Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790345

Identifier: 91790345

GI number: 91790345

Start: 4767864

End: 4768880

Strand: Reverse

Name: 91790345

Synonym: Bpro_4513

Alternate gene names: NA

Gene position: 4768880-4767864 (Counterclockwise)

Preceding gene: 91790346

Following gene: 91790344

Centisome position: 91.7

GC content: 63.91

Gene sequence:

>1017_bases
TTGAACTTCAAACGACGCACCCTGATGACCACGACCCTGATGACGGCGGCACTGTCTGGCCTGGCCAGCCTGAACGGCGC
GGCCACCGCCCAAACCGCCGCTTCGACAAGCTCAGGACAGGCCTGGCCCGACAAGCCGGTGCGCATTGTGGTGCCTTATG
CACCGGGCGGAACGACGGACTACGCCGCCCGTCAAATAGCGCAAAAGCTGACGGAGCAGACCCGGCAGTCCTTCTATGTC
GAGAACAAGGCTGGTGCCAGCGGCACCATAGGCACCGACCTGGTGGCCAAGGCGGCGCCCGACGGCTACACGCTGCTGAC
CAACGACACCACGTACGCGATGCTGCCTTCGCTGTTTGCCAAACTGCCTTGGGATCACGCCAACGGCCTGGTGCCCGTGA
CCACCATCGCGCAGACGCCGGTAGTGCTGGTGGTGGGCAACGCCTCGCCTTTTAAAACGCTGGCCGAACTGGTTGCCCAT
GCACAAAAAAATCCGGGAAAGCTCAACTTTGGCTCGGGCGGCGCGGGCAGCTCCACCCACCTTTCGGCGGAACTGCTCAA
GAAGGAAGGCAGGCTTTTCATCACACACATCCCTTACAAGGGGGCCGGCGACGCTATGCTGGGCGTGATGTCCGGCCAGG
TGGACCTGCTTATCACCGCCAGCCCCACGGCGATTCCGCAGATCAGGGGTGGCAAGGTGCGCGCACTGGCCGTCACCGGC
GACAAACGCCTGCCCAGCCTGCCCGATGTGCCGACCTTCAAGGAAGCGGGCTTGCGCGGCTACACGGTCACCAACTGGTT
TGGCCTGGCAGCCCCGAGGGGAACGCCTCCCGCCATCGTGGACAAGCTGCAGGCCGAGATAAAAAAGGCCTTGGCCGATC
CGGCCTTGCGTGAGCGCTTTGCCCAGCAGGGCGCACAGCCTGGCGGCATGAGCCCTGCCGATTTTGCGGCCTTCATCAAG
CAGGAAACCGTCATCTGGAGTGCCGTCGCGAAGCTGGCGAGCGTCAAGCCCGAGTAA

Upstream 100 bases:

>100_bases
CGCCATCCAGGCTTTCCAGAATTCCGCCGAAAGCATCGCTCAAAGCAACCGTTAAACCCCAGACCCCCACCCCCAAGAAA
CCACACCCGGAGACACACCC

Downstream 100 bases:

>100_bases
GCTGGCACCGCAGCAGGCACTCAACACGGCACCTTCATCATGTGGAACTTGTCCTTCACGCCTCCCGAACTCATTGAAGC
CCGCGTGCTGACGCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNFKRRTLMTTTLMTAALSGLASLNGAATAQTAASTSSGQAWPDKPVRIVVPYAPGGTTDYAARQIAQKLTEQTRQSFYV
ENKAGASGTIGTDLVAKAAPDGYTLLTNDTTYAMLPSLFAKLPWDHANGLVPVTTIAQTPVVLVVGNASPFKTLAELVAH
AQKNPGKLNFGSGGAGSSTHLSAELLKKEGRLFITHIPYKGAGDAMLGVMSGQVDLLITASPTAIPQIRGGKVRALAVTG
DKRLPSLPDVPTFKEAGLRGYTVTNWFGLAAPRGTPPAIVDKLQAEIKKALADPALRERFAQQGAQPGGMSPADFAAFIK
QETVIWSAVAKLASVKPE

Sequences:

>Translated_338_residues
MNFKRRTLMTTTLMTAALSGLASLNGAATAQTAASTSSGQAWPDKPVRIVVPYAPGGTTDYAARQIAQKLTEQTRQSFYV
ENKAGASGTIGTDLVAKAAPDGYTLLTNDTTYAMLPSLFAKLPWDHANGLVPVTTIAQTPVVLVVGNASPFKTLAELVAH
AQKNPGKLNFGSGGAGSSTHLSAELLKKEGRLFITHIPYKGAGDAMLGVMSGQVDLLITASPTAIPQIRGGKVRALAVTG
DKRLPSLPDVPTFKEAGLRGYTVTNWFGLAAPRGTPPAIVDKLQAEIKKALADPALRERFAQQGAQPGGMSPADFAAFIK
QETVIWSAVAKLASVKPE
>Mature_338_residues
MNFKRRTLMTTTLMTAALSGLASLNGAATAQTAASTSSGQAWPDKPVRIVVPYAPGGTTDYAARQIAQKLTEQTRQSFYV
ENKAGASGTIGTDLVAKAAPDGYTLLTNDTTYAMLPSLFAKLPWDHANGLVPVTTIAQTPVVLVVGNASPFKTLAELVAH
AQKNPGKLNFGSGGAGSSTHLSAELLKKEGRLFITHIPYKGAGDAMLGVMSGQVDLLITASPTAIPQIRGGKVRALAVTG
DKRLPSLPDVPTFKEAGLRGYTVTNWFGLAAPRGTPPAIVDKLQAEIKKALADPALRERFAQQGAQPGGMSPADFAAFIK
QETVIWSAVAKLASVKPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35379; Mature: 35379

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKRRTLMTTTLMTAALSGLASLNGAATAQTAASTSSGQAWPDKPVRIVVPYAPGGTTD
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHH
YAARQIAQKLTEQTRQSFYVENKAGASGTIGTDLVAKAAPDGYTLLTNDTTYAMLPSLFA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHH
KLPWDHANGLVPVTTIAQTPVVLVVGNASPFKTLAELVAHAQKNPGKLNFGSGGAGSSTH
HCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH
LSAELLKKEGRLFITHIPYKGAGDAMLGVMSGQVDLLITASPTAIPQIRGGKVRALAVTG
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEEC
DKRLPSLPDVPTFKEAGLRGYTVTNWFGLAAPRGTPPAIVDKLQAEIKKALADPALRERF
CCCCCCCCCCCCHHHCCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
AQQGAQPGGMSPADFAAFIKQETVIWSAVAKLASVKPE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFKRRTLMTTTLMTAALSGLASLNGAATAQTAASTSSGQAWPDKPVRIVVPYAPGGTTD
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHH
YAARQIAQKLTEQTRQSFYVENKAGASGTIGTDLVAKAAPDGYTLLTNDTTYAMLPSLFA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHH
KLPWDHANGLVPVTTIAQTPVVLVVGNASPFKTLAELVAHAQKNPGKLNFGSGGAGSSTH
HCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH
LSAELLKKEGRLFITHIPYKGAGDAMLGVMSGQVDLLITASPTAIPQIRGGKVRALAVTG
HHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEEEEEC
DKRLPSLPDVPTFKEAGLRGYTVTNWFGLAAPRGTPPAIVDKLQAEIKKALADPALRERF
CCCCCCCCCCCCHHHCCCCCEEEECEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
AQQGAQPGGMSPADFAAFIKQETVIWSAVAKLASVKPE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]