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The map label for this gene is recO [H]

Identifier: 92113757

GI number: 92113757

Start: 1855516

End: 1856220

Strand: Direct

Name: recO [H]

Synonym: Csal_1633

Alternate gene names: 92113757

Gene position: 1855516-1856220 (Clockwise)

Preceding gene: 92113756

Following gene: 92113758

Centisome position: 50.19

GC content: 69.93

Gene sequence:

>705_bases
ATGACGCCCGAACCGGCCTTTTTGCTGCACAAGCGTGCCTACCGCGAGACCAGTGCCATCGTCGAGTTGCTGACCCTCGG
CCAGGGACGCGTGCGTGCCGTGGCACAGGGCGTGCAGCGCGGCGGCAGCAAGGCGCGCGGTATCCTGCAGCCGTTCTCGC
CGTTGCATGTCACCTGGAGCGGCAACGGCGACCTCAAGCGCCTGCGCCTGCTCGAAAGCCAGGGGAGTGCGGCCCTGCTG
GCCGGCGAGGGCCTGCTCTGCGGCGTCTATGCCAACGAACTCCTGGCGCGTACGCTGCCGCTGGAATACCCGGCGGGCGA
GGTGTTCTCGCTGTACGCGCTGACCCTCGAGGCACTGCCATCCCCGGCCAAGCGTGCCGGTGCGTTGAGACGCCTGGAAA
TCACCCTGCTCGAGACCCTGGATGCCGCCCCGCGCTTCGTCGACGAGCAGGAGGCGCCGCTGGATGCCTTCACCCATTAC
CGCTACCATCCCGACCAGCGCTGTTTCCGCGCGGTGCCCGCCGGCAATGGCGGTATCGACGGGCGAAGCCTCAAGTGGCT
GGCGCGGGGCGACTGGGAAGAACCCGGCCTGGCGGGCGTTGCCAAGCAGGTCACCCGGGCGGCCCTGGCGCCGTTGCTGG
GCGAGCGTCCGCTGCGCTCGCGGGAGTTGATGCGTCGGCTGGCCGAGCGTCGACGCGCTCACTAG

Upstream 100 bases:

>100_bases
GGTGAAGGTCAAGCGTGGCTGGTCCGACGACGACCGTGCCCTGAAGAGCCTCGGCTACGATCTCGACTGATTGCGCCCAC
CACGGCGCGGAGATGCCGCG

Downstream 100 bases:

>100_bases
GCTCTGCTCCAGACCTGAACCTCACACCTCCACCGTTCCACCCTTCATTGCCGAGGAATCCGTCATGCATCCGCCACGTA
TCCTGTTGGGCGTCAACATC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTPEPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWSGNGDLKRLRLLESQGSAALL
AGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALPSPAKRAGALRRLEITLLETLDAAPRFVDEQEAPLDAFTHY
RYHPDQRCFRAVPAGNGGIDGRSLKWLARGDWEEPGLAGVAKQVTRAALAPLLGERPLRSRELMRRLAERRRAH

Sequences:

>Translated_234_residues
MTPEPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWSGNGDLKRLRLLESQGSAALL
AGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALPSPAKRAGALRRLEITLLETLDAAPRFVDEQEAPLDAFTHY
RYHPDQRCFRAVPAGNGGIDGRSLKWLARGDWEEPGLAGVAKQVTRAALAPLLGERPLRSRELMRRLAERRRAH
>Mature_233_residues
TPEPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWSGNGDLKRLRLLESQGSAALLA
GEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALPSPAKRAGALRRLEITLLETLDAAPRFVDEQEAPLDAFTHYR
YHPDQRCFRAVPAGNGGIDGRSLKWLARGDWEEPGLAGVAKQVTRAALAPLLGERPLRSRELMRRLAERRRAH

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=234, Percent_Identity=37.1794871794872, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 25717; Mature: 25586

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEC
GNGDLKRLRLLESQGSAALLAGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALP
CCCCHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
SPAKRAGALRRLEITLLETLDAAPRFVDEQEAPLDAFTHYRYHPDQRCFRAVPAGNGGID
CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCC
GRSLKWLARGDWEEPGLAGVAKQVTRAALAPLLGERPLRSRELMRRLAERRRAH
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPEPAFLLHKRAYRETSAIVELLTLGQGRVRAVAQGVQRGGSKARGILQPFSPLHVTWS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEC
GNGDLKRLRLLESQGSAALLAGEGLLCGVYANELLARTLPLEYPAGEVFSLYALTLEALP
CCCCHHHHHHHHCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
SPAKRAGALRRLEITLLETLDAAPRFVDEQEAPLDAFTHYRYHPDQRCFRAVPAGNGGID
CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCC
GRSLKWLARGDWEEPGLAGVAKQVTRAALAPLLGERPLRSRELMRRLAERRRAH
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA