Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is wcaJ [H]
Identifier: 92113816
GI number: 92113816
Start: 1923769
End: 1924809
Strand: Direct
Name: wcaJ [H]
Synonym: Csal_1693
Alternate gene names: 92113816
Gene position: 1923769-1924809 (Clockwise)
Preceding gene: 92113815
Following gene: 92113817
Centisome position: 52.04
GC content: 46.49
Gene sequence:
>1041_bases ATGTTAGTGATCTCATATCTATTAGCTAGTAGTGCTCGAGTAATGGCACAAATTATGTTGCGGCAGGCACGCTTGAGAGG ACGTGCTAGGCGCGCTGTATTTCTCGTTGGCCCTGGCCAGCAACTATTGAAGCTAGCGAAGAGTATGCGTGCTTCTCCAG GTGAAGGGTATTCGATTGCCGGTTTTGAGCGTCTCCCCCGATTACCTGATGAGCAATGTCTAGAACGGATAGTTAGGCGT GTTAGTGAAACGCAAGCTCGCGAAGTCTGGATATCAGTTCCGCTGGAAATGGGGAGTGCGGTACGAGATATTTTTTATGC GCTTCGCAATCATACCGCAGAGGTGCGTTTTTTGCCGGACTTCCCAGATATGCAGTTGTTGAACCATCGCATGAGTGAAG TCGCGGGGCATCTTTCAGTTGATCTAAGTGTTACACCTATGAGTGGCATGGCGCGTGTGCTAAAACGTATGGAAGACCTC CTTCTCGGCTTTCTAATAACAGCCATGATTCTTCCGTTTTGTTTGGCTATCGCTGTAGGAGTTAAAGTAACTTCGCCAGG GCCCATATTGTTTAAGCAGTATAGAACGGGCGCGAATGGAAAAAAATTTAAAGTTTATAAGTTTCGCTCTATGCGGATGC ACAAAGAAGAGCAAGGCCAAGTTACCCAAGCGTCGAGGTCTGATCCTCGCGTGACTCCTATAGGGTCTTTTCTTCGGCGC ACCTCCTTGGACGAGCTGCCACAGTTCTACAATGTGTTGCAAGGGCGGATGTCTATTGTGGGTCCACGGCCTCATGCGCT TTCTCATAACGAACATTACAAAGAATTAGTGGAGTCCTATATGAGACGCCACAAAGTAAAACCTGGTATTACCGGGTGGG CTCAGGTCAATGGTTTTCGTGGCGAGACTGATACTCTTGAAAAAATGGAACAGCGTGTAAAGCACGATTTATGGTATATC GACAATTGGTCGTTATGGCTGGATGTAAAAATTATTTTTTTGACTGTTTTTAAAGGTTTTGTGGGTCGGAATGCTTATTA G
Upstream 100 bases:
>100_bases GCGGCTATTACTCGTTTGGGGATTGGTCGGTGTGGTTGCTACATCGATTATCTATTTCGCCGATGCCGCCGCGCGGTACT CACGATTGTGGGTTGGTGGC
Downstream 100 bases:
>100_bases GGATTGTGCGTCTGGTTGTTTGAGGCAGTTTTTAGGCGTCTTGTAAGGACTGGGGAGTGTCTTTGAGCCTGAATTGTCTG GGCGCATGGTTTAGCTTTTT
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MLVISYLLASSARVMAQIMLRQARLRGRARRAVFLVGPGQQLLKLAKSMRASPGEGYSIAGFERLPRLPDEQCLERIVRR VSETQAREVWISVPLEMGSAVRDIFYALRNHTAEVRFLPDFPDMQLLNHRMSEVAGHLSVDLSVTPMSGMARVLKRMEDL LLGFLITAMILPFCLAIAVGVKVTSPGPILFKQYRTGANGKKFKVYKFRSMRMHKEEQGQVTQASRSDPRVTPIGSFLRR TSLDELPQFYNVLQGRMSIVGPRPHALSHNEHYKELVESYMRRHKVKPGITGWAQVNGFRGETDTLEKMEQRVKHDLWYI DNWSLWLDVKIIFLTVFKGFVGRNAY
Sequences:
>Translated_346_residues MLVISYLLASSARVMAQIMLRQARLRGRARRAVFLVGPGQQLLKLAKSMRASPGEGYSIAGFERLPRLPDEQCLERIVRR VSETQAREVWISVPLEMGSAVRDIFYALRNHTAEVRFLPDFPDMQLLNHRMSEVAGHLSVDLSVTPMSGMARVLKRMEDL LLGFLITAMILPFCLAIAVGVKVTSPGPILFKQYRTGANGKKFKVYKFRSMRMHKEEQGQVTQASRSDPRVTPIGSFLRR TSLDELPQFYNVLQGRMSIVGPRPHALSHNEHYKELVESYMRRHKVKPGITGWAQVNGFRGETDTLEKMEQRVKHDLWYI DNWSLWLDVKIIFLTVFKGFVGRNAY >Mature_346_residues MLVISYLLASSARVMAQIMLRQARLRGRARRAVFLVGPGQQLLKLAKSMRASPGEGYSIAGFERLPRLPDEQCLERIVRR VSETQAREVWISVPLEMGSAVRDIFYALRNHTAEVRFLPDFPDMQLLNHRMSEVAGHLSVDLSVTPMSGMARVLKRMEDL LLGFLITAMILPFCLAIAVGVKVTSPGPILFKQYRTGANGKKFKVYKFRSMRMHKEEQGQVTQASRSDPRVTPIGSFLRR TSLDELPQFYNVLQGRMSIVGPRPHALSHNEHYKELVESYMRRHKVKPGITGWAQVNGFRGETDTLEKMEQRVKHDLWYI DNWSLWLDVKIIFLTVFKGFVGRNAY
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=350, Percent_Identity=46.8571428571429, Blast_Score=317, Evalue=9e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 39592; Mature: 39592
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVISYLLASSARVMAQIMLRQARLRGRARRAVFLVGPGQQLLKLAKSMRASPGEGYSIA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEC GFERLPRLPDEQCLERIVRRVSETQAREVWISVPLEMGSAVRDIFYALRNHTAEVRFLPD CHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCEEEECCC FPDMQLLNHRMSEVAGHLSVDLSVTPMSGMARVLKRMEDLLLGFLITAMILPFCLAIAVG CCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VKVTSPGPILFKQYRTGANGKKFKVYKFRSMRMHKEEQGQVTQASRSDPRVTPIGSFLRR CEECCCCCHHHHHHCCCCCCCEEEEEEHHHHHHCHHHCCCHHHCCCCCCCCCHHHHHHHH TSLDELPQFYNVLQGRMSIVGPRPHALSHNEHYKELVESYMRRHKVKPGITGWAQVNGFR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC GETDTLEKMEQRVKHDLWYIDNWSLWLDVKIIFLTVFKGFVGRNAY CCHHHHHHHHHHHHHHCEEEECCEEEHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLVISYLLASSARVMAQIMLRQARLRGRARRAVFLVGPGQQLLKLAKSMRASPGEGYSIA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEC GFERLPRLPDEQCLERIVRRVSETQAREVWISVPLEMGSAVRDIFYALRNHTAEVRFLPD CHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCEEEECCC FPDMQLLNHRMSEVAGHLSVDLSVTPMSGMARVLKRMEDLLLGFLITAMILPFCLAIAVG CCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VKVTSPGPILFKQYRTGANGKKFKVYKFRSMRMHKEEQGQVTQASRSDPRVTPIGSFLRR CEECCCCCHHHHHHCCCCCCCEEEEEEHHHHHHCHHHCCCHHHCCCCCCCCCHHHHHHHH TSLDELPQFYNVLQGRMSIVGPRPHALSHNEHYKELVESYMRRHKVKPGITGWAQVNGFR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC GETDTLEKMEQRVKHDLWYIDNWSLWLDVKIIFLTVFKGFVGRNAY CCHHHHHHHHHHHHHHCEEEECCEEEHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]