Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005268
Identifier: 93005268
GI number: 93005268
Start: 535384
End: 537327
Strand: Reverse
Name: 93005268
Synonym: Pcryo_0438
Alternate gene names: NA
Gene position: 537327-535384 (Counterclockwise)
Preceding gene: 93005269
Following gene: 93005267
Centisome position: 17.56
GC content: 44.19
Gene sequence:
>1944_bases ATGCCCCATCTTGATTTTACCCAACCACCATTTGATGTATTAAATGCCGCTGAACGCCAAAGTATCAAAAAAAATACCCA AGTGCGTTATCTTGCCAAAGATGAGATGTTACCAGCGGATGATTTGCAGTACTTCTATGTGGTGCTTAAAGGTCATGTCG AGCAGTTGTTAGATGGTGATTTTGTCGCCTCTTATTTGGGCAACAACCATACTGCCCATCTTAATAGTAATGATTGGTTT GATAGCAGGCGCTCACCAGAGTCGCTCATAGAAGATGGGCTGCAAGAAGATAAAAACATTGATTCGCAGCCGGCTGCTTA TCAGTTTCGCGCTGTCGAAGATACTTTATTGCTGCAAGTAAATGGGGTAATCATTGATAAAATCGGTGCCCAAAACCATT TCGTACGCCAATTATTGTCAGAAAATCTGCCAGAGCGTTTAAAAGCTTTACAGCTGAGGCATGGTGGAAAAAAACTTGAC GCTACCAGCTATGACGACCCTCAGGAAGTACAGCAAATCATGCTACAGCCGGTGATTGATATTACTTTACTACCAGTCCA TATCGTTGACGCAGACGATAGTCTATATCAAGCAGCACGTACCATGACTGAGGCTGGATTGAAGCATGTTTTGATACGCC CACCAGGACATTTACAAGATAAAAATAGCTCCGATCGTACCTTGGGTATCCTCAGCGATAATGATATCTGCCGCGCCGTC AGCGACCAACAAAACACTGTTACAACGCCTTGTCAAAACTATGCAAGTTTTAATCTGCGAACCATTAACGCTGATAATGA GATTGGTGATGCGTTACTAACCATGACTCGCTATCGCATTCACAGGTTACCAGTGATAGATACCAATGGTAAAGTCATCG GTGTGCTTGCACAAGGCGATATGCTTGCTCATATTGGTCATCATTCTCAGCTGATTAGTATTCAAATTAACCAAGCCACA GATTTGCCAAGTTTGGCGACCGCAGTTGAACTCATTGGGCGATATATACGTGCTCAGCATCAAAACGGTATCAAAATGGG CAACGTCAGCCGCATGGTACAAACCCTTAACGCGCAAGTATTTACCAAACTTTGGCAACTTATCGTTCCTGATGAAGTAA TGGAGAATACCTGTGTTATCGTCATGGGCTCAGAGGGTCGCGGCGAGCAAATCATGCGTACCGATCAAGACAATGCGCTC ATCATGCGTGATGGTTATGACCACCCTAAGCTGGCACAATTTGCCGATACCTTTAACCAGCACTTAGCAGAACTTGGCTA TCCGCTATGCGACGGCAACATTATGATGAATAATCCCATGTGGCGGCAACCATTAAAAGCGTTTAAAGCGCAGATTAGTC TATGGTTTAAAAACACTGACCCGATGCACAGTATTTATTTATCCGCTATATTTGATGGTGAATATGTCTGCGGTGATGAA ACGCTATTGACGCAGGTTCGTGAACATCTGAAGACGGCCCATAGGCAGTCAGACTTGATGTTCGTGCGCCAATTTGCACG AGCAGCGCTACAGTTCGGCGATGTCAATCAATGGTGGCAAAAGCTAGTACCGTTATTAGGTGGTAAACCAAGCGCTTATA CTATTGACCTCAAAAAAGCGGGTATCTTTCCATTGGTACATGGTATCCGTACCTTGGCGTTAGAAAACGATCTCTTTACT GATGCTAGCAGCAAAGGTCGTCTGAAAGCTTTGGTTCAAGCTCGGGCCTTAACCCAAGAGCGTGCCGATACCTTACTTGA GGCATTAGAGTTCTTTATGGCGCAGCGCCTATCGGTTGCTTTATTGACAGACAATAAGCATGCAAAAGAAGTCGATCCAA CGACCTTGTCTGCCCTTGAGCGTGATTTATTAAAAGAGTGTTTGGCGGTAGTAAAAAGCTTTAAAGACCAGTTAAGCCGA CATTATCAGCTTGAATTTGGTTAA
Upstream 100 bases:
>100_bases ATGAATATCAGCAGTACTTGATGTATCGATATTACTTTTCCCTGACTGTATTTATCATACTTACATCCCTCTTATTGCTT ATGCCATCAAGGATGATGCC
Downstream 100 bases:
>100_bases GGTAAACCGGTTAGCCTTGGAGATAGATGACGATGAACTGGCTAAAACAGCTGTCTACTGCTTGGCAAAAAAACCAATTA CAGCGACCTGAACTGGCATC
Product: signal-transduction protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 647; Mature: 646
Protein sequence:
>647_residues MPHLDFTQPPFDVLNAAERQSIKKNTQVRYLAKDEMLPADDLQYFYVVLKGHVEQLLDGDFVASYLGNNHTAHLNSNDWF DSRRSPESLIEDGLQEDKNIDSQPAAYQFRAVEDTLLLQVNGVIIDKIGAQNHFVRQLLSENLPERLKALQLRHGGKKLD ATSYDDPQEVQQIMLQPVIDITLLPVHIVDADDSLYQAARTMTEAGLKHVLIRPPGHLQDKNSSDRTLGILSDNDICRAV SDQQNTVTTPCQNYASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGDMLAHIGHHSQLISIQINQAT DLPSLATAVELIGRYIRAQHQNGIKMGNVSRMVQTLNAQVFTKLWQLIVPDEVMENTCVIVMGSEGRGEQIMRTDQDNAL IMRDGYDHPKLAQFADTFNQHLAELGYPLCDGNIMMNNPMWRQPLKAFKAQISLWFKNTDPMHSIYLSAIFDGEYVCGDE TLLTQVREHLKTAHRQSDLMFVRQFARAALQFGDVNQWWQKLVPLLGGKPSAYTIDLKKAGIFPLVHGIRTLALENDLFT DASSKGRLKALVQARALTQERADTLLEALEFFMAQRLSVALLTDNKHAKEVDPTTLSALERDLLKECLAVVKSFKDQLSR HYQLEFG
Sequences:
>Translated_647_residues MPHLDFTQPPFDVLNAAERQSIKKNTQVRYLAKDEMLPADDLQYFYVVLKGHVEQLLDGDFVASYLGNNHTAHLNSNDWF DSRRSPESLIEDGLQEDKNIDSQPAAYQFRAVEDTLLLQVNGVIIDKIGAQNHFVRQLLSENLPERLKALQLRHGGKKLD ATSYDDPQEVQQIMLQPVIDITLLPVHIVDADDSLYQAARTMTEAGLKHVLIRPPGHLQDKNSSDRTLGILSDNDICRAV SDQQNTVTTPCQNYASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGDMLAHIGHHSQLISIQINQAT DLPSLATAVELIGRYIRAQHQNGIKMGNVSRMVQTLNAQVFTKLWQLIVPDEVMENTCVIVMGSEGRGEQIMRTDQDNAL IMRDGYDHPKLAQFADTFNQHLAELGYPLCDGNIMMNNPMWRQPLKAFKAQISLWFKNTDPMHSIYLSAIFDGEYVCGDE TLLTQVREHLKTAHRQSDLMFVRQFARAALQFGDVNQWWQKLVPLLGGKPSAYTIDLKKAGIFPLVHGIRTLALENDLFT DASSKGRLKALVQARALTQERADTLLEALEFFMAQRLSVALLTDNKHAKEVDPTTLSALERDLLKECLAVVKSFKDQLSR HYQLEFG >Mature_646_residues PHLDFTQPPFDVLNAAERQSIKKNTQVRYLAKDEMLPADDLQYFYVVLKGHVEQLLDGDFVASYLGNNHTAHLNSNDWFD SRRSPESLIEDGLQEDKNIDSQPAAYQFRAVEDTLLLQVNGVIIDKIGAQNHFVRQLLSENLPERLKALQLRHGGKKLDA TSYDDPQEVQQIMLQPVIDITLLPVHIVDADDSLYQAARTMTEAGLKHVLIRPPGHLQDKNSSDRTLGILSDNDICRAVS DQQNTVTTPCQNYASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGDMLAHIGHHSQLISIQINQATD LPSLATAVELIGRYIRAQHQNGIKMGNVSRMVQTLNAQVFTKLWQLIVPDEVMENTCVIVMGSEGRGEQIMRTDQDNALI MRDGYDHPKLAQFADTFNQHLAELGYPLCDGNIMMNNPMWRQPLKAFKAQISLWFKNTDPMHSIYLSAIFDGEYVCGDET LLTQVREHLKTAHRQSDLMFVRQFARAALQFGDVNQWWQKLVPLLGGKPSAYTIDLKKAGIFPLVHGIRTLALENDLFTD ASSKGRLKALVQARALTQERADTLLEALEFFMAQRLSVALLTDNKHAKEVDPTTLSALERDLLKECLAVVKSFKDQLSRH YQLEFG
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72980; Mature: 72849
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLDFTQPPFDVLNAAERQSIKKNTQVRYLAKDEMLPADDLQYFYVVLKGHVEQLLDGD CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHH FVASYLGNNHTAHLNSNDWFDSRRSPESLIEDGLQEDKNIDSQPAAYQFRAVEDTLLLQV HHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEE NGVIIDKIGAQNHFVRQLLSENLPERLKALQLRHGGKKLDATSYDDPQEVQQIMLQPVID CCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC ITLLPVHIVDADDSLYQAARTMTEAGLKHVLIRPPGHLQDKNSSDRTLGILSDNDICRAV EEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHH SDQQNTVTTPCQNYASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGD CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC MLAHIGHHSQLISIQINQATDLPSLATAVELIGRYIRAQHQNGIKMGNVSRMVQTLNAQV EEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FTKLWQLIVPDEVMENTCVIVMGSEGRGEQIMRTDQDNALIMRDGYDHPKLAQFADTFNQ HHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH HLAELGYPLCDGNIMMNNPMWRQPLKAFKAQISLWFKNTDPMHSIYLSAIFDGEYVCGDE HHHHCCCCEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCHHHHEEHEEECCCEEECCH TLLTQVREHLKTAHRQSDLMFVRQFARAALQFGDVNQWWQKLVPLLGGKPSAYTIDLKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCC GIFPLVHGIRTLALENDLFTDASSKGRLKALVQARALTQERADTLLEALEFFMAQRLSVA CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE LLTDNKHAKEVDPTTLSALERDLLKECLAVVKSFKDQLSRHYQLEFG EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC >Mature Secondary Structure PHLDFTQPPFDVLNAAERQSIKKNTQVRYLAKDEMLPADDLQYFYVVLKGHVEQLLDGD CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHH FVASYLGNNHTAHLNSNDWFDSRRSPESLIEDGLQEDKNIDSQPAAYQFRAVEDTLLLQV HHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEE NGVIIDKIGAQNHFVRQLLSENLPERLKALQLRHGGKKLDATSYDDPQEVQQIMLQPVID CCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC ITLLPVHIVDADDSLYQAARTMTEAGLKHVLIRPPGHLQDKNSSDRTLGILSDNDICRAV EEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHH SDQQNTVTTPCQNYASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGD CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC MLAHIGHHSQLISIQINQATDLPSLATAVELIGRYIRAQHQNGIKMGNVSRMVQTLNAQV EEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FTKLWQLIVPDEVMENTCVIVMGSEGRGEQIMRTDQDNALIMRDGYDHPKLAQFADTFNQ HHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH HLAELGYPLCDGNIMMNNPMWRQPLKAFKAQISLWFKNTDPMHSIYLSAIFDGEYVCGDE HHHHCCCCEECCCEEECCCHHHHHHHHHHHHEEEEECCCCCHHHHEEHEEECCCEEECCH TLLTQVREHLKTAHRQSDLMFVRQFARAALQFGDVNQWWQKLVPLLGGKPSAYTIDLKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCC GIFPLVHGIRTLALENDLFTDASSKGRLKALVQARALTQERADTLLEALEFFMAQRLSVA CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE LLTDNKHAKEVDPTTLSALERDLLKECLAVVKSFKDQLSRHYQLEFG EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA