Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92112336
Identifier: 92112336
GI number: 92112336
Start: 220634
End: 221989
Strand: Direct
Name: 92112336
Synonym: Csal_0201
Alternate gene names: NA
Gene position: 220634-221989 (Clockwise)
Preceding gene: 92112335
Following gene: 92112338
Centisome position: 5.97
GC content: 65.49
Gene sequence:
>1356_bases ATGTCTCGTACTTCTGCGCGTTCTTCACGTGACGCCAGCGACCTCTATCGGGCGGTCTGGCGCTGGCATTTCTACGCGGG TCTCATCGCGATTCCCTTTCTGATCTCGTTGGCGGTGACCGGCGGGCTCTACCTCTTCAAGGATGAGATCGACCAGTGGC TCAACGCGGACATCGTGCGCGTCGAGGCGCAATCGTCAGCGGCGGTGTCGCCGCAGCAACAGCTGGATGCGGCCATGGCG GCGCATCCCGGCGAGGCGTTTCGTTACGTGCCGCCGGCCGCCTCCAATCTTGCCGCGGAGGTCGACATCACCACCGCCGA CGGCAAGCAAGCCGTCTACGTCGACCCTTACACCGGCGAGGTCACTGGCACGATTCCCTATCGCGGCAGCGTGATGTGGA TCGTGCGCACCATCCACAGCCTCAGCTACTTCGGCGAGACGGCGAGTCTGATCATCGAGATCGTCGGCGGCTGGTCGATC CTGCTCGTGCTGACCGGAATCTATCTGTGGTGGCCGCGCGGTCGACGCGGCGGTGTGATGACGGTACGTGCGACCCCGGC GAAGCGATTGTTCTGGCGTGACCTTCACGCCGTCACCGGCATCTTCGTCGGGGGCTTCATTCTTTTTCTGGCGATGACCG GCATGCCGTGGTCCACGCTGTGGGGCAGCAAGGTCAACGAACTCGCCAACGGTCACAACTTCGGCTATCCGGATGGCGTG CGCGTCAACGTCCCGGTCTCCGACGAACGCCTGGCGGAGCGGGAGATGACTACCTGGTCGCTGGAGCAGGCGCGGCTGCC GGAATCGACGCCTGGGCGTGAGGGCGCGCCGGGCATCGGCCTCAACGGCGCGGTGAAGGCGTTCGACGCGCTGGGGCTGG CCCCAGGATATGCCGTCAGCCTGCCGAGCAGTCCTACCGGCGTCTATACCGGCTCGATCTACCCCGACGATCTTTCACGA CAGCGGGTCGTGCATCTGGACCGATATAGCGGCGAGCCACTGCTGGACATGAGCTACGCCGACTATGGCCCGTTGGGCAA GTCGCTGGAGTGGGGCATCAACGTGCACATGGGCCAGCAATATGGGCTCGCCAATCAGTTGATTCTGGCGCTGGCCTGCG CGGGGATCGTGCTGCTGTGCGTCTCGTCGGGCGTGATGTGGTGGAAGCGTCGACCGAGCGGCAAGCTGGGGATTCCCCCC GAACCCAAGGATCCCCGTCGCTTGCGCGGTGTGCTGGCGTTGCTCGCCATCGGCGGCGTGATCTTCCCGCTGGTGGGGGC CTCGATGATCGTCATGGCGGTGGTGGATGCGCTGGTACGCCGTCGCGGCGCCAGGCGCGCCGCGACGACCGCCTAG
Upstream 100 bases:
>100_bases GAGCATGGCGCGTCTGCACGTCGTGCCTGCGCCGGTGTCGTCGGCCACAGGATGGATTCGGCTACCGAGCGGTAGCCATG GCACGCTATTCGGGGGCTTC
Downstream 100 bases:
>100_bases CCAGGCAGCCGCCGATGACCGTTGCGCCCGCCCGTGTCACGCGCGGGCGGGCGCGGCCGTCGTTCATTTCATCTCGAAAC CGCGTGAGACGAGGAAGTCA
Product: peptidase
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Peptidase; Sulfite Reductase; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; PepSY-Associated TM Helix Family Protein; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Bifunctional Protein Flavoprotein Alpha-Component; Sulfite Reductase Flavoprotein Subunit Alpha; Sulfite Reductase Flavoprotein Alpha-Component; Transmembrane Protein; Transmembrane Transporter; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Iron-Regulated Transmembrane Protein
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSRTSARSSRDASDLYRAVWRWHFYAGLIAIPFLISLAVTGGLYLFKDEIDQWLNADIVRVEAQSSAAVSPQQQLDAAMA AHPGEAFRYVPPAASNLAAEVDITTADGKQAVYVDPYTGEVTGTIPYRGSVMWIVRTIHSLSYFGETASLIIEIVGGWSI LLVLTGIYLWWPRGRRGGVMTVRATPAKRLFWRDLHAVTGIFVGGFILFLAMTGMPWSTLWGSKVNELANGHNFGYPDGV RVNVPVSDERLAEREMTTWSLEQARLPESTPGREGAPGIGLNGAVKAFDALGLAPGYAVSLPSSPTGVYTGSIYPDDLSR QRVVHLDRYSGEPLLDMSYADYGPLGKSLEWGINVHMGQQYGLANQLILALACAGIVLLCVSSGVMWWKRRPSGKLGIPP EPKDPRRLRGVLALLAIGGVIFPLVGASMIVMAVVDALVRRRGARRAATTA
Sequences:
>Translated_451_residues MSRTSARSSRDASDLYRAVWRWHFYAGLIAIPFLISLAVTGGLYLFKDEIDQWLNADIVRVEAQSSAAVSPQQQLDAAMA AHPGEAFRYVPPAASNLAAEVDITTADGKQAVYVDPYTGEVTGTIPYRGSVMWIVRTIHSLSYFGETASLIIEIVGGWSI LLVLTGIYLWWPRGRRGGVMTVRATPAKRLFWRDLHAVTGIFVGGFILFLAMTGMPWSTLWGSKVNELANGHNFGYPDGV RVNVPVSDERLAEREMTTWSLEQARLPESTPGREGAPGIGLNGAVKAFDALGLAPGYAVSLPSSPTGVYTGSIYPDDLSR QRVVHLDRYSGEPLLDMSYADYGPLGKSLEWGINVHMGQQYGLANQLILALACAGIVLLCVSSGVMWWKRRPSGKLGIPP EPKDPRRLRGVLALLAIGGVIFPLVGASMIVMAVVDALVRRRGARRAATTA >Mature_450_residues SRTSARSSRDASDLYRAVWRWHFYAGLIAIPFLISLAVTGGLYLFKDEIDQWLNADIVRVEAQSSAAVSPQQQLDAAMAA HPGEAFRYVPPAASNLAAEVDITTADGKQAVYVDPYTGEVTGTIPYRGSVMWIVRTIHSLSYFGETASLIIEIVGGWSIL LVLTGIYLWWPRGRRGGVMTVRATPAKRLFWRDLHAVTGIFVGGFILFLAMTGMPWSTLWGSKVNELANGHNFGYPDGVR VNVPVSDERLAEREMTTWSLEQARLPESTPGREGAPGIGLNGAVKAFDALGLAPGYAVSLPSSPTGVYTGSIYPDDLSRQ RVVHLDRYSGEPLLDMSYADYGPLGKSLEWGINVHMGQQYGLANQLILALACAGIVLLCVSSGVMWWKRRPSGKLGIPPE PKDPRRLRGVLALLAIGGVIFPLVGASMIVMAVVDALVRRRGARRAATTA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48958; Mature: 48827
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTSARSSRDASDLYRAVWRWHFYAGLIAIPFLISLAVTGGLYLFKDEIDQWLNADIVR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCCCEEE VEAQSSAAVSPQQQLDAAMAAHPGEAFRYVPPAASNLAAEVDITTADGKQAVYVDPYTGE EECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCC VTGTIPYRGSVMWIVRTIHSLSYFGETASLIIEIVGGWSILLVLTGIYLWWPRGRRGGVM EEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEE TVRATPAKRLFWRDLHAVTGIFVGGFILFLAMTGMPWSTLWGSKVNELANGHNFGYPDGV EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCE RVNVPVSDERLAEREMTTWSLEQARLPESTPGREGAPGIGLNGAVKAFDALGLAPGYAVS EEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE LPSSPTGVYTGSIYPDDLSRQRVVHLDRYSGEPLLDMSYADYGPLGKSLEWGINVHMGQQ CCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEECCC YGLANQLILALACAGIVLLCVSSGVMWWKRRPSGKLGIPPEPKDPRRLRGVLALLAIGGV CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IFPLVGASMIVMAVVDALVRRRGARRAATTA HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure SRTSARSSRDASDLYRAVWRWHFYAGLIAIPFLISLAVTGGLYLFKDEIDQWLNADIVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHCCCCEEE VEAQSSAAVSPQQQLDAAMAAHPGEAFRYVPPAASNLAAEVDITTADGKQAVYVDPYTGE EECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCC VTGTIPYRGSVMWIVRTIHSLSYFGETASLIIEIVGGWSILLVLTGIYLWWPRGRRGGVM EEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEE TVRATPAKRLFWRDLHAVTGIFVGGFILFLAMTGMPWSTLWGSKVNELANGHNFGYPDGV EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCE RVNVPVSDERLAEREMTTWSLEQARLPESTPGREGAPGIGLNGAVKAFDALGLAPGYAVS EEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE LPSSPTGVYTGSIYPDDLSRQRVVHLDRYSGEPLLDMSYADYGPLGKSLEWGINVHMGQQ CCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEECCC YGLANQLILALACAGIVLLCVSSGVMWWKRRPSGKLGIPPEPKDPRRLRGVLALLAIGGV CCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IFPLVGASMIVMAVVDALVRRRGARRAATTA HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA