Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is fur [H]
Identifier: 93005122
GI number: 93005122
Start: 349425
End: 349859
Strand: Direct
Name: fur [H]
Synonym: Pcryo_0291
Alternate gene names: 93005122
Gene position: 349425-349859 (Clockwise)
Preceding gene: 93005120
Following gene: 93005125
Centisome position: 11.42
GC content: 42.99
Gene sequence:
>435_bases ATGGCTTCTTTTACCAATCAAGACTTACGTAGAGCGGGTCTAAAAGTAACGTTACCGCGTATCAAAATTCTAGAGCTGCT TGAGAGTGCAAAGCTGCATCATATGAGCGCAGAGGAGGTTTACAAGGCGCTAATTGAGCAAGGCGAGGATGTAGGTTTAG CGACCGTTTATCGCGTGCTGACTCAGTTTGAGCAGGCAGGTATTGTCGAGCGTCACAACTTTGAAAACAATTTATCCGTG TTTGAGATTACTCAAGAAGAGCATCACGACCATCTGGTTTGTGATAATTGCGGTAAGATTGTCGAATTTCATAATGAAGT GATTGAAGAAGAACAGCTTAAAGTAGCAGCAGAGCATGGCTTTAAGTTATCAGGTCACTCATTGGTACTATATGGTATCT GTGATGACCAAGCCTGTAAGGACAGCGTCAAGTAA
Upstream 100 bases:
>100_bases GGATGATTTTTTGCAATTACCCATTCATCACTACTGATGATTATTTACCTTATGTTTTTTGAACTTATTTGCTAAGACTT TCATAGTCAGAAGGGATATT
Downstream 100 bases:
>100_bases GCATCAACTTATCGATGAGATAAAATTAAAAAAGCCCTTATATATGATGAGGGCTTTTTTATAACGGTTTCTTAGGCATA AAAAATAATAACTATGGTTA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MASFTNQDLRRAGLKVTLPRIKILELLESAKLHHMSAEEVYKALIEQGEDVGLATVYRVLTQFEQAGIVERHNFENNLSV FEITQEEHHDHLVCDNCGKIVEFHNEVIEEEQLKVAAEHGFKLSGHSLVLYGICDDQACKDSVK
Sequences:
>Translated_144_residues MASFTNQDLRRAGLKVTLPRIKILELLESAKLHHMSAEEVYKALIEQGEDVGLATVYRVLTQFEQAGIVERHNFENNLSV FEITQEEHHDHLVCDNCGKIVEFHNEVIEEEQLKVAAEHGFKLSGHSLVLYGICDDQACKDSVK >Mature_143_residues ASFTNQDLRRAGLKVTLPRIKILELLESAKLHHMSAEEVYKALIEQGEDVGLATVYRVLTQFEQAGIVERHNFENNLSVF EITQEEHHDHLVCDNCGKIVEFHNEVIEEEQLKVAAEHGFKLSGHSLVLYGICDDQACKDSVK
Specific function: Fur acts as a repressor, employing Fe(2+) as a cofactor to bind the operator of the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=138, Percent_Identity=57.9710144927536, Blast_Score=176, Evalue=7e-46,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16330; Mature: 16198
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFTNQDLRRAGLKVTLPRIKILELLESAKLHHMSAEEVYKALIEQGEDVGLATVYRVL CCCCCCHHHHHCCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHH TQFEQAGIVERHNFENNLSVFEITQEEHHDHLVCDNCGKIVEFHNEVIEEEQLKVAAEHG HHHHHCCCHHHCCCCCCCEEEEEEHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC FKLSGHSLVLYGICDDQACKDSVK EEECCCCEEEEECCCCHHHHCCCC >Mature Secondary Structure ASFTNQDLRRAGLKVTLPRIKILELLESAKLHHMSAEEVYKALIEQGEDVGLATVYRVL CCCCCHHHHHCCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHH TQFEQAGIVERHNFENNLSVFEITQEEHHDHLVCDNCGKIVEFHNEVIEEEQLKVAAEHG HHHHHCCCHHHCCCCCCCEEEEEEHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC FKLSGHSLVLYGICDDQACKDSVK EEECCCCEEEEECCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1406286; 11586360; 12142430 [H]