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The map label for this gene is rimP [H]

Identifier: 93004903

GI number: 93004903

Start: 82297

End: 82797

Strand: Direct

Name: rimP [H]

Synonym: Pcryo_0072

Alternate gene names: 93004903

Gene position: 82297-82797 (Clockwise)

Preceding gene: 93004902

Following gene: 93004904

Centisome position: 2.69

GC content: 42.32

Gene sequence:

>501_bases
ATGAAGCTTTCGACCAAAGTTACAGAATTGACTAATATCATTGCCCCTGCCGTCGCGGCTTGCGATGTGGCACTATGGGG
TATAGAGTTTGCACCACAGGGCAATCGCTCTTTGTTACGCATTTATATTGAGGCATTGCCAGAAGAGCAAGCTCAAAATA
AACAAGTAACGATTGAAAACTGTGCAGCAGTGAATCACCAAGTGAGCGGTATTCTTGAAGTTCATGACCCGATTTCCGGT
GAGTTTATTTTAGAAGTCTCTTCACCTGGTTTTGACCGTGCGTTCTTTTCAGATGAGCAAATGCATGCTTATGTCGGTCA
GACAGTGAGCTTGCGTTTGATACAAGCGATTGGTGAAGGTGATAAAAAACGCCGTAAAGCAACTGGTACTCTAAACAGTA
TCGATGCCACCTCTTTAAAGCTGACTGCCACTGATGGTGAGCAGTTTGAGATTGCATTAAGCAATATTGATAAAGCCAAT
TTAATTTATGAAGATGCTTAA

Upstream 100 bases:

>100_bases
TTTAAATAACGATAGGTTCTTATTAAATAATGATGAAGAAAAACTTCAGCAGGATTTATTAAGTAAGATAGATAAGTGAA
TAGGAAAATATAAATAGATT

Downstream 100 bases:

>100_bases
TCTATTCGCTATTAGACCTTTTAGTGTATAAACGCAGTTAGTCTAATAGTTTAGATGGCTGATGGTGAAAATATAGAGTA
AGTCAAAAATTATAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNHQVSGILEVHDPISG
EFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRKATGTLNSIDATSLKLTATDGEQFEIALSNIDKAN
LIYEDA

Sequences:

>Translated_166_residues
MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNHQVSGILEVHDPISG
EFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRKATGTLNSIDATSLKLTATDGEQFEIALSNIDKAN
LIYEDA
>Mature_166_residues
MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIENCAAVNHQVSGILEVHDPISG
EFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEGDKKRRKATGTLNSIDATSLKLTATDGEQFEIALSNIDKAN
LIYEDA

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=160, Percent_Identity=40, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 18091; Mature: 18091

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIEN
CCCCHHHHHHHHHHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHCCCHHHCCCEEEEHH
CAAVNHQVSGILEVHDPISGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEG
HHHHCHHHCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCC
DKKRRKATGTLNSIDATSLKLTATDGEQFEIALSNIDKANLIYEDA
CHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MKLSTKVTELTNIIAPAVAACDVALWGIEFAPQGNRSLLRIYIEALPEEQAQNKQVTIEN
CCCCHHHHHHHHHHHHHHHHHHHHEECEEECCCCCHHHHHHHHHHCCCHHHCCCEEEEHH
CAAVNHQVSGILEVHDPISGEFILEVSSPGFDRAFFSDEQMHAYVGQTVSLRLIQAIGEG
HHHHCHHHCEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCC
DKKRRKATGTLNSIDATSLKLTATDGEQFEIALSNIDKANLIYEDA
CHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA