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The map label for this gene is yceD [C]

Identifier: 92113721

GI number: 92113721

Start: 1819354

End: 1819881

Strand: Direct

Name: yceD [C]

Synonym: Csal_1597

Alternate gene names: 92113721

Gene position: 1819354-1819881 (Clockwise)

Preceding gene: 92113719

Following gene: 92113722

Centisome position: 49.22

GC content: 62.12

Gene sequence:

>528_bases
ATGTTGACCACACGACTCCCCAAGCAGGTCGAGCCCTACAAGCTCGCCGCCAATCATGAATCCCTCGAGGGGCTGGTATC
GCTCGACGCGATGTCGCGCCTCGGCGAAGAGATCGGCGCGCAGCAAGGCGATTGCGAAGTCCGTCTGGACTTCGGCATCG
ATACCCAGGGGCGTCGCCGCATGGAGGGGCAGCTTCAGGCGGCCGTGCAGATCCCTTGCCGGCGTTGCCTGCAGCCCATG
CCCGTCACGCTGGAGAGCCGCTTTCTGCTGGGGCTTGTCAGCGATGACAGCCTGGCGAGCGAATTGCCGAGCGACTACGA
GCCGGTGTTGGTGGAAAACGAACAGCTGAATCTTCTGCCGGTGGTCGAGGATGAGCTCATCCTCAGCCTGCCTCAGGTGA
TTTATCATGATGAGGCGGATTGCCCCGTCTCGCGCGACCAGCTGGAAAGCGGCGCTGATGCCGACGTGTCGGAGCAGCCT
GCTGCAAGCCCTTTCGAGGTGCTGCGCAACTTGAAAGGCAAACTTTGA

Upstream 100 bases:

>100_bases
AGGGTCGGGCTTGTCACGTCGCAGTCTGGCGCGACATCGGGTGTCTGTACAGCGCGCTTGTTTTGACAGCGTCGGGGCGA
GTCCCTATTATTGCGCGCCT

Downstream 100 bases:

>100_bases
ATCATCGTCGACACTCTGGAGTGTAACCCATGGCAGTTCAACAGAACCGCAAGACCCGTTCCAAGCGTGGCATGCGTCGC
AGCCACGATGCGCTGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLTTRLPKQVEPYKLAANHESLEGLVSLDAMSRLGEEIGAQQGDCEVRLDFGIDTQGRRRMEGQLQAAVQIPCRRCLQPM
PVTLESRFLLGLVSDDSLASELPSDYEPVLVENEQLNLLPVVEDELILSLPQVIYHDEADCPVSRDQLESGADADVSEQP
AASPFEVLRNLKGKL

Sequences:

>Translated_175_residues
MLTTRLPKQVEPYKLAANHESLEGLVSLDAMSRLGEEIGAQQGDCEVRLDFGIDTQGRRRMEGQLQAAVQIPCRRCLQPM
PVTLESRFLLGLVSDDSLASELPSDYEPVLVENEQLNLLPVVEDELILSLPQVIYHDEADCPVSRDQLESGADADVSEQP
AASPFEVLRNLKGKL
>Mature_175_residues
MLTTRLPKQVEPYKLAANHESLEGLVSLDAMSRLGEEIGAQQGDCEVRLDFGIDTQGRRRMEGQLQAAVQIPCRRCLQPM
PVTLESRFLLGLVSDDSLASELPSDYEPVLVENEQLNLLPVVEDELILSLPQVIYHDEADCPVSRDQLESGADADVSEQP
AASPFEVLRNLKGKL

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceD [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=175, Percent_Identity=32, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19340; Mature: 19340

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTRLPKQVEPYKLAANHESLEGLVSLDAMSRLGEEIGAQQGDCEVRLDFGIDTQGRRR
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHH
MEGQLQAAVQIPCRRCLQPMPVTLESRFLLGLVSDDSLASELPSDYEPVLVENEQLNLLP
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCEEEECCCCEEEE
VVEDELILSLPQVIYHDEADCPVSRDQLESGADADVSEQPAASPFEVLRNLKGKL
CCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLTTRLPKQVEPYKLAANHESLEGLVSLDAMSRLGEEIGAQQGDCEVRLDFGIDTQGRRR
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHH
MEGQLQAAVQIPCRRCLQPMPVTLESRFLLGLVSDDSLASELPSDYEPVLVENEQLNLLP
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCEEEECCCCEEEE
VVEDELILSLPQVIYHDEADCPVSRDQLESGADADVSEQPAASPFEVLRNLKGKL
CCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]