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The map label for this gene is ybhH [H]

Identifier: 92112298

GI number: 92112298

Start: 186583

End: 187767

Strand: Direct

Name: ybhH [H]

Synonym: Csal_0163

Alternate gene names: 92112298

Gene position: 186583-187767 (Clockwise)

Preceding gene: 92112296

Following gene: 92112299

Centisome position: 5.05

GC content: 61.27

Gene sequence:

>1185_bases
ATGAAAAGTGCCCTGACATGCTCATATCACGACTTTTCGACGCGATATGGCATGACGATGATGAACAGCATTCCCTGCAT
GATCATGCGCGGTGGTACCTCCAGAGGCCCTTTCTTGCGCATGAAGGACCTTCCCGATAACCAGGCGGCGCAAGCCGAGA
TCCTGATCAGCCTGATGGGGTCGGGCCATGCTCTGCAGGTCGATGGCATTGGAGGCGGCGACCCGCTGACCAGCAAGGTC
GCCATTGTGGAGCGTTCATCGCACCCCGAGGCGGATGTCGATTACCTGTTCGCGCAGGTCGATGTGCTCAATCGGCGTGT
CGACTTCAACCCGAACTGCGGCAACATGCTCTCGGCCGTCGGTCCGTATGCCCTCGAAACGGGACTGGTAGCGCTCCAGG
AGGGGATGACGACTGTTCGGGTGCGCAATCTCAACACCCAGCGGTTGATCGAGTGTCATGTGCCGACTCCGGGAGGGCAA
GTCGCTTACGAGGGCGATACGACGATCAGCGGCGTCCCCGGATGTGCCGCCGGCATCCAGCTCGGTTTCCTGGATATCGT
CGGCACCAAGACGGGGGCGTTGCTGCCGACCGGTAACGCCATCGACACGATAGATGGCCTCCAGGTCACCTGCCTCGACG
CTGCCACTCCCATCATGATGGTCAACGCGGCCGACCTGGGCCTCAGTGGCCAGGAGTCTCCCGCTGAACTGGATGCTCAT
TCTGCCATGCTCGAGCGGCTGGAGTCGGTTCGTCGCGAGGCGGGGCTGCGAATGGGGCTGGGGGATGTCAGCCAGAGCGT
CTTGCCCAAGCCGGTGCTGGTATCGGCACCGATCGACGACGACAGTACGTTGTGCACTCGCTATTTCGTGCCTCATCGCT
GCCACAAGGCCATTGCCGTCACTGGCGCCATTGCGGTGGCCACGGCCGTCAGTGTGCCGGGCACCGTGGCCAACCGCATC
GTGGTTGAGGCAGGGAAACTGGAGGTTGATGGTCAGCTGTCACAGGTCAGCCTGGAACACCCCTCCGGATTCATCGATCT
GGATGTCGAGCATCGCAACGGAAACCCCGTCGACATTGCCCGCGTTTCCCTCATCCGCACCGCCAGAAAGATCATGAGCG
GGACCCTTTTCTACTCGCTTCCTTCGGCTCCCGGTCAGGATATGCTGACATCAAGAGCCAGCTGA

Upstream 100 bases:

>100_bases
GTAGCATGTCGTTTTTCTTGCATGGGATGAAGTGTATTAATGACTTTAGCACATTAATGCATTTTTCGAATTGATCGACG
ATTCTATTTGCATTTGAGGC

Downstream 100 bases:

>100_bases
ATCCTTGCCTCTGCAGGGATGTCGGTCATCGACCATGACAACTACAACACGCCAGGAGTAACGCCATGCCAATCAAAAAG
ACTGCAACTGCTTGCCTTTC

Product: methylitaconate delta2-delta3-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKSALTCSYHDFSTRYGMTMMNSIPCMIMRGGTSRGPFLRMKDLPDNQAAQAEILISLMGSGHALQVDGIGGGDPLTSKV
AIVERSSHPEADVDYLFAQVDVLNRRVDFNPNCGNMLSAVGPYALETGLVALQEGMTTVRVRNLNTQRLIECHVPTPGGQ
VAYEGDTTISGVPGCAAGIQLGFLDIVGTKTGALLPTGNAIDTIDGLQVTCLDAATPIMMVNAADLGLSGQESPAELDAH
SAMLERLESVRREAGLRMGLGDVSQSVLPKPVLVSAPIDDDSTLCTRYFVPHRCHKAIAVTGAIAVATAVSVPGTVANRI
VVEAGKLEVDGQLSQVSLEHPSGFIDLDVEHRNGNPVDIARVSLIRTARKIMSGTLFYSLPSAPGQDMLTSRAS

Sequences:

>Translated_394_residues
MKSALTCSYHDFSTRYGMTMMNSIPCMIMRGGTSRGPFLRMKDLPDNQAAQAEILISLMGSGHALQVDGIGGGDPLTSKV
AIVERSSHPEADVDYLFAQVDVLNRRVDFNPNCGNMLSAVGPYALETGLVALQEGMTTVRVRNLNTQRLIECHVPTPGGQ
VAYEGDTTISGVPGCAAGIQLGFLDIVGTKTGALLPTGNAIDTIDGLQVTCLDAATPIMMVNAADLGLSGQESPAELDAH
SAMLERLESVRREAGLRMGLGDVSQSVLPKPVLVSAPIDDDSTLCTRYFVPHRCHKAIAVTGAIAVATAVSVPGTVANRI
VVEAGKLEVDGQLSQVSLEHPSGFIDLDVEHRNGNPVDIARVSLIRTARKIMSGTLFYSLPSAPGQDMLTSRAS
>Mature_394_residues
MKSALTCSYHDFSTRYGMTMMNSIPCMIMRGGTSRGPFLRMKDLPDNQAAQAEILISLMGSGHALQVDGIGGGDPLTSKV
AIVERSSHPEADVDYLFAQVDVLNRRVDFNPNCGNMLSAVGPYALETGLVALQEGMTTVRVRNLNTQRLIECHVPTPGGQ
VAYEGDTTISGVPGCAAGIQLGFLDIVGTKTGALLPTGNAIDTIDGLQVTCLDAATPIMMVNAADLGLSGQESPAELDAH
SAMLERLESVRREAGLRMGLGDVSQSVLPKPVLVSAPIDDDSTLCTRYFVPHRCHKAIAVTGAIAVATAVSVPGTVANRI
VVEAGKLEVDGQLSQVSLEHPSGFIDLDVEHRNGNPVDIARVSLIRTARKIMSGTLFYSLPSAPGQDMLTSRAS

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yraM [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=357, Percent_Identity=52.1008403361345, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 41613; Mature: 41613

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSALTCSYHDFSTRYGMTMMNSIPCMIMRGGTSRGPFLRMKDLPDNQAAQAEILISLMG
CCCCEEEECCCCCHHCCHHHHCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHEEEEECC
SGHALQVDGIGGGDPLTSKVAIVERSSHPEADVDYLFAQVDVLNRRVDFNPNCGNMLSAV
CCCEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHC
GPYALETGLVALQEGMTTVRVRNLNTQRLIECHVPTPGGQVAYEGDTTISGVPGCAAGIQ
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCEECCCCCHHHHCE
LGFLDIVGTKTGALLPTGNAIDTIDGLQVTCLDAATPIMMVNAADLGLSGQESPAELDAH
EEEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH
SAMLERLESVRREAGLRMGLGDVSQSVLPKPVLVSAPIDDDSTLCTRYFVPHRCHKAIAV
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHH
TGAIAVATAVSVPGTVANRIVVEAGKLEVDGQLSQVSLEHPSGFIDLDVEHRNGNPVDIA
HHHHHHHHHHCCCCHHHCEEEEEECCEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHH
RVSLIRTARKIMSGTLFYSLPSAPGQDMLTSRAS
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCC
>Mature Secondary Structure
MKSALTCSYHDFSTRYGMTMMNSIPCMIMRGGTSRGPFLRMKDLPDNQAAQAEILISLMG
CCCCEEEECCCCCHHCCHHHHCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHEEEEECC
SGHALQVDGIGGGDPLTSKVAIVERSSHPEADVDYLFAQVDVLNRRVDFNPNCGNMLSAV
CCCEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHC
GPYALETGLVALQEGMTTVRVRNLNTQRLIECHVPTPGGQVAYEGDTTISGVPGCAAGIQ
CCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCEECCCCCHHHHCE
LGFLDIVGTKTGALLPTGNAIDTIDGLQVTCLDAATPIMMVNAADLGLSGQESPAELDAH
EEEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH
SAMLERLESVRREAGLRMGLGDVSQSVLPKPVLVSAPIDDDSTLCTRYFVPHRCHKAIAV
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHH
TGAIAVATAVSVPGTVANRIVVEAGKLEVDGQLSQVSLEHPSGFIDLDVEHRNGNPVDIA
HHHHHHHHHHCCCCHHHCEEEEEECCEEECCCEEEEEECCCCCEEEEEEECCCCCCCHHH
RVSLIRTARKIMSGTLFYSLPSAPGQDMLTSRAS
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]