Click here to switch to the map view.

The map label for this gene is 93005101

Identifier: 93005101

GI number: 93005101

Start: 320190

End: 321467

Strand: Direct

Name: 93005101

Synonym: Pcryo_0270

Alternate gene names: NA

Gene position: 320190-321467 (Clockwise)

Preceding gene: 93005100

Following gene: 93005102

Centisome position: 10.46

GC content: 32.0

Gene sequence:

>1278_bases
ATGCTTAACTTTTTTCAAATAAATAAAAATAAAGAGCTATTAATAGCTCTTTATTTTTTGCCTTTTTTTTTAGGTTGGAG
TGTAGGGTTTAATACTAGTTTTTATAATGAATTCAGGGTTATGCAGGTCATTCTACTACTATTCTTTGGATTAGTATCTT
GGGTAGACCGCTCATTTATAATTACAAAGATAGAGCTAATATTCTTTACTTATTTAGTGATTGGTTTTTTTGTGTGGGAT
CAGCCTTCCTTTGTAATCACAGAGATGCTGCTTGTTTATTTAATATATAAAAATTTTAGAATTTTAAATTATAATAATTC
GGTTACTAAAATAGTCTTATTATCAAGCTTTTTACTATTTATGTTACTGCCTTTATCGCTATGGGAGTATATAAATACGG
GCATTTACGATGCTAATTGGTATCCCTTCCCATGGAATATTCGTGTTTATGATAGTTGCATTTTAGTACTGTCTATCTTT
GGCACTTGGTTCTATATAAGTGAAAAGCAGCATAAAAATCTATATCTACTATTCTTATTTTTAGCATTTTTGGCTGTTCT
GTTAGATGCTGGTCGTTCAGCTACATTAGCGTATACCGTATTTATTATTATAATCGCTTTATACTGTAAACCTTTAAAAT
TGCCACTGATCCTAACTTATATATCTTCTTGGCTCGTGTATCTTCTCATTACTTATATAGTCAGTTCTGGCTCTAGTAGT
ATGGCTATAGCTAGAGAATCTTCTAGTGGACGTATAGATTTATGGGTAAATGGTCTGAGCTGCTGGTTACAAAAGCCTAT
ATTTGGCTGCGGTTTTTATCAATTAGAGCAATTTCCTCATCTATCTGCTCATCCCCATAATTTATTTATACAAATATTGA
CCGAAGTAGGGTTGGTAGGTTTTATATTCCTATCTTTTATCGTATTTAAAATAGCCCGTCATATCAGCTGGAATATAAAG
CAAAACTACTTTGTTATAGCAGCGTTATTTGCTATCAGTATTGATATTTCTTTATCTGGTATTTACGTTTATCCAATAAC
ACAGATGGCACTTTTATGGCTATTCGTTTTTCTATTGAAAAACTCAGCGTTTAATCATGCCCAGGATTTTACTCAAAAGA
GGGTAGTAATATCTTATTATCAGTACATATTAGCATTAGCGGTATACGTAATGATAGCCGCTTGGTTTGTGTATATAATT
ATTCAGTCTTTCGGGTTTGCTGCTAACATGCCTATAACACCTCCAAGATTTTGGGGGTATGGTTATCTCTTATTTTGA

Upstream 100 bases:

>100_bases
AGGCTCTAATACTACTTTCAACTTTAGCTGTACTACAACTGGTGGTACTAAGATGGATCAAAAATACCTACCTAAGTCTT
GTGTAGCTAGCTAATAATTA

Downstream 100 bases:

>100_bases
TTAGATTCGCCTTTTTTTATTATATTTAGGGCAATGATGGCATAAGCTGTGCACTATCCAAGTAACCTTAATAATATGAT
ATGACAGCCATGACTATGAG

Product: O-antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MLNFFQINKNKELLIALYFLPFFLGWSVGFNTSFYNEFRVMQVILLLFFGLVSWVDRSFIITKIELIFFTYLVIGFFVWD
QPSFVITEMLLVYLIYKNFRILNYNNSVTKIVLLSSFLLFMLLPLSLWEYINTGIYDANWYPFPWNIRVYDSCILVLSIF
GTWFYISEKQHKNLYLLFLFLAFLAVLLDAGRSATLAYTVFIIIIALYCKPLKLPLILTYISSWLVYLLITYIVSSGSSS
MAIARESSSGRIDLWVNGLSCWLQKPIFGCGFYQLEQFPHLSAHPHNLFIQILTEVGLVGFIFLSFIVFKIARHISWNIK
QNYFVIAALFAISIDISLSGIYVYPITQMALLWLFVFLLKNSAFNHAQDFTQKRVVISYYQYILALAVYVMIAAWFVYII
IQSFGFAANMPITPPRFWGYGYLLF

Sequences:

>Translated_425_residues
MLNFFQINKNKELLIALYFLPFFLGWSVGFNTSFYNEFRVMQVILLLFFGLVSWVDRSFIITKIELIFFTYLVIGFFVWD
QPSFVITEMLLVYLIYKNFRILNYNNSVTKIVLLSSFLLFMLLPLSLWEYINTGIYDANWYPFPWNIRVYDSCILVLSIF
GTWFYISEKQHKNLYLLFLFLAFLAVLLDAGRSATLAYTVFIIIIALYCKPLKLPLILTYISSWLVYLLITYIVSSGSSS
MAIARESSSGRIDLWVNGLSCWLQKPIFGCGFYQLEQFPHLSAHPHNLFIQILTEVGLVGFIFLSFIVFKIARHISWNIK
QNYFVIAALFAISIDISLSGIYVYPITQMALLWLFVFLLKNSAFNHAQDFTQKRVVISYYQYILALAVYVMIAAWFVYII
IQSFGFAANMPITPPRFWGYGYLLF
>Mature_425_residues
MLNFFQINKNKELLIALYFLPFFLGWSVGFNTSFYNEFRVMQVILLLFFGLVSWVDRSFIITKIELIFFTYLVIGFFVWD
QPSFVITEMLLVYLIYKNFRILNYNNSVTKIVLLSSFLLFMLLPLSLWEYINTGIYDANWYPFPWNIRVYDSCILVLSIF
GTWFYISEKQHKNLYLLFLFLAFLAVLLDAGRSATLAYTVFIIIIALYCKPLKLPLILTYISSWLVYLLITYIVSSGSSS
MAIARESSSGRIDLWVNGLSCWLQKPIFGCGFYQLEQFPHLSAHPHNLFIQILTEVGLVGFIFLSFIVFKIARHISWNIK
QNYFVIAALFAISIDISLSGIYVYPITQMALLWLFVFLLKNSAFNHAQDFTQKRVVISYYQYILALAVYVMIAAWFVYII
IQSFGFAANMPITPPRFWGYGYLLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49649; Mature: 49649

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFFQINKNKELLIALYFLPFFLGWSVGFNTSFYNEFRVMQVILLLFFGLVSWVDRSFI
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ITKIELIFFTYLVIGFFVWDQPSFVITEMLLVYLIYKNFRILNYNNSVTKIVLLSSFLLF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH
MLLPLSLWEYINTGIYDANWYPFPWNIRVYDSCILVLSIFGTWFYISEKQHKNLYLLFLF
HHHHHHHHHHHHCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
LAFLAVLLDAGRSATLAYTVFIIIIALYCKPLKLPLILTYISSWLVYLLITYIVSSGSSS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
MAIARESSSGRIDLWVNGLSCWLQKPIFGCGFYQLEQFPHLSAHPHNLFIQILTEVGLVG
EEEEECCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FIFLSFIVFKIARHISWNIKQNYFVIAALFAISIDISLSGIYVYPITQMALLWLFVFLLK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEECHHHHHHHHHHHHHHH
NSAFNHAQDFTQKRVVISYYQYILALAVYVMIAAWFVYIIIQSFGFAANMPITPPRFWGY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GYLLF
EEEEC
>Mature Secondary Structure
MLNFFQINKNKELLIALYFLPFFLGWSVGFNTSFYNEFRVMQVILLLFFGLVSWVDRSFI
CCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ITKIELIFFTYLVIGFFVWDQPSFVITEMLLVYLIYKNFRILNYNNSVTKIVLLSSFLLF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH
MLLPLSLWEYINTGIYDANWYPFPWNIRVYDSCILVLSIFGTWFYISEKQHKNLYLLFLF
HHHHHHHHHHHHCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH
LAFLAVLLDAGRSATLAYTVFIIIIALYCKPLKLPLILTYISSWLVYLLITYIVSSGSSS
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
MAIARESSSGRIDLWVNGLSCWLQKPIFGCGFYQLEQFPHLSAHPHNLFIQILTEVGLVG
EEEEECCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FIFLSFIVFKIARHISWNIKQNYFVIAALFAISIDISLSGIYVYPITQMALLWLFVFLLK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCEEEECHHHHHHHHHHHHHHH
NSAFNHAQDFTQKRVVISYYQYILALAVYVMIAAWFVYIIIQSFGFAANMPITPPRFWGY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GYLLF
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA