Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is yceG [C]
Identifier: 93004985
GI number: 93004985
Start: 181767
End: 183050
Strand: Direct
Name: yceG [C]
Synonym: Pcryo_0154
Alternate gene names: 93004985
Gene position: 181767-183050 (Clockwise)
Preceding gene: 93004983
Following gene: 93004986
Centisome position: 5.94
GC content: 46.26
Gene sequence:
>1284_bases ATGAGCACGCCAACCCCTGAAACGCCTCCTGAACGTCCTGATGATACGCTATCGAATGACCAAAAAGGTACTGCTGACGA GCGTATCGACGGGGTACCTTTGAATTCAAAGCCAGTCGATGAGACAGGTGTAGAGGAAGTTCCGCCTACAGATGTCTCGC TCATAAGTGGTAATAATAAACCACGTCATTATAAAGCCGATAACCCTTCATTCTTTATGCAGCGCGGTTATCAAGTGTTG TTGGTACTCGGGTTAATTGCTGCATTTTTCTTAGTCATGGTTTATCAGACCTTATTTGGTCGGATTGAACAGCCGCAGCA AATGGTGACGATTGAAAAGGGTCAGACCTATTACGGGTTGCTACCGCAGTGGCAACAGGAAATTCCGCTATTTTCTGCCA CGATTGCCAAGCTTTATATGAAAACGCAAGTCGATGGTCCATTGCACGCAGGTATTTACCAATTACCGGAAAACCCTACT ATTGCTGAAGCGCTACACGTGCTTGGGCAAGGGGTAAAAGCGGCGATGGTTAAAGTACAAATTATCGAGGGCAAAACCTC AAAAGATTTGTATCAGGCGCTACGTGATAACAAAGGCATCAAAAAAGAAGTGCTGACCGCTGACAGTACGAATGCTAGCA TCGCAGAAGCGTTAGATTTGGTTGGCATATTGCCGGATGCAGTTGCCAATAGTAATGATCCTATTGTCAATCACAATCTT GAGGGCTGGTTTGCCCCTGATACTTATTATTATGGGGAAGGCACTACCGACAAGAAGGTATTGACCGACTTGTACAAACG CCAACAGCAAGCGCTGACCAAGGCATGGGAAAACCGTGCGCCAAATCTCCCTTATCAGACTCCTTATGAGGCACTGGTAA TGGCATCTATTATCGAAAAAGAAACCAGTGTGGCAGCAGAGCGTCCTTTGGTCTCAGCCGTCTTTAATAATCGCTTGAAC AAAAATATGCGTATGCAGACGGATCCTACCATTATCTATGGTATGGGCAGCCGCTATGAAGGCAATATTCGCCGTAAAGA CATCGATGAAAAAACAGGCTATAACACTTATCAAATCGATGGTTTGCCGCCGACACCCATTGCACTGCCGTCAGCGGCTT CTATCGAAGCAACCTTACATCCTGCTGATAGCGCAGCGCTATATTTTGTGGCGACAGGCAATGGCGGGCATAAATTTACC AATAGCCTAGCTGAGCACAATCAAGCAGTTAAAGAGTATCTCGGTGTCATGCGTGAGAAGAAAGCTCAAACGCCGCAGCA GTAA
Upstream 100 bases:
>100_bases TGAGCTTAAACGCTAAGTTAATGGATAAGCTAAGCAAATCCCATTGAAAAATAAGCGGTTCAGTGCTAAATTCTAGCAAA CTTCTGCCTCGCGAGTGACC
Downstream 100 bases:
>100_bases CACTATTTCATGTTGCTATTTATATTGCTTTAAAAAACCATCATTTATTGAGCATTATCGTTATAAAAATAAAAGTAATG ATAACGCTCAACAATGACAT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSTPTPETPPERPDDTLSNDQKGTADERIDGVPLNSKPVDETGVEEVPPTDVSLISGNNKPRHYKADNPSFFMQRGYQVL LVLGLIAAFFLVMVYQTLFGRIEQPQQMVTIEKGQTYYGLLPQWQQEIPLFSATIAKLYMKTQVDGPLHAGIYQLPENPT IAEALHVLGQGVKAAMVKVQIIEGKTSKDLYQALRDNKGIKKEVLTADSTNASIAEALDLVGILPDAVANSNDPIVNHNL EGWFAPDTYYYGEGTTDKKVLTDLYKRQQQALTKAWENRAPNLPYQTPYEALVMASIIEKETSVAAERPLVSAVFNNRLN KNMRMQTDPTIIYGMGSRYEGNIRRKDIDEKTGYNTYQIDGLPPTPIALPSAASIEATLHPADSAALYFVATGNGGHKFT NSLAEHNQAVKEYLGVMREKKAQTPQQ
Sequences:
>Translated_427_residues MSTPTPETPPERPDDTLSNDQKGTADERIDGVPLNSKPVDETGVEEVPPTDVSLISGNNKPRHYKADNPSFFMQRGYQVL LVLGLIAAFFLVMVYQTLFGRIEQPQQMVTIEKGQTYYGLLPQWQQEIPLFSATIAKLYMKTQVDGPLHAGIYQLPENPT IAEALHVLGQGVKAAMVKVQIIEGKTSKDLYQALRDNKGIKKEVLTADSTNASIAEALDLVGILPDAVANSNDPIVNHNL EGWFAPDTYYYGEGTTDKKVLTDLYKRQQQALTKAWENRAPNLPYQTPYEALVMASIIEKETSVAAERPLVSAVFNNRLN KNMRMQTDPTIIYGMGSRYEGNIRRKDIDEKTGYNTYQIDGLPPTPIALPSAASIEATLHPADSAALYFVATGNGGHKFT NSLAEHNQAVKEYLGVMREKKAQTPQQ >Mature_426_residues STPTPETPPERPDDTLSNDQKGTADERIDGVPLNSKPVDETGVEEVPPTDVSLISGNNKPRHYKADNPSFFMQRGYQVLL VLGLIAAFFLVMVYQTLFGRIEQPQQMVTIEKGQTYYGLLPQWQQEIPLFSATIAKLYMKTQVDGPLHAGIYQLPENPTI AEALHVLGQGVKAAMVKVQIIEGKTSKDLYQALRDNKGIKKEVLTADSTNASIAEALDLVGILPDAVANSNDPIVNHNLE GWFAPDTYYYGEGTTDKKVLTDLYKRQQQALTKAWENRAPNLPYQTPYEALVMASIIEKETSVAAERPLVSAVFNNRLNK NMRMQTDPTIIYGMGSRYEGNIRRKDIDEKTGYNTYQIDGLPPTPIALPSAASIEATLHPADSAALYFVATGNGGHKFTN SLAEHNQAVKEYLGVMREKKAQTPQQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=276, Percent_Identity=44.5652173913043, Blast_Score=227, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 47258; Mature: 47127
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTPETPPERPDDTLSNDQKGTADERIDGVPLNSKPVDETGVEEVPPTDVSLISGNNK CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC PRHYKADNPSFFMQRGYQVLLVLGLIAAFFLVMVYQTLFGRIEQPQQMVTIEKGQTYYGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECC LPQWQQEIPLFSATIAKLYMKTQVDGPLHAGIYQLPENPTIAEALHVLGQGVKAAMVKVQ CCHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHCCCCEEEEEEE IIEGKTSKDLYQALRDNKGIKKEVLTADSTNASIAEALDLVGILPDAVANSNDPIVNHNL EECCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEECCC EGWFAPDTYYYGEGTTDKKVLTDLYKRQQQALTKAWENRAPNLPYQTPYEALVMASIIEK CCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ETSVAAERPLVSAVFNNRLNKNMRMQTDPTIIYGMGSRYEGNIRRKDIDEKTGYNTYQID HHHHHHHCHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCCCCCCCCCHHCCCCEEEEC GLPPTPIALPSAASIEATLHPADSAALYFVATGNGGHKFTNSLAEHNQAVKEYLGVMREK CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH KAQTPQQ HCCCCCC >Mature Secondary Structure STPTPETPPERPDDTLSNDQKGTADERIDGVPLNSKPVDETGVEEVPPTDVSLISGNNK CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC PRHYKADNPSFFMQRGYQVLLVLGLIAAFFLVMVYQTLFGRIEQPQQMVTIEKGQTYYGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECC LPQWQQEIPLFSATIAKLYMKTQVDGPLHAGIYQLPENPTIAEALHVLGQGVKAAMVKVQ CCHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHCCCCEEEEEEE IIEGKTSKDLYQALRDNKGIKKEVLTADSTNASIAEALDLVGILPDAVANSNDPIVNHNL EECCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEECCC EGWFAPDTYYYGEGTTDKKVLTDLYKRQQQALTKAWENRAPNLPYQTPYEALVMASIIEK CCEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ETSVAAERPLVSAVFNNRLNKNMRMQTDPTIIYGMGSRYEGNIRRKDIDEKTGYNTYQID HHHHHHHCHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCCCCCCCCCHHCCCCEEEEC GLPPTPIALPSAASIEATLHPADSAALYFVATGNGGHKFTNSLAEHNQAVKEYLGVMREK CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH KAQTPQQ HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]