Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005183
Identifier: 93005183
GI number: 93005183
Start: 429760
End: 431376
Strand: Direct
Name: 93005183
Synonym: Pcryo_0352
Alternate gene names: NA
Gene position: 429760-431376 (Clockwise)
Preceding gene: 93005182
Following gene: 93005188
Centisome position: 14.05
GC content: 32.9
Gene sequence:
>1617_bases ATGAGTGTCGACAATATGGAAAATTTAGACGAAGAAACTCGTAAAAAAATTGAAAAGTTACTTAAGGTGACGCGTGAGAA AGATGGTAATGAGAGTTATGCCAGTGCACAAATTGATAAGGGTTTGATTTATTACAATCTTAATCAGCGTAAACAATCTT ATGAATCTTTCAATAATATTAATAAGTCTGATAGCTTGACTCGTTATATGATGGCACAATTTGGTATGGGGGGTATGTTA GCTGGAGACAGTAAGTTTAATGAGGCGTTAAAAGTTTGGAGTAATATAAAAGGGTTAGGAGACTCTTTAGAGACTGCTGG TTTAAAGTTTAGAGTAGGTGTTGCTCTTTTAGAAGATAGTTTTTCTGAGTATGATGAAGCGAAGCAGTATTTTATCGAAG CGATAGAATATTATCCATATGAGTCATATTGTTACCAAAAAATATGTAATTTACTTTCAGATTCACGATTGAAGGTAGCT GGTAAAAAATCTTTGCAGCTATTAAATAAGACGTTGGAAATTGTGGAGATATTAAAGTTAGATTTTGAACCAGATTCTAG TGACAATAAATCCCCTGAGAGAAAACTTGCTCATTATACAAACACTAGTATTACTAACCTTTTATTAGAAAAGAATGAAG ATGGTAGCCTACCAAGTTTTTTTCGTCTTAATACTATTAATAATGTTAATGATCCAAGCGAGGGACATTTATTAGTAAAC TATTTGAAAGGTATAAGAGAAAATTCTTTCTATGCACCAGATTTTGATAAAGATTTACATGCATTCATTAGCTGCTTTAC ATTCAATCATGATAGCCTTAATCAATTTCGACTATATGGAAAAGAAGCTGATAAAGAAGCTTCAGGTGTCAGTCTTGTAT TTAAAAAGGAGTTTTTTCAGCTAGATAATTCTTTAGGAGGGCTATCTTTCCTATCCTTTGAAAGTAACATCCAGAGTGCA AATAGAGATATTTCTACTTTAGTAATTAATAAACATTCAAGTATGAAGGAAAGCTTGAGTAGTAAAACTAGAGTTAGCAA ACAACCAGTAATGAGGTGTGTGTATATAGACCCCACTTCTAGTTATATCCAACTAGCTCAGCGAAATCGTATAACTTTTT TTCGTGAATTCGGTAATGAAACTGTAGTAGTACAAAATAGAGAAAAAAGTAAGGCAGAATATGAGTGGGAAGAGTATAAA AAATATATAGATGAGAAAACTGTTGCCTTTAGTGACGCTTTTCGTACTCTAAAAAGTACTTATGAATCTATAATAAAGGA GAAGAAAGCGATAGCAAATGATGATTTGGAGTCGTCCAATAAAATCGATATATTGATAAACGAGATTCTTCTACCTTTAA AGTACTTAATCAAGCATTCTGCTTTTCAAGAAGAGCAAGAGTGTCGAATGGTATATGTGACCTCAATAAATGCGCCTGAA GTTAATATTGCACATAAAAAGCTTCTATTTGTTGAGTACGAAGCTGAAGTAAAAGAGACTCTTAACAAAGTATATATTGC GCCCGCCGCAACTGAATATCAGCTTTACTTAGCTTGGCTACTCCGTAATACTGATGTCAAAATCGAACTCTCAAATAACC CTTATCGCCAAATTTAA
Upstream 100 bases:
>100_bases GGCAGGTGATAAGGCTGGCTCAAAAATGGCAAAAGCTGAAAAACTGGGCGTTAAAGTAGTGGGTGAAGAAGAGTTTTTGG TGTTGGTTGGGGAGTAGAGT
Downstream 100 bases:
>100_bases TATCTTTTAATGGCGTGTGATACGAAATAAAAAACACGCTATTAACTTCTACTCCGCCATCTCACCATGCGCCTTCACTT CACCTTTCTTACCATCTGGC
Product: UDP-n-acetylglucosamine-peptide-n- acetylglucosaminyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSVDNMENLDEETRKKIEKLLKVTREKDGNESYASAQIDKGLIYYNLNQRKQSYESFNNINKSDSLTRYMMAQFGMGGML AGDSKFNEALKVWSNIKGLGDSLETAGLKFRVGVALLEDSFSEYDEAKQYFIEAIEYYPYESYCYQKICNLLSDSRLKVA GKKSLQLLNKTLEIVEILKLDFEPDSSDNKSPERKLAHYTNTSITNLLLEKNEDGSLPSFFRLNTINNVNDPSEGHLLVN YLKGIRENSFYAPDFDKDLHAFISCFTFNHDSLNQFRLYGKEADKEASGVSLVFKKEFFQLDNSLGGLSFLSFESNIQSA NRDISTLVINKHSSMKESLSSKTRVSKQPVMRCVYIDPTSSYIQLAQRNRITFFREFGNETVVVQNREKSKAEYEWEEYK KYIDEKTVAFSDAFRTLKSTYESIIKEKKAIANDDLESSNKIDILINEILLPLKYLIKHSAFQEEQECRMVYVTSINAPE VNIAHKKLLFVEYEAEVKETLNKVYIAPAATEYQLYLAWLLRNTDVKIELSNNPYRQI
Sequences:
>Translated_538_residues MSVDNMENLDEETRKKIEKLLKVTREKDGNESYASAQIDKGLIYYNLNQRKQSYESFNNINKSDSLTRYMMAQFGMGGML AGDSKFNEALKVWSNIKGLGDSLETAGLKFRVGVALLEDSFSEYDEAKQYFIEAIEYYPYESYCYQKICNLLSDSRLKVA GKKSLQLLNKTLEIVEILKLDFEPDSSDNKSPERKLAHYTNTSITNLLLEKNEDGSLPSFFRLNTINNVNDPSEGHLLVN YLKGIRENSFYAPDFDKDLHAFISCFTFNHDSLNQFRLYGKEADKEASGVSLVFKKEFFQLDNSLGGLSFLSFESNIQSA NRDISTLVINKHSSMKESLSSKTRVSKQPVMRCVYIDPTSSYIQLAQRNRITFFREFGNETVVVQNREKSKAEYEWEEYK KYIDEKTVAFSDAFRTLKSTYESIIKEKKAIANDDLESSNKIDILINEILLPLKYLIKHSAFQEEQECRMVYVTSINAPE VNIAHKKLLFVEYEAEVKETLNKVYIAPAATEYQLYLAWLLRNTDVKIELSNNPYRQI >Mature_537_residues SVDNMENLDEETRKKIEKLLKVTREKDGNESYASAQIDKGLIYYNLNQRKQSYESFNNINKSDSLTRYMMAQFGMGGMLA GDSKFNEALKVWSNIKGLGDSLETAGLKFRVGVALLEDSFSEYDEAKQYFIEAIEYYPYESYCYQKICNLLSDSRLKVAG KKSLQLLNKTLEIVEILKLDFEPDSSDNKSPERKLAHYTNTSITNLLLEKNEDGSLPSFFRLNTINNVNDPSEGHLLVNY LKGIRENSFYAPDFDKDLHAFISCFTFNHDSLNQFRLYGKEADKEASGVSLVFKKEFFQLDNSLGGLSFLSFESNIQSAN RDISTLVINKHSSMKESLSSKTRVSKQPVMRCVYIDPTSSYIQLAQRNRITFFREFGNETVVVQNREKSKAEYEWEEYKK YIDEKTVAFSDAFRTLKSTYESIIKEKKAIANDDLESSNKIDILINEILLPLKYLIKHSAFQEEQECRMVYVTSINAPEV NIAHKKLLFVEYEAEVKETLNKVYIAPAATEYQLYLAWLLRNTDVKIELSNNPYRQI
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62086; Mature: 61955
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDNMENLDEETRKKIEKLLKVTREKDGNESYASAQIDKGLIYYNLNQRKQSYESFNNI CCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHCC NKSDSLTRYMMAQFGMGGMLAGDSKFNEALKVWSNIKGLGDSLETAGLKFRVGVALLEDS CCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHHH FSEYDEAKQYFIEAIEYYPYESYCYQKICNLLSDSRLKVAGKKSLQLLNKTLEIVEILKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH DFEPDSSDNKSPERKLAHYTNTSITNLLLEKNEDGSLPSFFRLNTINNVNDPSEGHLLVN CCCCCCCCCCCHHHHHHHHCCCHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCHHH YLKGIRENSFYAPDFDKDLHAFISCFTFNHDSLNQFRLYGKEADKEASGVSLVFKKEFFQ HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCEEEHHHHHHH LDNSLGGLSFLSFESNIQSANRDISTLVINKHSSMKESLSSKTRVSKQPVMRCVYIDPTS HHCCCCCEEEEEEHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCH SYIQLAQRNRITFFREFGNETVVVQNREKSKAEYEWEEYKKYIDEKTVAFSDAFRTLKST HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YESIIKEKKAIANDDLESSNKIDILINEILLPLKYLIKHSAFQEEQECRMVYVTSINAPE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC VNIAHKKLLFVEYEAEVKETLNKVYIAPAATEYQLYLAWLLRNTDVKIELSNNPYRQI CEECCEEEEEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure SVDNMENLDEETRKKIEKLLKVTREKDGNESYASAQIDKGLIYYNLNQRKQSYESFNNI CCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHCC NKSDSLTRYMMAQFGMGGMLAGDSKFNEALKVWSNIKGLGDSLETAGLKFRVGVALLEDS CCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEHHHHHHHH FSEYDEAKQYFIEAIEYYPYESYCYQKICNLLSDSRLKVAGKKSLQLLNKTLEIVEILKL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH DFEPDSSDNKSPERKLAHYTNTSITNLLLEKNEDGSLPSFFRLNTINNVNDPSEGHLLVN CCCCCCCCCCCHHHHHHHHCCCHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCHHH YLKGIRENSFYAPDFDKDLHAFISCFTFNHDSLNQFRLYGKEADKEASGVSLVFKKEFFQ HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCEEEHHHHHHH LDNSLGGLSFLSFESNIQSANRDISTLVINKHSSMKESLSSKTRVSKQPVMRCVYIDPTS HHCCCCCEEEEEEHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCH SYIQLAQRNRITFFREFGNETVVVQNREKSKAEYEWEEYKKYIDEKTVAFSDAFRTLKST HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YESIIKEKKAIANDDLESSNKIDILINEILLPLKYLIKHSAFQEEQECRMVYVTSINAPE HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC VNIAHKKLLFVEYEAEVKETLNKVYIAPAATEYQLYLAWLLRNTDVKIELSNNPYRQI CEECCEEEEEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA