Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is ybiI [H]
Identifier: 93004964
GI number: 93004964
Start: 155922
End: 156188
Strand: Direct
Name: ybiI [H]
Synonym: Pcryo_0133
Alternate gene names: 93004964
Gene position: 155922-156188 (Clockwise)
Preceding gene: 93004963
Following gene: 93004967
Centisome position: 5.1
GC content: 50.94
Gene sequence:
>267_bases ATGGCAGGTGGTTGGTCAAGAGATGGTGCTGAGCATGAGCAAATGGATGCGACCGTTAACGATGCGCTAGAGCGCGCACG CCGTGCATTACCGACAGGTAAAAGTGCAGAGTTTTGTGATGAATGTGGTAAGGCGATTCCAGAAGCTCGCCGTATCGCAG TACCGGGTGTGCAGCATTGTGTTGGCTGTCAATCTGAGCTTGAGCAAGAAGCAAAAGCTGCGGAATTGTTTAATCGCCGT GGCAGTAAAGACAGTCAGTTACGCTAA
Upstream 100 bases:
>100_bases GATTGAAATTGCTGATATTTAACCCCATCTATTTGTTATCAAAGACATTTATGCTCGATTAAAGATACGCATAATGAATA AAAATAAATAGGATAATAAT
Downstream 100 bases:
>100_bases TAAAACCAATGCTGCTTAATAAAAGAGCCCCCACTATCTAAATAGTGTGGGCTTTTTTATTGGTTCTATTTTTATCAACA ATTTTTCTATCACTGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAGGWSRDGAEHEQMDATVNDALERARRALPTGKSAEFCDECGKAIPEARRIAVPGVQHCVGCQSELEQEAKAAELFNRR GSKDSQLR
Sequences:
>Translated_88_residues MAGGWSRDGAEHEQMDATVNDALERARRALPTGKSAEFCDECGKAIPEARRIAVPGVQHCVGCQSELEQEAKAAELFNRR GSKDSQLR >Mature_87_residues AGGWSRDGAEHEQMDATVNDALERARRALPTGKSAEFCDECGKAIPEARRIAVPGVQHCVGCQSELEQEAKAAELFNRRG SKDSQLR
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 dksA C4-type zinc finger [H]
Homologues:
Organism=Escherichia coli, GI1787022, Length=88, Percent_Identity=52.2727272727273, Blast_Score=99, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020460 - InterPro: IPR000962 - InterPro: IPR020458 [H]
Pfam domain/function: PF01258 zf-dskA_traR [H]
EC number: NA
Molecular weight: Translated: 9600; Mature: 9469
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGWSRDGAEHEQMDATVNDALERARRALPTGKSAEFCDECGKAIPEARRIAVPGVQHC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VGCQSELEQEAKAAELFNRRGSKDSQLR HCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AGGWSRDGAEHEQMDATVNDALERARRALPTGKSAEFCDECGKAIPEARRIAVPGVQHC CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VGCQSELEQEAKAAELFNRRGSKDSQLR HCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503 [H]