Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 93005357

GI number: 93005357

Start: 623533

End: 624282

Strand: Direct

Name: etfB [H]

Synonym: Pcryo_0527

Alternate gene names: 93005357

Gene position: 623533-624282 (Clockwise)

Preceding gene: 93005356

Following gene: 93005358

Centisome position: 20.38

GC content: 40.27

Gene sequence:

>750_bases
ATGAAAGCATTAGTAGCGGTCAAGCGTGTCATTGATTACAACGTAAAAGTTCGTGTAAAAGCTGATAATTCTGGCGTAGA
TTTATCTAACACTAAAATGTCAATCAACCCTTTTGATGAAATTGCAGTAGAAGAAGCGGTTCGTCTTAAAGAAGCGGGTG
TGATTGATGAAATCATCGTTGCCTCAATTGGTCCAAAAGAGTCACAAGAGCAGATTCGTGCCGCTTTAGCACTGGGTGCT
GATCGTGGCATCTTGGTAGTAACTGATGCAAAACCTTATCCTCTACAAATCGCTAAAATCTTGAAAAATATCGCTGAATC
TGAAGCTACCGATATTATTCTACTAGGTAAGCAAGCGATTGATGATGATAATAACCAAACGGGTCAAATGCTAGCGGCAT
TGATGGGTATCGGTCAGGGTACATTTGCATCAGAAGTAAAGGTTGAAGGCGATAAAGTTAATGTAACGCGTGAAATCGAT
GGTGGTTTGCAAACGGTTGCGCTTGATTTGCCAGCGGTTATTACCACTGATTTACGTTTGAATGAGCCACGTTATGCAAA
ATTGCCTAACATCATGAAAGCGAAGAAAAAGCAGCTTGATGAAAAAACACCTGCTGATTTTGGTGTTGATATGGCATCTA
AGCAAGAAATCATTAAAGTTGTACCACCTGCTGAGCGTAAAGCTGGTATCAAAGTGGGTTCAGTTGATGAGTTGGTCGAT
AAGCTAAGAAACGAAGCAAAAGTCATTTAA

Upstream 100 bases:

>100_bases
AATCAACCTTGAGTACTATTTCGAACGACGATTTTAAAGAAATGAACCTTTGGTTCTTAACTGGCAATTTTAATTCATAA
CATTAATAAACGAGGAACGT

Downstream 100 bases:

>100_bases
TACTTTGCTAGTGCCTATCTACTGCAAAGCCATGACGTCCTAAATAAGTTTTATTGAACTTGGACATAATAGGGCTTTGT
GTACCAACAACCTCATGAAT

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKALVAVKRVIDYNVKVRVKADNSGVDLSNTKMSINPFDEIAVEEAVRLKEAGVIDEIIVASIGPKESQEQIRAALALGA
DRGILVVTDAKPYPLQIAKILKNIAESEATDIILLGKQAIDDDNNQTGQMLAALMGIGQGTFASEVKVEGDKVNVTREID
GGLQTVALDLPAVITTDLRLNEPRYAKLPNIMKAKKKQLDEKTPADFGVDMASKQEIIKVVPPAERKAGIKVGSVDELVD
KLRNEAKVI

Sequences:

>Translated_249_residues
MKALVAVKRVIDYNVKVRVKADNSGVDLSNTKMSINPFDEIAVEEAVRLKEAGVIDEIIVASIGPKESQEQIRAALALGA
DRGILVVTDAKPYPLQIAKILKNIAESEATDIILLGKQAIDDDNNQTGQMLAALMGIGQGTFASEVKVEGDKVNVTREID
GGLQTVALDLPAVITTDLRLNEPRYAKLPNIMKAKKKQLDEKTPADFGVDMASKQEIIKVVPPAERKAGIKVGSVDELVD
KLRNEAKVI
>Mature_249_residues
MKALVAVKRVIDYNVKVRVKADNSGVDLSNTKMSINPFDEIAVEEAVRLKEAGVIDEIIVASIGPKESQEQIRAALALGA
DRGILVVTDAKPYPLQIAKILKNIAESEATDIILLGKQAIDDDNNQTGQMLAALMGIGQGTFASEVKVEGDKVNVTREID
GGLQTVALDLPAVITTDLRLNEPRYAKLPNIMKAKKKQLDEKTPADFGVDMASKQEIIKVVPPAERKAGIKVGSVDELVD
KLRNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=254, Percent_Identity=57.4803149606299, Blast_Score=284, Evalue=5e-77,
Organism=Homo sapiens, GI62420877, Length=239, Percent_Identity=56.0669456066946, Blast_Score=261, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=50.197628458498, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=45.2, Blast_Score=197, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=54.4715447154472, Blast_Score=241, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=54.4715447154472, Blast_Score=241, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26891; Mature: 26891

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVAVKRVIDYNVKVRVKADNSGVDLSNTKMSINPFDEIAVEEAVRLKEAGVIDEIIV
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHH
ASIGPKESQEQIRAALALGADRGILVVTDAKPYPLQIAKILKNIAESEATDIILLGKQAI
HCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHC
DDDNNQTGQMLAALMGIGQGTFASEVKVEGDKVNVTREIDGGLQTVALDLPAVITTDLRL
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCEEEEECEEE
NEPRYAKLPNIMKAKKKQLDEKTPADFGVDMASKQEIIKVVPPAERKAGIKVGSVDELVD
CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCHHHCCCEECCHHHHHH
KLRNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKALVAVKRVIDYNVKVRVKADNSGVDLSNTKMSINPFDEIAVEEAVRLKEAGVIDEIIV
CHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHH
ASIGPKESQEQIRAALALGADRGILVVTDAKPYPLQIAKILKNIAESEATDIILLGKQAI
HCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHC
DDDNNQTGQMLAALMGIGQGTFASEVKVEGDKVNVTREIDGGLQTVALDLPAVITTDLRL
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCEEEEECEEE
NEPRYAKLPNIMKAKKKQLDEKTPADFGVDMASKQEIIKVVPPAERKAGIKVGSVDELVD
CCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCHHHCCCEECCHHHHHH
KLRNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]