Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005022
Identifier: 93005022
GI number: 93005022
Start: 225110
End: 225547
Strand: Direct
Name: 93005022
Synonym: Pcryo_0191
Alternate gene names: NA
Gene position: 225110-225547 (Clockwise)
Preceding gene: 93005021
Following gene: 93005023
Centisome position: 7.36
GC content: 45.43
Gene sequence:
>438_bases ATGGGTATACAAATAGACTGGCAAGCTTTTACGCCAATTTCCTTGGTAGGCGGGCTGATGCTAGGCGTTGCAACGGTTAT CTTGCTGTTGGGCATTGGTCGTATTGCGGGTATTAGTGGTATTTTCTCAAGTCTTCTTAAACCCAAGCGCGTCGAGATGT GGCAGGTATTATTTATTGCAGGTCTGATCCTCTCGCCATTATTATATAGCTTATTTAGACCGTTACCTGATATCGAAATC AGTACCTCGATACCGTTATTAATCGGTGCAGGGCTATTGGTTGGTTTTGGGACGCGTTTAGGTTCAGGCTGTACCAGCGG ACATGGTATTTGTGGTAATGCGCGACTGTCGCCACGGTCGATGGCGGCGACAGTGACCTTTATGTTATTTGGTATTGTGA CGGTTTATATTGGTCGACATCTCTTGGGCTTAATTTAA
Upstream 100 bases:
>100_bases AACAATAAAAAATCGTTTATAGCAGTAGTACAATATCGTTGTTAAACTCAATTGAAGATATAAAACCATTTTTAATAAAA AATCAGCTTAGGTAATCATT
Downstream 100 bases:
>100_bases ACAACACATTGCTAAGACAACGTTGAATATGATTCATAAAAGCTTATATCCACGAATGAAGTGCGAGACATAATGATGCT AAAAAATATAATTGGGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGIQIDWQAFTPISLVGGLMLGVATVILLLGIGRIAGISGIFSSLLKPKRVEMWQVLFIAGLILSPLLYSLFRPLPDIEI STSIPLLIGAGLLVGFGTRLGSGCTSGHGICGNARLSPRSMAATVTFMLFGIVTVYIGRHLLGLI
Sequences:
>Translated_145_residues MGIQIDWQAFTPISLVGGLMLGVATVILLLGIGRIAGISGIFSSLLKPKRVEMWQVLFIAGLILSPLLYSLFRPLPDIEI STSIPLLIGAGLLVGFGTRLGSGCTSGHGICGNARLSPRSMAATVTFMLFGIVTVYIGRHLLGLI >Mature_144_residues GIQIDWQAFTPISLVGGLMLGVATVILLLGIGRIAGISGIFSSLLKPKRVEMWQVLFIAGLILSPLLYSLFRPLPDIEIS TSIPLLIGAGLLVGFGTRLGSGCTSGHGICGNARLSPRSMAATVTFMLFGIVTVYIGRHLLGLI
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 15279; Mature: 15148
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQIDWQAFTPISLVGGLMLGVATVILLLGIGRIAGISGIFSSLLKPKRVEMWQVLFIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GLILSPLLYSLFRPLPDIEISTSIPLLIGAGLLVGFGTRLGSGCTSGHGICGNARLSPRS HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH MAATVTFMLFGIVTVYIGRHLLGLI HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIQIDWQAFTPISLVGGLMLGVATVILLLGIGRIAGISGIFSSLLKPKRVEMWQVLFIA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GLILSPLLYSLFRPLPDIEISTSIPLLIGAGLLVGFGTRLGSGCTSGHGICGNARLSPRS HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH MAATVTFMLFGIVTVYIGRHLLGLI HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]