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The map label for this gene is nagZ [H]

Identifier: 93005139

GI number: 93005139

Start: 370449

End: 371531

Strand: Reverse

Name: nagZ [H]

Synonym: Pcryo_0308

Alternate gene names: 93005139

Gene position: 371531-370449 (Counterclockwise)

Preceding gene: 93005141

Following gene: 93005136

Centisome position: 12.14

GC content: 47.92

Gene sequence:

>1083_bases
ATGTATGGCGTTTTAATGATTGATATCGATAGTACCGCGCTGACGGCTGAAGATGTCAGCTTAATTAGACAAGCACAAGT
TGGTGGGGTCATATTATTCGCCAGAAACGTCACCGATGCCGCCCAAGTGCGCGCGCTGTGTGACGATATACGTTGTCACA
ATGCTGACATTCTGATTGGGGTCGATCAAGAAGGCGGACGCGTTGCCAGATTGCGTAACGGTTTTACGCCACTGCCAGCA
ATGGGAAGACTTGGTGAATTATTTAACCAAGACCCCAATCGCGCTCTAGACTGTGCATATGATTGTGGTTATTTGATGGC
ATCAGAAGTATTAGCAGCGGGCATTGATTTAAGCTTTGCACCGGTGCTCGATAGAGATGGTATCAGCCAAGTTATCGGTG
ATCGCAGCTTCCACCATGAGCCGCAAGCTATCACTGCTTTGGCAGCACAATTTATGCGCGGTATGAAAGCCGCTGGGATG
GCAACGACGGGCAAGCATTTCCCTGGTCACGGTGCAATAGCCCCCGACTCGCATGTTGCTGAAGCCATCGATGATCGTAG
CTTAGATGAGATTATGAACAGTGATATGCAGCCATTTGCGCAAACGTTGCCTTGGCTTGATGCTTTGATGCCAGCACATG
TGATTTTTTCGCAAGTAGATAATAAACCAGCGGGTTTTTCTAAGATTTGGCTCAAAGACATTATTCGTGAGCAGCTAAAT
TTTGACGGGGTATTGTTTTCTGATGACTTGTCTATGGCAGGGGCAAAAGCTGCGGGTGATGTCAGTGCGCGCGTCAAAGC
AGCGATCGAAGCTGGCTGCGATATTGCTTTGGTTTGTAATGATCGCGTCGCGGCTCATGAAGCAGCAAAAGCGGCGCAAG
AGCTGCCCTATCCCAATCAAAAACGCATCAAAACCATGTGTGGACAGATACCCGCTTGGCAAGGCGACCTTGAATCGACT
TGTCAGCAGTTTGACTATTGGCAACAAGCAAAAGAAAATATCTCGCAGACGTTCTTTCCTACTGCATTAGACTCTAAGGC
ATCCGCTAATCTTGAGCTAAGAGACCCAACAAGTTACATCTAA

Upstream 100 bases:

>100_bases
ATAATAAGCCCCTGATAGCGATGAATAATAGATGTCATTTCTCATGATTTTTTAGTTTACCGTAGCATATAACAATATAT
AACCTCATAAGGATCACGCA

Downstream 100 bases:

>100_bases
TAAGTGGCAATCAAGTTAATTTAATATAGAAGAATATACAGAACAAAAACCGCACCTTGATTAAGATGCGGTTTTTCTAA
TTTATAGTTTAATTCAATGT

Product: beta-hexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MYGVLMIDIDSTALTAEDVSLIRQAQVGGVILFARNVTDAAQVRALCDDIRCHNADILIGVDQEGGRVARLRNGFTPLPA
MGRLGELFNQDPNRALDCAYDCGYLMASEVLAAGIDLSFAPVLDRDGISQVIGDRSFHHEPQAITALAAQFMRGMKAAGM
ATTGKHFPGHGAIAPDSHVAEAIDDRSLDEIMNSDMQPFAQTLPWLDALMPAHVIFSQVDNKPAGFSKIWLKDIIREQLN
FDGVLFSDDLSMAGAKAAGDVSARVKAAIEAGCDIALVCNDRVAAHEAAKAAQELPYPNQKRIKTMCGQIPAWQGDLEST
CQQFDYWQQAKENISQTFFPTALDSKASANLELRDPTSYI

Sequences:

>Translated_360_residues
MYGVLMIDIDSTALTAEDVSLIRQAQVGGVILFARNVTDAAQVRALCDDIRCHNADILIGVDQEGGRVARLRNGFTPLPA
MGRLGELFNQDPNRALDCAYDCGYLMASEVLAAGIDLSFAPVLDRDGISQVIGDRSFHHEPQAITALAAQFMRGMKAAGM
ATTGKHFPGHGAIAPDSHVAEAIDDRSLDEIMNSDMQPFAQTLPWLDALMPAHVIFSQVDNKPAGFSKIWLKDIIREQLN
FDGVLFSDDLSMAGAKAAGDVSARVKAAIEAGCDIALVCNDRVAAHEAAKAAQELPYPNQKRIKTMCGQIPAWQGDLEST
CQQFDYWQQAKENISQTFFPTALDSKASANLELRDPTSYI
>Mature_360_residues
MYGVLMIDIDSTALTAEDVSLIRQAQVGGVILFARNVTDAAQVRALCDDIRCHNADILIGVDQEGGRVARLRNGFTPLPA
MGRLGELFNQDPNRALDCAYDCGYLMASEVLAAGIDLSFAPVLDRDGISQVIGDRSFHHEPQAITALAAQFMRGMKAAGM
ATTGKHFPGHGAIAPDSHVAEAIDDRSLDEIMNSDMQPFAQTLPWLDALMPAHVIFSQVDNKPAGFSKIWLKDIIREQLN
FDGVLFSDDLSMAGAKAAGDVSARVKAAIEAGCDIALVCNDRVAAHEAAKAAQELPYPNQKRIKTMCGQIPAWQGDLEST
CQQFDYWQQAKENISQTFFPTALDSKASANLELRDPTSYI

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=286, Percent_Identity=48.951048951049, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 39030; Mature: 39030

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGVLMIDIDSTALTAEDVSLIRQAQVGGVILFARNVTDAAQVRALCDDIRCHNADILIG
CCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
VDQEGGRVARLRNGFTPLPAMGRLGELFNQDPNRALDCAYDCGYLMASEVLAAGIDLSFA
ECCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVLDRDGISQVIGDRSFHHEPQAITALAAQFMRGMKAAGMATTGKHFPGHGAIAPDSHVA
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
EAIDDRSLDEIMNSDMQPFAQTLPWLDALMPAHVIFSQVDNKPAGFSKIWLKDIIREQLN
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
FDGVLFSDDLSMAGAKAAGDVSARVKAAIEAGCDIALVCNDRVAAHEAAKAAQELPYPNQ
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCH
KRIKTMCGQIPAWQGDLESTCQQFDYWQQAKENISQTFFPTALDSKASANLELRDPTSYI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MYGVLMIDIDSTALTAEDVSLIRQAQVGGVILFARNVTDAAQVRALCDDIRCHNADILIG
CCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
VDQEGGRVARLRNGFTPLPAMGRLGELFNQDPNRALDCAYDCGYLMASEVLAAGIDLSFA
ECCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVLDRDGISQVIGDRSFHHEPQAITALAAQFMRGMKAAGMATTGKHFPGHGAIAPDSHVA
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
EAIDDRSLDEIMNSDMQPFAQTLPWLDALMPAHVIFSQVDNKPAGFSKIWLKDIIREQLN
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
FDGVLFSDDLSMAGAKAAGDVSARVKAAIEAGCDIALVCNDRVAAHEAAKAAQELPYPNQ
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCH
KRIKTMCGQIPAWQGDLESTCQQFDYWQQAKENISQTFFPTALDSKASANLELRDPTSYI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA