Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is yrbG [H]
Identifier: 92112247
GI number: 92112247
Start: 135060
End: 135560
Strand: Direct
Name: yrbG [H]
Synonym: Csal_0112
Alternate gene names: 92112247
Gene position: 135060-135560 (Clockwise)
Preceding gene: 92112244
Following gene: 92112251
Centisome position: 3.65
GC content: 64.67
Gene sequence:
>501_bases ATGCATCCGGTCGTGCACACGCTGGTCATCGGCGTCATCAGCTATCTGGTCCTGATCGTCATCATCCGCCTGTCCGGCAA GCGCACGCTGTCGAAGTGGAACGCCTTCGATTTCGTGGTCACCATCGCGCTGGGGTCGACGTTGTCGACGGCGCTGGTCT CGACGCAGGTCTCGCTGGCGCAGAGCATCACGGCGTTCGTGCTGATCGTCGCGCTGCAGTTCGCCATCACCTTCACATCG GTGCGCTCTCGGCGGGTCAAGAATCTGGTCAAGTCGCAGCCGACGTTACTGCTCTTCCAGGGACGGTTCCGTGCCGAGAC GATGGCTCAGGAGCGTGTCGTCGACGCGGAGGTGCGCGCGGCGATCCGCGAGAACGGCATCGCCGACGTGGAGCGTGTGT ATGCGGTGGTGCTGGAGACCGACGGTACCTTCAGCGTGATTCCCGAGGCCGGCGACAGCGATTCGGCCTTGCAGGGCGTG GCGGGGCTGCCGACGTCGTGA
Upstream 100 bases:
>100_bases TCGCCGCCGAATGCGGCGCGCAAGGCGATATGAGTGGCCGGGCGTGCATCAGGGGCCTACGCTGACGGGCGCATCCTTCA TCCCTGGTCTGGAGTCTCCC
Downstream 100 bases:
>100_bases CGTCGCCGACAGCCCTTGCCGTCCAGGCGCGCTCAGTTTGCTTCGTGCGCCGAGGAGGGCGTGGTGGCGGCCTCCAGGAA ACCGCCCGACTGGCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MHPVVHTLVIGVISYLVLIVIIRLSGKRTLSKWNAFDFVVTIALGSTLSTALVSTQVSLAQSITAFVLIVALQFAITFTS VRSRRVKNLVKSQPTLLLFQGRFRAETMAQERVVDAEVRAAIRENGIADVERVYAVVLETDGTFSVIPEAGDSDSALQGV AGLPTS
Sequences:
>Translated_166_residues MHPVVHTLVIGVISYLVLIVIIRLSGKRTLSKWNAFDFVVTIALGSTLSTALVSTQVSLAQSITAFVLIVALQFAITFTS VRSRRVKNLVKSQPTLLLFQGRFRAETMAQERVVDAEVRAAIRENGIADVERVYAVVLETDGTFSVIPEAGDSDSALQGV AGLPTS >Mature_166_residues MHPVVHTLVIGVISYLVLIVIIRLSGKRTLSKWNAFDFVVTIALGSTLSTALVSTQVSLAQSITAFVLIVALQFAITFTS VRSRRVKNLVKSQPTLLLFQGRFRAETMAQERVVDAEVRAAIRENGIADVERVYAVVLETDGTFSVIPEAGDSDSALQGV AGLPTS
Specific function: Unknown
COG id: COG2323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0702 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007353 - InterPro: IPR023090 [H]
Pfam domain/function: PF04239 DUF421 [H]
EC number: NA
Molecular weight: Translated: 17915; Mature: 17915
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVVHTLVIGVISYLVLIVIIRLSGKRTLSKWNAFDFVVTIALGSTLSTALVSTQVSLA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH QSITAFVLIVALQFAITFTSVRSRRVKNLVKSQPTLLLFQGRFRAETMAQERVVDAEVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH AIRENGIADVERVYAVVLETDGTFSVIPEAGDSDSALQGVAGLPTS HHHHCCCHHHHHHHHHEEECCCCEEECCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MHPVVHTLVIGVISYLVLIVIIRLSGKRTLSKWNAFDFVVTIALGSTLSTALVSTQVSLA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH QSITAFVLIVALQFAITFTSVRSRRVKNLVKSQPTLLLFQGRFRAETMAQERVVDAEVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH AIRENGIADVERVYAVVLETDGTFSVIPEAGDSDSALQGVAGLPTS HHHHCCCHHHHHHHHHEEECCCCEEECCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]