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The map label for this gene is infC [H]

Identifier: 92113923

GI number: 92113923

Start: 2048079

End: 2048570

Strand: Direct

Name: infC [H]

Synonym: Csal_1800

Alternate gene names: 92113923

Gene position: 2048079-2048570 (Clockwise)

Preceding gene: 92113922

Following gene: 92113924

Centisome position: 55.4

GC content: 55.89

Gene sequence:

>492_bases
ATGAACGACCGTATTCGTGTGGACGAAGTCCGCCTCATCGACAGCAGCGGCGAGCAGGTTGGTGTCGTCTCGACTCAGGA
CGCGCTGGAGCGTGCCGAGGCCGAGGGCTTGGATCTCGTCCAGATCTCCAACGCTGACCCCATCGTCTGCAAGATCATGG
ACTATGGGAAGTTTCTTTTCGAGCAGAAGAAACAGCGTTCTGCTCAGAAGAAAAAGACGAAGCAGATTCAGGTCAAGGAA
GTCAAATTCCGACCTGGTACCGACGAGGGCGACTATCAGGTGAAATTGAAAAACCTGACGCGTTTCCTCGAAGGGGGCGA
CAAAGGCAAGGTCACGCTGCGTTTTCGGGGACGTGAGATGGCGCACCAGGACATCGGCCGCAAGCTGATGGAACGGATCG
CCGCCGACCTCGAGGACATGGCGACTGTCGAATCCTTCCCCAAGATGGAAGGTCGTCAGATGATCATGATCCTGGCGCCC
AAAAAGAAGTGA

Upstream 100 bases:

>100_bases
TGCAGGAAGAAGGGGTATAAAGAACGTCAATCGATAGAACGGAGACGTAACGATCAAGCGGAATAACCAGCGCGGGCGCC
CTCAAGAGAAGCGCCCCCCA

Downstream 100 bases:

>100_bases
TCCGTTGGCAGTTTAACGGGCAGGCGGCTTCGGCTGGCCTGCCGGCCTCGGGTTTTCTGAAGAAACCGAGTGGAGTTTTC
CCTCATGCCTAAAATCAAGA

Product: translation initiation factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNDRIRVDEVRLIDSSGEQVGVVSTQDALERAEAEGLDLVQISNADPIVCKIMDYGKFLFEQKKQRSAQKKKTKQIQVKE
VKFRPGTDEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEDMATVESFPKMEGRQMIMILAP
KKK

Sequences:

>Translated_163_residues
MNDRIRVDEVRLIDSSGEQVGVVSTQDALERAEAEGLDLVQISNADPIVCKIMDYGKFLFEQKKQRSAQKKKTKQIQVKE
VKFRPGTDEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEDMATVESFPKMEGRQMIMILAP
KKK
>Mature_163_residues
MNDRIRVDEVRLIDSSGEQVGVVSTQDALERAEAEGLDLVQISNADPIVCKIMDYGKFLFEQKKQRSAQKKKTKQIQVKE
VKFRPGTDEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREMAHQDIGRKLMERIAADLEDMATVESFPKMEGRQMIMILAP
KKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=165, Percent_Identity=66.6666666666667, Blast_Score=208, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 18631; Mature: 18631

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRIRVDEVRLIDSSGEQVGVVSTQDALERAEAEGLDLVQISNADPIVCKIMDYGKFLF
CCCCEEEEEEEEECCCCCEEEEEECHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHH
EQKKQRSAQKKKTKQIQVKEVKFRPGTDEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREM
HHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEECCCHH
AHQDIGRKLMERIAADLEDMATVESFPKMEGRQMIMILAPKKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MNDRIRVDEVRLIDSSGEQVGVVSTQDALERAEAEGLDLVQISNADPIVCKIMDYGKFLF
CCCCEEEEEEEEECCCCCEEEEEECHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHHHHH
EQKKQRSAQKKKTKQIQVKEVKFRPGTDEGDYQVKLKNLTRFLEGGDKGKVTLRFRGREM
HHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEECCCHH
AHQDIGRKLMERIAADLEDMATVESFPKMEGRQMIMILAPKKK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA