATDEFILSKLP CCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHEEEHHHHCCCCHHHHHHHCC IEKDAFVTPLSDVDVFIENAKSRLWEREPKVRDLA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNKNIDHTDPAKDMNMERGNGGETHQRAGDDTKVLTTQQGVPISDNQNSLKAGPRGPTLL CCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH EDFVLREKIHHFDHERIPERIVHARGSAAHGYFELTESLEEYTTAKILTETGKQTPLFTR HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH FSTVAGSKGSKDTPRDVRGFSVKVYTEEGNWDLVGNDMPIFFIQDAMKFPDLVHAVKPEP HHHHCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCEEEEHHHHHCHHHHHHCCCCC DRGFPQAASAHDTFWDFVSLSPETMHNVIWLMSDRGIPRSLRMIEGFGIHSYRLINKEGK CCCCCCCCCCCHHHHHHHCCCHHHHHHEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCC STFMRFHWKPVLGVQSTTWDEAVKISGADPDYHRRDLFESINNGDFPEWEFGVQLFTEEE CCEEEEECEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCC ANDFPFDHLDATKLIPEEMVPVKIVGKMVLNRYPDNFFAETEQVAFCPSHVPPGIDFSND CCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCCCCC PLLQGRLFSYLDTQLSRLGSPNFAQIPINAPKCPFANNQQDGHMQMQVPKTRVLYEPQSL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCC DPTRPRESVRKGFASFAETLDDGVKGRVRAESFADHYSQPRMFYRSQTTVEQAHIASAYA CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHH FELGKVDTAHVRSRTLSHLRNIDEDLASRVAKALGMELPEAAESAAPIQDMEISPALRTI HHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHH GLSPKSLKGRMIGILVAEGSKHSEIEKYEKAAQAQGASVKIIAPNKEVKLDDDTIIQVDE CCCCHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEECC RVAGGPSVMFDAVVSIIMPDQAKKLAKDSATLDWFTDAYVHCKAISYCGATDEFILSKLP CCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHEEEHHHHCCCCHHHHHHHCC IEKDAFVTPLSDVDVFIENAKSRLWEREPKVRDLA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]