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The map label for this gene is cbpA [H]

Identifier: 93004878

GI number: 93004878

Start: 56054

End: 57046

Strand: Direct

Name: cbpA [H]

Synonym: Pcryo_0047

Alternate gene names: 93004878

Gene position: 56054-57046 (Clockwise)

Preceding gene: 93004876

Following gene: 93004879

Centisome position: 1.83

GC content: 43.81

Gene sequence:

>993_bases
ATGGCAGAAAAAAACTACTATGACATTTTAGGGGTCAACAAAGACGCCTCAGACGCCGATATTAAAAAAAGATATCGTAA
GCTCGTCCGTCAATATCATCCAGATGTCAGCGATGCGCCAGATGCCGATAATAAGATTGCTGAGATTAATAATGCTTATG
AAACCATCAGAGATAAGGACAAGCGTGCTGAATATGATGCGATGCTAAACAATCCTTTTGCTGGTCAAGGTGGCGGTTTT
GGCGGGCAAGCAGGTGCTGGTCAGGGCGGCTTCCGTTGGGAAGATATCAAAGATCAGTTTGGGGAAGGTGAGGCTTATGG
CGATGGAGGTTTCCGCTTCGATGATATTTTTTCGGCATTTGGACGCGGCGCACGCGGACAAAATAGTGGACAGGCGGGTG
GTCAGTCACAGTATGGCGGCTTTAGCAACCAAGATAGCAAAGGTCAAGATCAACATGCCGAGATTACTGTTGATTTGGCT
TCGGTCTATAACGGTGATGACTATAGTATTAAGTTAAATGTTCCGGTGCGTCAGCCAAATGGCAGTGTGGGCTACGATAA
TAAAACCCTTAAAATTAAAATCCCTAAAGGCATTACGGATGGCAAGCAAATTCGATTAGCTGGACAAGGAGCGGCTGGCA
GTGGTAATGGTAAAAATGGTGATTTATTTTTAAAGGTTAAAATCCGTCATGCTTCAAATATCCGTATCGAAGGCGCAGAT
ATTTACCAAACTGTAAACATCGCCCCATGGGAGGCAGCACTGGGTGAAAAAATTAATGTTAATACGCCAGCGGGCACACT
AGGTGTGACAATTCCTAAAAATAGCAAGTCAGGCAGCAATTTACGCTTAAAAGGCAAAGGTATTCCTGCTAAAGAAGCAG
GCGATTTATACTTAACCCTAAATATTGTCAATCCCGATATCAATAGTGAAGCGGAAACCAACGCTTATGAAGCACTAAAA
AAAGCCTTCGCTGACACAACCATTGAGCGATAA

Upstream 100 bases:

>100_bases
TAGGGTCACAATCTGTTATATCGCCAACCTAATTTCGATTACTAGCGTTTACAATTGGCATTTCATTATTATTAATAGAT
CTTATTTTGAGGAACATAAC

Downstream 100 bases:

>100_bases
ACAAATAGATTTATAAAAGCCGTTTAATACCCTAATAGAGATGTAGACGATAACGATAAAATAAAGAAAAACGAGGATAA
TCGCTATGAAACACTCGCCT

Product: heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MAEKNYYDILGVNKDASDADIKKRYRKLVRQYHPDVSDAPDADNKIAEINNAYETIRDKDKRAEYDAMLNNPFAGQGGGF
GGQAGAGQGGFRWEDIKDQFGEGEAYGDGGFRFDDIFSAFGRGARGQNSGQAGGQSQYGGFSNQDSKGQDQHAEITVDLA
SVYNGDDYSIKLNVPVRQPNGSVGYDNKTLKIKIPKGITDGKQIRLAGQGAAGSGNGKNGDLFLKVKIRHASNIRIEGAD
IYQTVNIAPWEAALGEKINVNTPAGTLGVTIPKNSKSGSNLRLKGKGIPAKEAGDLYLTLNIVNPDINSEAETNAYEALK
KAFADTTIER

Sequences:

>Translated_330_residues
MAEKNYYDILGVNKDASDADIKKRYRKLVRQYHPDVSDAPDADNKIAEINNAYETIRDKDKRAEYDAMLNNPFAGQGGGF
GGQAGAGQGGFRWEDIKDQFGEGEAYGDGGFRFDDIFSAFGRGARGQNSGQAGGQSQYGGFSNQDSKGQDQHAEITVDLA
SVYNGDDYSIKLNVPVRQPNGSVGYDNKTLKIKIPKGITDGKQIRLAGQGAAGSGNGKNGDLFLKVKIRHASNIRIEGAD
IYQTVNIAPWEAALGEKINVNTPAGTLGVTIPKNSKSGSNLRLKGKGIPAKEAGDLYLTLNIVNPDINSEAETNAYEALK
KAFADTTIER
>Mature_329_residues
AEKNYYDILGVNKDASDADIKKRYRKLVRQYHPDVSDAPDADNKIAEINNAYETIRDKDKRAEYDAMLNNPFAGQGGGFG
GQAGAGQGGFRWEDIKDQFGEGEAYGDGGFRFDDIFSAFGRGARGQNSGQAGGQSQYGGFSNQDSKGQDQHAEITVDLAS
VYNGDDYSIKLNVPVRQPNGSVGYDNKTLKIKIPKGITDGKQIRLAGQGAAGSGNGKNGDLFLKVKIRHASNIRIEGADI
YQTVNIAPWEAALGEKINVNTPAGTLGVTIPKNSKSGSNLRLKGKGIPAKEAGDLYLTLNIVNPDINSEAETNAYEALKK
AFADTTIER

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=336, Percent_Identity=26.7857142857143, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI205360840, Length=336, Percent_Identity=26.7857142857143, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI6631085, Length=339, Percent_Identity=29.7935103244838, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI5453690, Length=348, Percent_Identity=25.5747126436782, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI56549115, Length=335, Percent_Identity=27.4626865671642, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI201862518, Length=335, Percent_Identity=27.4626865671642, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI201862587, Length=335, Percent_Identity=27.4626865671642, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI9558755, Length=131, Percent_Identity=39.6946564885496, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI7706495, Length=371, Percent_Identity=24.7978436657682, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI72534740, Length=63, Percent_Identity=50.7936507936508, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI39204547, Length=315, Percent_Identity=25.7142857142857, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI22749377, Length=63, Percent_Identity=49.2063492063492, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI56687498, Length=157, Percent_Identity=31.2101910828025, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI88501736, Length=135, Percent_Identity=37.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI27151736, Length=135, Percent_Identity=37.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI194306642, Length=63, Percent_Identity=46.031746031746, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI194306640, Length=63, Percent_Identity=46.031746031746, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787235, Length=330, Percent_Identity=36.3636363636364, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1786197, Length=374, Percent_Identity=27.807486631016, Blast_Score=123, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17534355, Length=331, Percent_Identity=27.4924471299094, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538236, Length=124, Percent_Identity=36.2903225806452, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17553096, Length=66, Percent_Identity=43.9393939393939, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17553098, Length=66, Percent_Identity=43.9393939393939, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=143, Percent_Identity=33.5664335664336, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=182, Percent_Identity=31.3186813186813, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322388, Length=76, Percent_Identity=44.7368421052632, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24658562, Length=334, Percent_Identity=27.8443113772455, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24658555, Length=334, Percent_Identity=27.8443113772455, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI85726398, Length=344, Percent_Identity=26.453488372093, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19920464, Length=336, Percent_Identity=26.4880952380952, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI18858081, Length=348, Percent_Identity=25.8620689655172, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI18859921, Length=73, Percent_Identity=41.0958904109589, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24668492, Length=63, Percent_Identity=46.031746031746, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI20129487, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584014, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552813, Length=67, Percent_Identity=47.7611940298507, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45549272, Length=67, Percent_Identity=47.7611940298507, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552811, Length=67, Percent_Identity=47.7611940298507, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 35493; Mature: 35361

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKNYYDILGVNKDASDADIKKRYRKLVRQYHPDVSDAPDADNKIAEINNAYETIRDKD
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KRAEYDAMLNNPFAGQGGGFGGQAGAGQGGFRWEDIKDQFGEGEAYGDGGFRFDDIFSAF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHH
GRGARGQNSGQAGGQSQYGGFSNQDSKGQDQHAEITVDLASVYNGDDYSIKLNVPVRQPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEECCCCEEEEEEEEEECCC
GSVGYDNKTLKIKIPKGITDGKQIRLAGQGAAGSGNGKNGDLFLKVKIRHASNIRIEGAD
CCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEECCC
IYQTVNIAPWEAALGEKINVNTPAGTLGVTIPKNSKSGSNLRLKGKGIPAKEAGDLYLTL
EEEEECCCCHHHHCCCEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEE
NIVNPDINSEAETNAYEALKKAFADTTIER
EEECCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEKNYYDILGVNKDASDADIKKRYRKLVRQYHPDVSDAPDADNKIAEINNAYETIRDKD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KRAEYDAMLNNPFAGQGGGFGGQAGAGQGGFRWEDIKDQFGEGEAYGDGGFRFDDIFSAF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHH
GRGARGQNSGQAGGQSQYGGFSNQDSKGQDQHAEITVDLASVYNGDDYSIKLNVPVRQPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEECCCCEEEEEEEEEECCC
GSVGYDNKTLKIKIPKGITDGKQIRLAGQGAAGSGNGKNGDLFLKVKIRHASNIRIEGAD
CCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEECCC
IYQTVNIAPWEAALGEKINVNTPAGTLGVTIPKNSKSGSNLRLKGKGIPAKEAGDLYLTL
EEEEECCCCHHHHCCCEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEE
NIVNPDINSEAETNAYEALKKAFADTTIER
EEECCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA