Click here to switch to the map view.

The map label for this gene is 92112253

Identifier: 92112253

GI number: 92112253

Start: 140744

End: 141112

Strand: Direct

Name: 92112253

Synonym: Csal_0118

Alternate gene names: NA

Gene position: 140744-141112 (Clockwise)

Preceding gene: 92112252

Following gene: 92112254

Centisome position: 3.81

GC content: 70.46

Gene sequence:

>369_bases
ATGCGTGTCTCCCTGCGTCATCTTCGCAGGCTTTGCCTAGCGCTGGCCGTCGTCAGCGCCGCCGTGATCGCCTGGGGCAG
CCTGACCCCCGGTGCGGACATGCCTCAGGAGCTGCCCTGGGACAAGTTCAACCATTTCATCGCCTATGCGGGGTTGGCGG
CGCTGCTGCGCCTGGGCGGTCTGCGCGCGGTGACGGCGCTGGGCCTGGCCATCGGTTACGGCCTTCTCGTCGAAGGCTTG
CAGCTGGGCGTGCCGGGGCGCAGCGGTGCCGACGGCGCCGATGCGCTGGCCAATGCGCTGGGCGCGCTCGCCGCCGTGGC
AGCCTGCCGCTGGCTGTTGCCGCGGCGCTTTCTTGTTGCGCACGGATAG

Upstream 100 bases:

>100_bases
GGCGCGCCTGGATGCGTCGGTCTGCCGACGGCTGGCGTTGCCTCGTGCCCTGGCGAGCGACGACGCGGCCCCGGTCCATT
CATCATCAGGAGCGTGAGTC

Downstream 100 bases:

>100_bases
GCTATGTTGCGCGGTTTTCCGGTGCGTTCGCGGCAGGCCGTGAACGCCGCGACTCCGGCCCCTCGAGGGCTTTCACTAGG
GCGATGACGAGGATTCCCAT

Product: VanZ like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRVSLRHLRRLCLALAVVSAAVIAWGSLTPGADMPQELPWDKFNHFIAYAGLAALLRLGGLRAVTALGLAIGYGLLVEGL
QLGVPGRSGADGADALANALGALAAVAACRWLLPRRFLVAHG

Sequences:

>Translated_122_residues
MRVSLRHLRRLCLALAVVSAAVIAWGSLTPGADMPQELPWDKFNHFIAYAGLAALLRLGGLRAVTALGLAIGYGLLVEGL
QLGVPGRSGADGADALANALGALAAVAACRWLLPRRFLVAHG
>Mature_122_residues
MRVSLRHLRRLCLALAVVSAAVIAWGSLTPGADMPQELPWDKFNHFIAYAGLAALLRLGGLRAVTALGLAIGYGLLVEGL
QLGVPGRSGADGADALANALGALAAVAACRWLLPRRFLVAHG

Specific function: Unknown

COG id: COG5652

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12663; Mature: 12663

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSLRHLRRLCLALAVVSAAVIAWGSLTPGADMPQELPWDKFNHFIAYAGLAALLRLGG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LRAVTALGLAIGYGLLVEGLQLGVPGRSGADGADALANALGALAAVAACRWLLPRRFLVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HG
CC
>Mature Secondary Structure
MRVSLRHLRRLCLALAVVSAAVIAWGSLTPGADMPQELPWDKFNHFIAYAGLAALLRLGG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LRAVTALGLAIGYGLLVEGLQLGVPGRSGADGADALANALGALAAVAACRWLLPRRFLVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA