| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is glnD [H]
Identifier: 93005271
GI number: 93005271
Start: 539862
End: 542603
Strand: Reverse
Name: glnD [H]
Synonym: Pcryo_0441
Alternate gene names: 93005271
Gene position: 542603-539862 (Counterclockwise)
Preceding gene: 93005272
Following gene: 93005269
Centisome position: 17.73
GC content: 44.71
Gene sequence:
>2742_bases ATGTTTAACTGTGATGTCACCGCTATTGATTTGACACCGATGCCTTTGTTTTCAGCAGACAATATGACAACTGCCTTTTT ATCAACAGACACGAGCGTGGTAGAAAAATCGCTATTTGGTATTCCTGAATGGTTGCTTCAAATAAATGACGATATCAGCC GCGCACTCGAACGTGGCGTCAATATCCGGCAACTGGTTAGCGCGCGTGCTTGCGTGATTGATGATTTATTGATCGAATTA TTTAAATGCTTTGGGCTTGATAAGACGGATTTGGCACTGTTTGCAACTGGTGGCTATGGTCGCGGTGAGTTATCGCTACA TTCAGATATCGATATTTTGCTACTAATGCCACATGATATTAACGCTGATACCAGTAGTAAAATTGATAACTTGGTGGCAC TCTTATGGGACATTGGACTTGAGCCTGCGTTATCAGTACGCAGCGTCAGTGACTGCTTGGAGGCGGCGCTTGACCATACT ATTGCCAGTGCATTATTAGAGGCTCGCCTATTAATAGGCAATGACGCCTTGCAAAATGTCCCGCACCAAATAGTAAACAA TCAATGGTCCCCGCGCTCGTTTTACGACGTAAAAATCGATGAGGCAAAAGCGCGTTATTTACAGCACAATGCCACAGAAT ATAATCTTGAGCCCAATATAAAAACCGCCCCTGGTGGTCTGCGCGATATCCATATTATCGGCTGGGTGACCAAACGCTAT TTTCGGGTCAGTAAGCTCTATGATCTGGTACAACAGAACTTTTTGACTGAAAAGGAATTCGATGAATTAAGCTTTTCAGA AAACTATTTATGGCAGATACGGCACTACCTGCACGAACTGACTGGTCGCAATGAAAACAAGCTGTTATTCGATTATCAGC GTGAGATTGCTCAACTGATGGGCTATGATACCCAGACAGATGATCAACCAAATGCTGCGGTAGAGCGCTTTATGCGCGAT TATTACCGCTGTGCGATGCAAATATCAACATTGTCTGAAATGCTAACCAATCACTACTACGAAACCATCATCGAGGCGCA GTTGCCTGATGAAGAACGCCCAAAAAAACAGCCTATCAATGCCCGCTTTAACCAAGTCGGCGACCAAATCGCAATGGCTC ATCACAGAGTATTTGCGCAGCATCCCGAGTCGATTTTAGAGATGTTTTTACTTATGGGTCAGTATGGCATCAAGAATGTC CGTACCCATACTCTACGCGCGCTAAAAATTGCAGCGCGTGGTATTGATCAGGCTTATCGCGACAATCCTACGCATCAAAC CTTGTTTTTAGCCAATCTAAAAGAGCAAAATTATCTCTTTCATCGTCTGCGTACCATGAATCGCTATGGCGTGCTTGGCA ACTATATCCCTGCCTTTGCTCAAGTTACTGGTTTGATGCAGTATGACTTGTTCCATCGTTATACGGTTGATGCCCATACC TTATTTTTGATTCGTATTCTGCACCGTTTTACGGATCCGCATTTTTATGAAGATTTTCCGCTCGTGAGCTCCATCTTTCA GCGCATCGAGCGCAAAGAGATTTTGGTATTAGCGGCGATGTTTCATGATATTGCCAAAGGTCGTGGCGGCAACCATAGTC AACTTGGCGAAATCGAGTCGATTGAATTTTGTCTGGCTCATGGTATGAGTACTGCCGACGCCAATCTGGTTGGCTGGTTG ACCCGTTATCATCTGCTGATGTCAATGACAGCTCAGAAAAAAGATATCTCAGACCCAGAGGTTGTGACACTATTTGCAGA TTTGGTGGGTAACGTTACCCATCTAAATCATCTGTATGTCTTAACCGTCGCTGATATGAACGCCACCAACCCACAACTTT GGAACAGCTGGCGTGCGACACTTATGAAGCAGCTATATTCGCAAACACGCCGTATTTTGCGGGCGGATATTGATGCCCCA ACCAATCGTCAAGATATGATTAGTGCCACACGCAAGCAAGCACTAGTGATGCTAGATAACGTCGACAATCAGCATATGAA TCGCGATGAGGTGCTGAGATTGTGGGATGATTTGGGCGATGAGTATTTTTTGCGTGAAATTGCAGAAGATATCTTATGGC ATACTGAAGCGATTTTAAATCATCCGCCTATAGGTCGAGCGTCAAATGCAGATAGTCCGCCATTAGTCGTTCTACGTGAG CATCGAGAGCTGGCGCTTGATGCAGTACAGGTTTTTGTTTATACCCAAGATCAGGTCAATTTGTTTGCGGTGACTATGGC CGTATTCGATCAGATGAATCTTGATGTATTGGATGCCCGTATTATCACAGCGACCCGTGATTTTGCGTTGGATTCTTATG TACTACTCGACCGTAGCGGTACTTTACTGGTCGATAGCGATAGCCAGCAAGAGCTTAAGCAGCGACTGATTGATGCCTTT AAAAATCCGACCGCGCCCAAACTGACGCACAAACGGATTCCACGCCAGCTCAAACATTTCGATGTAGCAACGACGATCAA TTTTGATTTCAATGATGCCTCAAATCAGCACATCATGAGCTTAGAGACCCTTGATCAGCCAGGTTTACTTGCCCGTGTTG GACAAGTATTTTTGCAGCAGCAAATTGAGGTACATGCCGCGCGTATTACTACGCTTGGCGAGCGTGCAGAAGACATGTTT TATATCAGCGATCAAAATGATCAAGCACTGAGCGCTGATAAACTTAAGACGTTAAAAACGGCACTGATAGACAGTCTTAG TGTCCGTAATGATAGAGTCTAG
Upstream 100 bases:
>100_bases TTTTTTATCTTTATACTTTCTCTATCTTATTGATCGCTTTTTATTTTTAGCGACCCTTATTTACTGAACTAGACTTCAAA CTTTTAACTGGATAAATCTC
Downstream 100 bases:
>100_bases CTTATTTTCTATATCAAACTTTTATAGATGATGCCACGTGCATATTCCTTCAGCGCATCATCGGCAAGCTCTAGAGGCAG TATATCGGCTTCCACCTTTT
Product: UTP-GlnB (protein PII) uridylyltransferase, GlnD
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MFNCDVTAIDLTPMPLFSADNMTTAFLSTDTSVVEKSLFGIPEWLLQINDDISRALERGVNIRQLVSARACVIDDLLIEL FKCFGLDKTDLALFATGGYGRGELSLHSDIDILLLMPHDINADTSSKIDNLVALLWDIGLEPALSVRSVSDCLEAALDHT IASALLEARLLIGNDALQNVPHQIVNNQWSPRSFYDVKIDEAKARYLQHNATEYNLEPNIKTAPGGLRDIHIIGWVTKRY FRVSKLYDLVQQNFLTEKEFDELSFSENYLWQIRHYLHELTGRNENKLLFDYQREIAQLMGYDTQTDDQPNAAVERFMRD YYRCAMQISTLSEMLTNHYYETIIEAQLPDEERPKKQPINARFNQVGDQIAMAHHRVFAQHPESILEMFLLMGQYGIKNV RTHTLRALKIAARGIDQAYRDNPTHQTLFLANLKEQNYLFHRLRTMNRYGVLGNYIPAFAQVTGLMQYDLFHRYTVDAHT LFLIRILHRFTDPHFYEDFPLVSSIFQRIERKEILVLAAMFHDIAKGRGGNHSQLGEIESIEFCLAHGMSTADANLVGWL TRYHLLMSMTAQKKDISDPEVVTLFADLVGNVTHLNHLYVLTVADMNATNPQLWNSWRATLMKQLYSQTRRILRADIDAP TNRQDMISATRKQALVMLDNVDNQHMNRDEVLRLWDDLGDEYFLREIAEDILWHTEAILNHPPIGRASNADSPPLVVLRE HRELALDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARIITATRDFALDSYVLLDRSGTLLVDSDSQQELKQRLIDAF KNPTAPKLTHKRIPRQLKHFDVATTINFDFNDASNQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDMF YISDQNDQALSADKLKTLKTALIDSLSVRNDRV
Sequences:
>Translated_913_residues MFNCDVTAIDLTPMPLFSADNMTTAFLSTDTSVVEKSLFGIPEWLLQINDDISRALERGVNIRQLVSARACVIDDLLIEL FKCFGLDKTDLALFATGGYGRGELSLHSDIDILLLMPHDINADTSSKIDNLVALLWDIGLEPALSVRSVSDCLEAALDHT IASALLEARLLIGNDALQNVPHQIVNNQWSPRSFYDVKIDEAKARYLQHNATEYNLEPNIKTAPGGLRDIHIIGWVTKRY FRVSKLYDLVQQNFLTEKEFDELSFSENYLWQIRHYLHELTGRNENKLLFDYQREIAQLMGYDTQTDDQPNAAVERFMRD YYRCAMQISTLSEMLTNHYYETIIEAQLPDEERPKKQPINARFNQVGDQIAMAHHRVFAQHPESILEMFLLMGQYGIKNV RTHTLRALKIAARGIDQAYRDNPTHQTLFLANLKEQNYLFHRLRTMNRYGVLGNYIPAFAQVTGLMQYDLFHRYTVDAHT LFLIRILHRFTDPHFYEDFPLVSSIFQRIERKEILVLAAMFHDIAKGRGGNHSQLGEIESIEFCLAHGMSTADANLVGWL TRYHLLMSMTAQKKDISDPEVVTLFADLVGNVTHLNHLYVLTVADMNATNPQLWNSWRATLMKQLYSQTRRILRADIDAP TNRQDMISATRKQALVMLDNVDNQHMNRDEVLRLWDDLGDEYFLREIAEDILWHTEAILNHPPIGRASNADSPPLVVLRE HRELALDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARIITATRDFALDSYVLLDRSGTLLVDSDSQQELKQRLIDAF KNPTAPKLTHKRIPRQLKHFDVATTINFDFNDASNQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDMF YISDQNDQALSADKLKTLKTALIDSLSVRNDRV >Mature_913_residues MFNCDVTAIDLTPMPLFSADNMTTAFLSTDTSVVEKSLFGIPEWLLQINDDISRALERGVNIRQLVSARACVIDDLLIEL FKCFGLDKTDLALFATGGYGRGELSLHSDIDILLLMPHDINADTSSKIDNLVALLWDIGLEPALSVRSVSDCLEAALDHT IASALLEARLLIGNDALQNVPHQIVNNQWSPRSFYDVKIDEAKARYLQHNATEYNLEPNIKTAPGGLRDIHIIGWVTKRY FRVSKLYDLVQQNFLTEKEFDELSFSENYLWQIRHYLHELTGRNENKLLFDYQREIAQLMGYDTQTDDQPNAAVERFMRD YYRCAMQISTLSEMLTNHYYETIIEAQLPDEERPKKQPINARFNQVGDQIAMAHHRVFAQHPESILEMFLLMGQYGIKNV RTHTLRALKIAARGIDQAYRDNPTHQTLFLANLKEQNYLFHRLRTMNRYGVLGNYIPAFAQVTGLMQYDLFHRYTVDAHT LFLIRILHRFTDPHFYEDFPLVSSIFQRIERKEILVLAAMFHDIAKGRGGNHSQLGEIESIEFCLAHGMSTADANLVGWL TRYHLLMSMTAQKKDISDPEVVTLFADLVGNVTHLNHLYVLTVADMNATNPQLWNSWRATLMKQLYSQTRRILRADIDAP TNRQDMISATRKQALVMLDNVDNQHMNRDEVLRLWDDLGDEYFLREIAEDILWHTEAILNHPPIGRASNADSPPLVVLRE HRELALDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARIITATRDFALDSYVLLDRSGTLLVDSDSQQELKQRLIDAF KNPTAPKLTHKRIPRQLKHFDVATTINFDFNDASNQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDMF YISDQNDQALSADKLKTLKTALIDSLSVRNDRV
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=864, Percent_Identity=37.6157407407407, Blast_Score=558, Evalue=1e-160,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 104640; Mature: 104640
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNCDVTAIDLTPMPLFSADNMTTAFLSTDTSVVEKSLFGIPEWLLQINDDISRALERGV CCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHCHHHHHHHHCCC NIRQLVSARACVIDDLLIELFKCFGLDKTDLALFATGGYGRGELSLHSDIDILLLMPHDI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCEEEECCCCC NADTSSKIDNLVALLWDIGLEPALSVRSVSDCLEAALDHTIASALLEARLLIGNDALQNV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC PHQIVNNQWSPRSFYDVKIDEAKARYLQHNATEYNLEPNIKTAPGGLRDIHIIGWVTKRY CHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHH FRVSKLYDLVQQNFLTEKEFDELSFSENYLWQIRHYLHELTGRNENKLLFDYQREIAQLM HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH GYDTQTDDQPNAAVERFMRDYYRCAMQISTLSEMLTNHYYETIIEAQLPDEERPKKQPIN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARFNQVGDQIAMAHHRVFAQHPESILEMFLLMGQYGIKNVRTHTLRALKIAARGIDQAYR CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC DNPTHQTLFLANLKEQNYLFHRLRTMNRYGVLGNYIPAFAQVTGLMQYDLFHRYTVDAHT CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHH LFLIRILHRFTDPHFYEDFPLVSSIFQRIERKEILVLAAMFHDIAKGRGGNHSQLGEIES HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IEFCLAHGMSTADANLVGWLTRYHLLMSMTAQKKDISDPEVVTLFADLVGNVTHLNHLYV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEE LTVADMNATNPQLWNSWRATLMKQLYSQTRRILRADIDAPTNRQDMISATRKQALVMLDN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEC VDNQHMNRDEVLRLWDDLGDEYFLREIAEDILWHTEAILNHPPIGRASNADSPPLVVLRE CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH HRELALDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARIITATRDFALDSYVLLDRSG HHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHEEEEEHHHHCCCCEEEEECCC TLLVDSDSQQELKQRLIDAFKNPTAPKLTHKRIPRQLKHFDVATTINFDFNDASNQHIMS EEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEE LETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDMFYISDQNDQALSADKLKTLKT ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH ALIDSLSVRNDRV HHHHHHCCCCCCC >Mature Secondary Structure MFNCDVTAIDLTPMPLFSADNMTTAFLSTDTSVVEKSLFGIPEWLLQINDDISRALERGV CCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHCHHHHHHHHCCC NIRQLVSARACVIDDLLIELFKCFGLDKTDLALFATGGYGRGELSLHSDIDILLLMPHDI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCEEEECCCCC NADTSSKIDNLVALLWDIGLEPALSVRSVSDCLEAALDHTIASALLEARLLIGNDALQNV CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC PHQIVNNQWSPRSFYDVKIDEAKARYLQHNATEYNLEPNIKTAPGGLRDIHIIGWVTKRY CHHHHCCCCCCCCEEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHH FRVSKLYDLVQQNFLTEKEFDELSFSENYLWQIRHYLHELTGRNENKLLFDYQREIAQLM HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH GYDTQTDDQPNAAVERFMRDYYRCAMQISTLSEMLTNHYYETIIEAQLPDEERPKKQPIN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARFNQVGDQIAMAHHRVFAQHPESILEMFLLMGQYGIKNVRTHTLRALKIAARGIDQAYR CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC DNPTHQTLFLANLKEQNYLFHRLRTMNRYGVLGNYIPAFAQVTGLMQYDLFHRYTVDAHT CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHH LFLIRILHRFTDPHFYEDFPLVSSIFQRIERKEILVLAAMFHDIAKGRGGNHSQLGEIES HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH IEFCLAHGMSTADANLVGWLTRYHLLMSMTAQKKDISDPEVVTLFADLVGNVTHLNHLYV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCEEEE LTVADMNATNPQLWNSWRATLMKQLYSQTRRILRADIDAPTNRQDMISATRKQALVMLDN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEC VDNQHMNRDEVLRLWDDLGDEYFLREIAEDILWHTEAILNHPPIGRASNADSPPLVVLRE CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHH HRELALDAVQVFVYTQDQVNLFAVTMAVFDQMNLDVLDARIITATRDFALDSYVLLDRSG HHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHEEEEEHHHHCCCCEEEEECCC TLLVDSDSQQELKQRLIDAFKNPTAPKLTHKRIPRQLKHFDVATTINFDFNDASNQHIMS EEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEE LETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDMFYISDQNDQALSADKLKTLKT ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH ALIDSLSVRNDRV HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA