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The map label for this gene is rbn [C]

Identifier: 92113961

GI number: 92113961

Start: 2095471

End: 2096376

Strand: Direct

Name: rbn [C]

Synonym: Csal_1838

Alternate gene names: 92113961

Gene position: 2095471-2096376 (Clockwise)

Preceding gene: 92113959

Following gene: 92113962

Centisome position: 56.69

GC content: 62.58

Gene sequence:

>906_bases
TTGTGGCTGGAGCACAATGCGTTCAGTTACGCCGGCTCCCTGGCGTTCTATACGCTGTTTTCACTGGCGCCGACCATCAT
CATTGCCGTGACCGTGATAGGCCTGATATTGGGAGAAGAAGCGGCTCAGGGGCAGATCGTCGCCCAGTTGCAGGACACCA
TGGGTCAGGATGCCGCCATGGCGGTGCAGCAGGCGGTCGCCCAGTCGCGTCTCGAGAGTTCCGGCCTGTTGCCGACCCTG
CTCGGGATAGGGGCCCTGGTGGTAGGGGCGACGACGGTGTTCGCGCAGATGCAGTTTTCGCTCAACACCCTCTGGGGGGT
CACGGCACGCCCCGATCGCAACAGCGTTCTGCTGTTCATCAAGCAACGCATGCTGTCGCTCACGGTGGTCCTGGCGGTCG
GTTTCATCCTCATGGTGTCACTGGTGCTGGGCGTGCTCCTGAGGGCCTTCTTCATGTATGCCAGCGACTGGGTGCCGGGC
GTCAATGCACTGCTCGGAGGCGCCGAGTTCATCGTCTCGCTGGCGGTGATCGCCTTGTTCTTCGCTGCGATCTTCAAGGT
CCTGCCGGATGTCGTGGTCAGCTGGCGGGATGTTATGGTCGGCGCCATCGTCACGGCGGTACTGTTCGCGATCGGCCGTT
ACGGCATTGCCGCGTACCTTGCCTATACTGCCACGGCATCGACCTACGGCGCGGCGGGGTCGGTGGTGCTGATCTTGCTG
TGGGTCTACTACAGCTCGTTGATCCTGCTCTACGGTGCCGCCTTCACCCGAACCCATCTCGAGGCTCGCGGCAAGCGCGT
GGTGCCGCGCAACTCGGCGGTACTGGTCAAGCGCGAACTGATCGATGCCCAGGGCAACACCGCCCTGGGCGGAAACAAGA
ACGGTGAAGGAGAGAGCCATGCATGA

Upstream 100 bases:

>100_bases
ATGGCCATTGCATGCCAAGCCATCCTCTTTTCGACAAGGAGTGTCCGTGATCAATCTCTCTCCCCGCTATTGGGGCCGTA
TCGTTGGCAACGCCGGAAAA

Downstream 100 bases:

>100_bases
TCGGTGTCTCAAGGCCTGGGTGACCGGACGCGTGCAGGGCGTGGGATTTCGCGCGGCCACCCGCGATCAGGCGCTGACCG
CCGGTGTGACCGGCTACGCT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MWLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAMAVQQAVAQSRLESSGLLPTL
LGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFIKQRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPG
VNALLGGAEFIVSLAVIALFFAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATASTYGAAGSVVLILL
WVYYSSLILLYGAAFTRTHLEARGKRVVPRNSAVLVKRELIDAQGNTALGGNKNGEGESHA

Sequences:

>Translated_301_residues
MWLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAMAVQQAVAQSRLESSGLLPTL
LGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFIKQRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPG
VNALLGGAEFIVSLAVIALFFAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATASTYGAAGSVVLILL
WVYYSSLILLYGAAFTRTHLEARGKRVVPRNSAVLVKRELIDAQGNTALGGNKNGEGESHA
>Mature_301_residues
MWLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAMAVQQAVAQSRLESSGLLPTL
LGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFIKQRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPG
VNALLGGAEFIVSLAVIALFFAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATASTYGAAGSVVLILL
WVYYSSLILLYGAAFTRTHLEARGKRVVPRNSAVLVKRELIDAQGNTALGGNKNGEGESHA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=269, Percent_Identity=26.0223048327138, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31995; Mature: 31995

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHH
AVQQAVAQSRLESSGLLPTLLGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
KQRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPGVNALLGGAEFIVSLAVIALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATASTYGAAGSVVLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WVYYSSLILLYGAAFTRTHLEARGKRVVPRNSAVLVKRELIDAQGNTALGGNKNGEGESH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure
MWLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHH
AVQQAVAQSRLESSGLLPTLLGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
KQRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPGVNALLGGAEFIVSLAVIALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATASTYGAAGSVVLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WVYYSSLILLYGAAFTRTHLEARGKRVVPRNSAVLVKRELIDAQGNTALGGNKNGEGESH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA