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The map label for this gene is acoR [H]

Identifier: 91790350

GI number: 91790350

Start: 4775295

End: 4777196

Strand: Reverse

Name: acoR [H]

Synonym: Bpro_4518

Alternate gene names: 91790350

Gene position: 4777196-4775295 (Counterclockwise)

Preceding gene: 91790355

Following gene: 91790346

Centisome position: 91.86

GC content: 66.88

Gene sequence:

>1902_bases
GTGCAACAAGCGATTACTTTTGAGCCGAACCTCTACGCTCCCGAACGCATCTGGCAAGCGCGTCGGGCCTTCTTTGACGA
CGGCAGCGCGCCTGCGGGCCTGATTGACGACCCAGTGCTGCGTTCATGGCAACGCTGCCGGGGTCAGGGTCGCGGCGCCT
CGGAACAGGTGGAATTCGATCCCGTGGACCGTCTCGCACTGGCCCGTTTGCTGGAGGCCCAGCGCACATTGCTGGAGGCG
GCACGCCCCGAGCTGGATGCGCTCGCCCGCGCGGTGTCGGACGCCGGCTATGCCGTGCTGCTGACCGATGTCCAGGGACG
AGCCTTGGCGGTCGAGGGTTGCACCGACCGCCGTAGCGAGCCGCTACGGCAAGCCTTTCGTCCCGGGGTAGACCTGTCTG
AGGCGGTGATTGGCACCAACGCGATGTCGTCGGCGATGACCGAGCAGCGGGTGGTCCGCGTGCTCGGGCCCGAGCATTTT
TTTGCCGACAACCAGATCTTTCACTGTTGCGCTGCACCCGTGTTTGACCCGCAGGGGCGCGTGGTCGGCGCGGTTGATAT
CTCGCGCGACATGCCGGGCCTGGCGGCCGGTGCCGTGGCGTTGACCCAGCGCTGCGCCCGCCGCATCGAGCGCAAGCTTT
TCGAGGCGCTCCCGGCATTCGTGCGGCTGCGGCTGGAGACGCAGGATGCGAGCGATGAAGCCTGGCTCGCCTTCAACCGC
GATGGCGGCCTGCTGGCGGCCAACATCGCCGCGCGCCATCTGATCGATGTCCCTTTCGTTCCGCAGGGGCTGGGCTTCAG
CGACCTGTTTGACGGCCGTTTCGATACGCTCGCCGCTGCGGCAAGCCAGGCGAGCGGCGAACTGAGCCTGCGTCTGCGTG
GCGGGGTGCAGCTGCGCGCCCGCGCCTCGGGCGTGCCGCCCATGGCGCGATCCGTTGCCACGCCCAACCGTTCAGCGCCG
CCGCGCACCGCGCCGAGGCCTGAGTTCGGCGATGTGTCCTTTGCCGCCGACTTTGAACGCGCGCTGCGCGCCTTCAATGC
CGGTTTGCCGGTTTTGGTAACGGGCGAAACCGGTGCTGGCAAGGAAGTCGCAGCCCGCGCCCTGCACGAAGTGAGTCATC
GCCACGACGGCCCGTTAATAGCGATCAACTGCGGCGCCATCGCTCCCCAGTTGATGGCCGCCGAGCTGTTCGGCCATGTC
GAAGGCGCCTTCACTGGCGCCCGGCGTGGCGGCAGCGCCGGCAAAATCGAAGCGGCCCAAGGCGGCACCTTGCTGCTTGA
CGAAATCGGCGACATGCCGCTTGAGTTGCAGGTCGGCCTGCTGCGCATGCTCGACAGTGGCGAAGTCCTGCGCGTCGGTG
CGACCCGGGCGGTGCGGGTGGACGTGCGCTTCGTCTGCGCGACCCACCGCGATCTGCGCGCGCTGGTGGCTTCGGGGCTC
TTTCGCGAGGATCTCTATTACCGCATCAGTGGTTTTCAGTTGCAGATACCACCGCTACGCATGAGAAGTGATTTCAACGC
AGTCCTTGACGCCTTGCTGGCGGAGCAGGGCTGCGCGCCGCGGCTGCTCGACGCCGGGCTGCGCCGGGCGCTAAAAAGCA
GACGCTGGCCGGGCAACGTGCGCCAATTGCGCCATGCGCTTCGACTGGCACTGGCGCTGCTGGAAGCCGATGAAGCGCTC
ACCCTGAGTCATTTTCCCGACCATGAACCCGACCATGAATCCAGCCTGGGAGTGCCTTCTGCTCGTCCGCGCACCGGTGC
ACCCGACGACGGGTTGAGTTGGCGGCAGACGCAACAGCAGGCCATCGATGCGGCGCTGCGGCAAACCGGCGGCAACGTCA
CCGCCGCGGCTGCCTTGCTTAATATCGGTCGCGCAACGCTCTACCGCAAGCTGGCGAAATGA

Upstream 100 bases:

>100_bases
CATGTCGACCCACCGGGATACCGCCTCAAAACGAGACGAGGGGTCTCAAATCGAGACGACCAGAGAAACGCATACGTGCT
GGCAGCCCTGGAGACAACCT

Downstream 100 bases:

>100_bases
TCAACGGCCAACTCGCCCCAACTCGCCGTTAGCTATCGCTATCGGGAAGATGGCGTCGTCAAGCCGAAGCCGTACCCGCC
TTGACTTTCAACCGCCAGGC

Product: sigma-54 dependent trancsriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MQQAITFEPNLYAPERIWQARRAFFDDGSAPAGLIDDPVLRSWQRCRGQGRGASEQVEFDPVDRLALARLLEAQRTLLEA
ARPELDALARAVSDAGYAVLLTDVQGRALAVEGCTDRRSEPLRQAFRPGVDLSEAVIGTNAMSSAMTEQRVVRVLGPEHF
FADNQIFHCCAAPVFDPQGRVVGAVDISRDMPGLAAGAVALTQRCARRIERKLFEALPAFVRLRLETQDASDEAWLAFNR
DGGLLAANIAARHLIDVPFVPQGLGFSDLFDGRFDTLAAAASQASGELSLRLRGGVQLRARASGVPPMARSVATPNRSAP
PRTAPRPEFGDVSFAADFERALRAFNAGLPVLVTGETGAGKEVAARALHEVSHRHDGPLIAINCGAIAPQLMAAELFGHV
EGAFTGARRGGSAGKIEAAQGGTLLLDEIGDMPLELQVGLLRMLDSGEVLRVGATRAVRVDVRFVCATHRDLRALVASGL
FREDLYYRISGFQLQIPPLRMRSDFNAVLDALLAEQGCAPRLLDAGLRRALKSRRWPGNVRQLRHALRLALALLEADEAL
TLSHFPDHEPDHESSLGVPSARPRTGAPDDGLSWRQTQQQAIDAALRQTGGNVTAAAALLNIGRATLYRKLAK

Sequences:

>Translated_633_residues
MQQAITFEPNLYAPERIWQARRAFFDDGSAPAGLIDDPVLRSWQRCRGQGRGASEQVEFDPVDRLALARLLEAQRTLLEA
ARPELDALARAVSDAGYAVLLTDVQGRALAVEGCTDRRSEPLRQAFRPGVDLSEAVIGTNAMSSAMTEQRVVRVLGPEHF
FADNQIFHCCAAPVFDPQGRVVGAVDISRDMPGLAAGAVALTQRCARRIERKLFEALPAFVRLRLETQDASDEAWLAFNR
DGGLLAANIAARHLIDVPFVPQGLGFSDLFDGRFDTLAAAASQASGELSLRLRGGVQLRARASGVPPMARSVATPNRSAP
PRTAPRPEFGDVSFAADFERALRAFNAGLPVLVTGETGAGKEVAARALHEVSHRHDGPLIAINCGAIAPQLMAAELFGHV
EGAFTGARRGGSAGKIEAAQGGTLLLDEIGDMPLELQVGLLRMLDSGEVLRVGATRAVRVDVRFVCATHRDLRALVASGL
FREDLYYRISGFQLQIPPLRMRSDFNAVLDALLAEQGCAPRLLDAGLRRALKSRRWPGNVRQLRHALRLALALLEADEAL
TLSHFPDHEPDHESSLGVPSARPRTGAPDDGLSWRQTQQQAIDAALRQTGGNVTAAAALLNIGRATLYRKLAK
>Mature_633_residues
MQQAITFEPNLYAPERIWQARRAFFDDGSAPAGLIDDPVLRSWQRCRGQGRGASEQVEFDPVDRLALARLLEAQRTLLEA
ARPELDALARAVSDAGYAVLLTDVQGRALAVEGCTDRRSEPLRQAFRPGVDLSEAVIGTNAMSSAMTEQRVVRVLGPEHF
FADNQIFHCCAAPVFDPQGRVVGAVDISRDMPGLAAGAVALTQRCARRIERKLFEALPAFVRLRLETQDASDEAWLAFNR
DGGLLAANIAARHLIDVPFVPQGLGFSDLFDGRFDTLAAAASQASGELSLRLRGGVQLRARASGVPPMARSVATPNRSAP
PRTAPRPEFGDVSFAADFERALRAFNAGLPVLVTGETGAGKEVAARALHEVSHRHDGPLIAINCGAIAPQLMAAELFGHV
EGAFTGARRGGSAGKIEAAQGGTLLLDEIGDMPLELQVGLLRMLDSGEVLRVGATRAVRVDVRFVCATHRDLRALVASGL
FREDLYYRISGFQLQIPPLRMRSDFNAVLDALLAEQGCAPRLLDAGLRRALKSRRWPGNVRQLRHALRLALALLEADEAL
TLSHFPDHEPDHESSLGVPSARPRTGAPDDGLSWRQTQQQAIDAALRQTGGNVTAAAALLNIGRATLYRKLAK

Specific function: Required for sigma-54-dependent transcription of acoXABC [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1786524, Length=304, Percent_Identity=45.3947368421053, Blast_Score=203, Evalue=3e-53,
Organism=Escherichia coli, GI1789233, Length=297, Percent_Identity=39.0572390572391, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI87082152, Length=297, Percent_Identity=42.4242424242424, Blast_Score=194, Evalue=2e-50,
Organism=Escherichia coli, GI1790437, Length=293, Percent_Identity=39.2491467576792, Blast_Score=187, Evalue=2e-48,
Organism=Escherichia coli, GI1790299, Length=312, Percent_Identity=39.4230769230769, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI87082117, Length=300, Percent_Identity=41, Blast_Score=182, Evalue=8e-47,
Organism=Escherichia coli, GI1788905, Length=304, Percent_Identity=38.1578947368421, Blast_Score=179, Evalue=5e-46,
Organism=Escherichia coli, GI1788550, Length=288, Percent_Identity=37.8472222222222, Blast_Score=178, Evalue=1e-45,
Organism=Escherichia coli, GI87081858, Length=645, Percent_Identity=27.2868217054264, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1789087, Length=293, Percent_Identity=38.9078498293515, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI87081872, Length=206, Percent_Identity=43.2038834951456, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI1787583, Length=214, Percent_Identity=42.9906542056075, Blast_Score=162, Evalue=9e-41,
Organism=Escherichia coli, GI1789828, Length=216, Percent_Identity=36.1111111111111, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 68327; Mature: 68327

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQAITFEPNLYAPERIWQARRAFFDDGSAPAGLIDDPVLRSWQRCRGQGRGASEQVEFD
CCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PVDRLALARLLEAQRTLLEAARPELDALARAVSDAGYAVLLTDVQGRALAVEGCTDRRSE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHH
PLRQAFRPGVDLSEAVIGTNAMSSAMTEQRVVRVLGPEHFFADNQIFHCCAAPVFDPQGR
HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCC
VVGAVDISRDMPGLAAGAVALTQRCARRIERKLFEALPAFVRLRLETQDASDEAWLAFNR
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECC
DGGLLAANIAARHLIDVPFVPQGLGFSDLFDGRFDTLAAAASQASGELSLRLRGGVQLRA
CCCEEEHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEEE
RASGVPPMARSVATPNRSAPPRTAPRPEFGDVSFAADFERALRAFNAGLPVLVTGETGAG
ECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC
KEVAARALHEVSHRHDGPLIAINCGAIAPQLMAAELFGHVEGAFTGARRGGSAGKIEAAQ
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
GGTLLLDEIGDMPLELQVGLLRMLDSGEVLRVGATRAVRVDVRFVCATHRDLRALVASGL
CCEEEHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCHHHHHHHHHHHH
FREDLYYRISGFQLQIPPLRMRSDFNAVLDALLAEQGCAPRLLDAGLRRALKSRRWPGNV
HHHHHHEEEECEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
RQLRHALRLALALLEADEALTLSHFPDHEPDHESSLGVPSARPRTGAPDDGLSWRQTQQQ
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AIDAALRQTGGNVTAAAALLNIGRATLYRKLAK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQAITFEPNLYAPERIWQARRAFFDDGSAPAGLIDDPVLRSWQRCRGQGRGASEQVEFD
CCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PVDRLALARLLEAQRTLLEAARPELDALARAVSDAGYAVLLTDVQGRALAVEGCTDRRSE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCHH
PLRQAFRPGVDLSEAVIGTNAMSSAMTEQRVVRVLGPEHFFADNQIFHCCAAPVFDPQGR
HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCC
VVGAVDISRDMPGLAAGAVALTQRCARRIERKLFEALPAFVRLRLETQDASDEAWLAFNR
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECC
DGGLLAANIAARHLIDVPFVPQGLGFSDLFDGRFDTLAAAASQASGELSLRLRGGVQLRA
CCCEEEHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEEE
RASGVPPMARSVATPNRSAPPRTAPRPEFGDVSFAADFERALRAFNAGLPVLVTGETGAG
ECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC
KEVAARALHEVSHRHDGPLIAINCGAIAPQLMAAELFGHVEGAFTGARRGGSAGKIEAAQ
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
GGTLLLDEIGDMPLELQVGLLRMLDSGEVLRVGATRAVRVDVRFVCATHRDLRALVASGL
CCEEEHHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCHHHHHHHHHHHH
FREDLYYRISGFQLQIPPLRMRSDFNAVLDALLAEQGCAPRLLDAGLRRALKSRRWPGNV
HHHHHHEEEECEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
RQLRHALRLALALLEADEALTLSHFPDHEPDHESSLGVPSARPRTGAPDDGLSWRQTQQQ
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AIDAALRQTGGNVTAAAALLNIGRATLYRKLAK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1378052 [H]