Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93004867
Identifier: 93004867
GI number: 93004867
Start: 43185
End: 44105
Strand: Direct
Name: 93004867
Synonym: Pcryo_0036
Alternate gene names: NA
Gene position: 43185-44105 (Clockwise)
Preceding gene: 93004866
Following gene: 93004876
Centisome position: 1.41
GC content: 43.76
Gene sequence:
>921_bases ATGAATAAGTTTAGTGAAAATCTAATAGCGATTTTTGGTCGAAAGCTGGCTATTATAAAAACTGTCAAAACCATAAGTTA TGGACGTCAGATAGCATTTATCCTAAGTTTAACTGTAGTGCCAATAGTTGTACAAGCAGCTGCTTATCAAACCTATGTCA TTCATACGTATGGCGGTGATGCATTGCTACCTTCCGTTCGTCAGCAGTTAAATGCCAGTCGCGACGGCGGCACGGTGTCG ATTTATCAAGATAAGCTAGTGCTTCGTACCACTGCCAGCAACTATCAGGCAGTACAAAAGCTATTGGCACAGATTGACCG TCAGCCACAGGCATTGACGGTCGCTGTGCGTGTTGGCAATAATAGCAGTGCTCAGGATAATATTCAGCAAGGTCGAGTCA CTATCAGCAATAGCGGTATTCAAGGCGTAGGGATTATCAACCAGAGTAATAGCCAACAACAAACAAATAATTTATATCAA GTACAAACCTTGTCAGGTAGTGCCGCCAGCATTAGCACTGGTACACTCTACGCACTAAATCAAACCTATACTGCCAATAG TTATCCAACCTATCCAGCTTACAACCGTCCAGCAGGAAGGATTATTATCCAGCAGCAGGTCTTATTGCCAACGAGCCAAG GTATTGCGGTTACGCCAAGACTGTTACCGAATGGACAAGTCGAAGTACAATTGACCCAAGTTGAAGAAAAGCTCGTGCGT GCCAATCCTTCTTACAATCGCTATGGTTACAATAGTAGTGTGCAAGGGCAAAGATTGAATAGCACCATTATTGTGCCACG TGGACAATGGGTGACTATCGGGCAAATCTCTCAAAACAGCCAAAATCAGACCGCAGGTTATGGTGGCAACCAAAACAATA GCCGTAGCAATGATGTGCCAATATCGCTACTAGTACAGTAG
Upstream 100 bases:
>100_bases CTTTAACGAACAAGGTTTGAATTATTAAGGTTTTTTCTTATGGTTTGGTAGCTGCTGAGTATGGCTTTTGATAGCGTTTA ACTATTGCTAGAGGTCAATT
Downstream 100 bases:
>100_bases CTAATGATAAATACTATAGCGAAATAAACATAAAAAAGCGCGGCACTGTTATTCACAATGCCGCGCTTTTTATAGTAACG ATTATTTATCACAAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNKFSENLIAIFGRKLAIIKTVKTISYGRQIAFILSLTVVPIVVQAAAYQTYVIHTYGGDALLPSVRQQLNASRDGGTVS IYQDKLVLRTTASNYQAVQKLLAQIDRQPQALTVAVRVGNNSSAQDNIQQGRVTISNSGIQGVGIINQSNSQQQTNNLYQ VQTLSGSAASISTGTLYALNQTYTANSYPTYPAYNRPAGRIIIQQQVLLPTSQGIAVTPRLLPNGQVEVQLTQVEEKLVR ANPSYNRYGYNSSVQGQRLNSTIIVPRGQWVTIGQISQNSQNQTAGYGGNQNNSRSNDVPISLLVQ
Sequences:
>Translated_306_residues MNKFSENLIAIFGRKLAIIKTVKTISYGRQIAFILSLTVVPIVVQAAAYQTYVIHTYGGDALLPSVRQQLNASRDGGTVS IYQDKLVLRTTASNYQAVQKLLAQIDRQPQALTVAVRVGNNSSAQDNIQQGRVTISNSGIQGVGIINQSNSQQQTNNLYQ VQTLSGSAASISTGTLYALNQTYTANSYPTYPAYNRPAGRIIIQQQVLLPTSQGIAVTPRLLPNGQVEVQLTQVEEKLVR ANPSYNRYGYNSSVQGQRLNSTIIVPRGQWVTIGQISQNSQNQTAGYGGNQNNSRSNDVPISLLVQ >Mature_306_residues MNKFSENLIAIFGRKLAIIKTVKTISYGRQIAFILSLTVVPIVVQAAAYQTYVIHTYGGDALLPSVRQQLNASRDGGTVS IYQDKLVLRTTASNYQAVQKLLAQIDRQPQALTVAVRVGNNSSAQDNIQQGRVTISNSGIQGVGIINQSNSQQQTNNLYQ VQTLSGSAASISTGTLYALNQTYTANSYPTYPAYNRPAGRIIIQQQVLLPTSQGIAVTPRLLPNGQVEVQLTQVEEKLVR ANPSYNRYGYNSSVQGQRLNSTIIVPRGQWVTIGQISQNSQNQTAGYGGNQNNSRSNDVPISLLVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33288; Mature: 33288
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFSENLIAIFGRKLAIIKTVKTISYGRQIAFILSLTVVPIVVQAAAYQTYVIHTYGGD CCCHHHHHHHHHCCCEEEHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCEEEEEEEEECCC ALLPSVRQQLNASRDGGTVSIYQDKLVLRTTASNYQAVQKLLAQIDRQPQALTVAVRVGN HHHHHHHHHHCCCCCCCEEEEEECEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECC NSSAQDNIQQGRVTISNSGIQGVGIINQSNSQQQTNNLYQVQTLSGSAASISTGTLYALN CCCCCCHHHHCEEEEECCCCEEEEEEECCCCCHHHCCEEEEEEECCCCCEECCCEEEEEE QTYTANSYPTYPAYNRPAGRIIIQQQVLLPTSQGIAVTPRLLPNGQVEVQLTQVEEKLVR CEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECCEECCCCEEEEEEEHHHHHHHH ANPSYNRYGYNSSVQGQRLNSTIIVPRGQWVTIGQISQNSQNQTAGYGGNQNNSRSNDVP CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC ISLLVQ EEEEEC >Mature Secondary Structure MNKFSENLIAIFGRKLAIIKTVKTISYGRQIAFILSLTVVPIVVQAAAYQTYVIHTYGGD CCCHHHHHHHHHCCCEEEHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCEEEEEEEEECCC ALLPSVRQQLNASRDGGTVSIYQDKLVLRTTASNYQAVQKLLAQIDRQPQALTVAVRVGN HHHHHHHHHHCCCCCCCEEEEEECEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECC NSSAQDNIQQGRVTISNSGIQGVGIINQSNSQQQTNNLYQVQTLSGSAASISTGTLYALN CCCCCCHHHHCEEEEECCCCEEEEEEECCCCCHHHCCEEEEEEECCCCCEECCCEEEEEE QTYTANSYPTYPAYNRPAGRIIIQQQVLLPTSQGIAVTPRLLPNGQVEVQLTQVEEKLVR CEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECCEECCCCEEEEEEEHHHHHHHH ANPSYNRYGYNSSVQGQRLNSTIIVPRGQWVTIGQISQNSQNQTAGYGGNQNNSRSNDVP CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC ISLLVQ EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA