Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005388
Identifier: 93005388
GI number: 93005388
Start: 660294
End: 660947
Strand: Direct
Name: 93005388
Synonym: Pcryo_0558
Alternate gene names: NA
Gene position: 660294-660947 (Clockwise)
Preceding gene: 93005387
Following gene: 93005390
Centisome position: 21.58
GC content: 39.91
Gene sequence:
>654_bases GTGTTTAATAATGATTCAAATAATACTCAGTCTATTGCTCCTGTTGGTATACCGTTTTCTCAAGCGTGTGAAAATAATAA GCAGCCGATTTTAGAAATTTTACAGCAAGAACTGCAATATTGTATTCATGTATTAGAAGTGGGTTCAGGGACGGGTCAGC ATAGCGTTTATTTTGCGCCAAGATTGACCCATTTAACATGGCAGACCAGTGATGTGTTAGCCCATCATGCGACTATTAAT GCTTGGCATGCTGCTTATCCTGCGCCCAATTTATATGCGCCGCTAACTTTTGATTTGGCAGTCGATCCATTACCGATTAG TCTTGCTAGCAATCAGCCCTATGATGCGGTATTTACCGCCAACACCCTGCATATTATCTCATGGTCTTTGGTGGAAAAGT TGTTTGAGTTAGTAGGTGAGGCTTTACCTATCAATGGAAAGTTAATCGTATATGGACCGTTTAATGAAAACGGACAGTAT ACCAGCGCGGGTAATCAGCAGTTTGATAGTAGTCTCAGACAACGCGACCCAAAGAGCGGTATTCGTCATTTAGAAGACAT AATAGCTTTGGCAAATACACATATGCTAAAACTATCTGATAAATATGCGATGCCTGCTAATAACCAGCTATTGGTATTCC AAAAAATTAGATAA
Upstream 100 bases:
>100_bases AGCTGGGGTAGAAGCGGGTATTTATTAGTTTTTAATGCTTTGCTTGTAGTCATTATTCCTATCAAAGCTGTGACAGTGTA GACCTATAAGGATGTGAGCC
Downstream 100 bases:
>100_bases CGAATCTTTGGCATAAAAAGACCTCTTAATCGATCGTTTTAAGATCTTGATTGAGAGGTCTTTTTTTATATCTATAATTG ATCCCAAATAAAAAAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MFNNDSNNTQSIAPVGIPFSQACENNKQPILEILQQELQYCIHVLEVGSGTGQHSVYFAPRLTHLTWQTSDVLAHHATIN AWHAAYPAPNLYAPLTFDLAVDPLPISLASNQPYDAVFTANTLHIISWSLVEKLFELVGEALPINGKLIVYGPFNENGQY TSAGNQQFDSSLRQRDPKSGIRHLEDIIALANTHMLKLSDKYAMPANNQLLVFQKIR
Sequences:
>Translated_217_residues MFNNDSNNTQSIAPVGIPFSQACENNKQPILEILQQELQYCIHVLEVGSGTGQHSVYFAPRLTHLTWQTSDVLAHHATIN AWHAAYPAPNLYAPLTFDLAVDPLPISLASNQPYDAVFTANTLHIISWSLVEKLFELVGEALPINGKLIVYGPFNENGQY TSAGNQQFDSSLRQRDPKSGIRHLEDIIALANTHMLKLSDKYAMPANNQLLVFQKIR >Mature_217_residues MFNNDSNNTQSIAPVGIPFSQACENNKQPILEILQQELQYCIHVLEVGSGTGQHSVYFAPRLTHLTWQTSDVLAHHATIN AWHAAYPAPNLYAPLTFDLAVDPLPISLASNQPYDAVFTANTLHIISWSLVEKLFELVGEALPINGKLIVYGPFNENGQY TSAGNQQFDSSLRQRDPKSGIRHLEDIIALANTHMLKLSDKYAMPANNQLLVFQKIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=200, Percent_Identity=35.5, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71998087, Length=200, Percent_Identity=33, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI28574095, Length=203, Percent_Identity=33.4975369458128, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24166; Mature: 24166
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNDSNNTQSIAPVGIPFSQACENNKQPILEILQQELQYCIHVLEVGSGTGQHSVYFAP CCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC RLTHLTWQTSDVLAHHATINAWHAAYPAPNLYAPLTFDLAVDPLPISLASNQPYDAVFTA CEEEEEECHHHHHHHHHEEEEHHHCCCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEC NTLHIISWSLVEKLFELVGEALPINGKLIVYGPFNENGQYTSAGNQQFDSSLRQRDPKSG CCCEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHH IRHLEDIIALANTHMLKLSDKYAMPANNQLLVFQKIR HHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEECC >Mature Secondary Structure MFNNDSNNTQSIAPVGIPFSQACENNKQPILEILQQELQYCIHVLEVGSGTGQHSVYFAP CCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC RLTHLTWQTSDVLAHHATINAWHAAYPAPNLYAPLTFDLAVDPLPISLASNQPYDAVFTA CEEEEEECHHHHHHHHHEEEEHHHCCCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEC NTLHIISWSLVEKLFELVGEALPINGKLIVYGPFNENGQYTSAGNQQFDSSLRQRDPKSG CCCEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHH IRHLEDIIALANTHMLKLSDKYAMPANNQLLVFQKIR HHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA