Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is drp35 [H]
Identifier: 91790344
GI number: 91790344
Start: 4766907
End: 4767824
Strand: Reverse
Name: drp35 [H]
Synonym: Bpro_4512
Alternate gene names: 91790344
Gene position: 4767824-4766907 (Counterclockwise)
Preceding gene: 91790345
Following gene: 91790343
Centisome position: 91.68
GC content: 65.36
Gene sequence:
>918_bases ATGTGGAACTTGTCCTTCACGCCTCCCGAACTCATTGAAGCCCGCGTGCTGACGCGCCTGCCCGACGTGCTGCGCCGGCC GCAACGCAGCGACTGGTCCGATGCCAACAAGCCCGGCCACATCGTTGACTGCTTTCTCGAAGGCCCGTCCTTCGATCGCG CCGGCAACCTGTATGTGACCGACATTCCGCATGGCCGCATCTTTCGTATCGATCCCGCGCTGGAGTGGCAGTTGGTCGCC GAGTACGACGGTTGGCCCAATGGCACCGCGCTGCATGCAGACGGCTCGCTGTGGATTGCCGATTACCGCTGCGGCCTGCT GCGGCTGGATCCGTCCACCGGGCAGGTCAGCACCGTGCTGGGCCACCGCAACAGCGAGTCCTTCAAGGGCGTGAATGATC TGACCTTCGACGCGCAGGGTCACTGCTACTTCACCGATCAGGGGCAGAGCGGACTGCATGACCCCACTGGGCGCGTCTAC CGGCTGCGCGACAACGGCCAGCTCGACCTGCTGTTGAACAATGCGCCCAGCCCCAACGGAATTGCCTTGAGCCCTGATGG CCGGGTCTTGTTTGTCGCCGTGACACGCGGCAACGCGGTGTGGCGCGCCCCGCTGCTGCCCGACGGTTCCCTGTCGAAAA TGGGGGCGTTCCAGACTTTCTTTGGCACCAGCGGTCCGGACGGGATGGCGGTCGATGTCGAGGGACGGCTGGTCGTGGCG CATGCCAGCCTGGGCGGCGCCTTTGTGCTTAACGCCCGCGGCGAGGTCACCCATTTCGTGCGCAGCCCGACCGGCAGCAC GGTGACCAATCTGGCCTATCGCCCCGGGACCCACCAGATCGTGATGACCGAGTCGGCCACCGGCACGCTGCTGATGGCGG ATTTGCCGGCGTCGGGAGCGCCTTTGTATTCAGGGTGA
Upstream 100 bases:
>100_bases CAAGCAGGAAACCGTCATCTGGAGTGCCGTCGCGAAGCTGGCGAGCGTCAAGCCCGAGTAAGCTGGCACCGCAGCAGGCA CTCAACACGGCACCTTCATC
Downstream 100 bases:
>100_bases AGCCAAAAGCAAAAATCCCCGCCACAACCTGGGCTGTGGCGGGGATGTGCAGTCGGGTCATCTGCGCGAAGACCGCACTG TCCATGGCCCGATAGCTTCG
Product: gluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MWNLSFTPPELIEARVLTRLPDVLRRPQRSDWSDANKPGHIVDCFLEGPSFDRAGNLYVTDIPHGRIFRIDPALEWQLVA EYDGWPNGTALHADGSLWIADYRCGLLRLDPSTGQVSTVLGHRNSESFKGVNDLTFDAQGHCYFTDQGQSGLHDPTGRVY RLRDNGQLDLLLNNAPSPNGIALSPDGRVLFVAVTRGNAVWRAPLLPDGSLSKMGAFQTFFGTSGPDGMAVDVEGRLVVA HASLGGAFVLNARGEVTHFVRSPTGSTVTNLAYRPGTHQIVMTESATGTLLMADLPASGAPLYSG
Sequences:
>Translated_305_residues MWNLSFTPPELIEARVLTRLPDVLRRPQRSDWSDANKPGHIVDCFLEGPSFDRAGNLYVTDIPHGRIFRIDPALEWQLVA EYDGWPNGTALHADGSLWIADYRCGLLRLDPSTGQVSTVLGHRNSESFKGVNDLTFDAQGHCYFTDQGQSGLHDPTGRVY RLRDNGQLDLLLNNAPSPNGIALSPDGRVLFVAVTRGNAVWRAPLLPDGSLSKMGAFQTFFGTSGPDGMAVDVEGRLVVA HASLGGAFVLNARGEVTHFVRSPTGSTVTNLAYRPGTHQIVMTESATGTLLMADLPASGAPLYSG >Mature_305_residues MWNLSFTPPELIEARVLTRLPDVLRRPQRSDWSDANKPGHIVDCFLEGPSFDRAGNLYVTDIPHGRIFRIDPALEWQLVA EYDGWPNGTALHADGSLWIADYRCGLLRLDPSTGQVSTVLGHRNSESFKGVNDLTFDAQGHCYFTDQGQSGLHDPTGRVY RLRDNGQLDLLLNNAPSPNGIALSPDGRVLFVAVTRGNAVWRAPLLPDGSLSKMGAFQTFFGTSGPDGMAVDVEGRLVVA HASLGGAFVLNARGEVTHFVRSPTGSTVTNLAYRPGTHQIVMTESATGTLLMADLPASGAPLYSG
Specific function: Exhibits lactonase activity. Acts in cells with perturbed membrane integrity and is possibly related to the membrane homeostasis [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 32982; Mature: 32982
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNLSFTPPELIEARVLTRLPDVLRRPQRSDWSDANKPGHIVDCFLEGPSFDRAGNLYVT CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE DIPHGRIFRIDPALEWQLVAEYDGWPNGTALHADGSLWIADYRCGLLRLDPSTGQVSTVL ECCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCEEEECCCCCCEEEEE GHRNSESFKGVNDLTFDAQGHCYFTDQGQSGLHDPTGRVYRLRDNGQLDLLLNNAPSPNG CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC IALSPDGRVLFVAVTRGNAVWRAPLLPDGSLSKMGAFQTFFGTSGPDGMAVDVEGRLVVA EEECCCCCEEEEEEECCCEEEEECCCCCCCCHHHCCEEECCCCCCCCCEEEEECCEEEEE HASLGGAFVLNARGEVTHFVRSPTGSTVTNLAYRPGTHQIVMTESATGTLLMADLPASGA EECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCC PLYSG CCCCC >Mature Secondary Structure MWNLSFTPPELIEARVLTRLPDVLRRPQRSDWSDANKPGHIVDCFLEGPSFDRAGNLYVT CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE DIPHGRIFRIDPALEWQLVAEYDGWPNGTALHADGSLWIADYRCGLLRLDPSTGQVSTVL ECCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCEEEECCCCCCEEEEE GHRNSESFKGVNDLTFDAQGHCYFTDQGQSGLHDPTGRVYRLRDNGQLDLLLNNAPSPNG CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCC IALSPDGRVLFVAVTRGNAVWRAPLLPDGSLSKMGAFQTFFGTSGPDGMAVDVEGRLVVA EEECCCCCEEEEEEECCCEEEEECCCCCCCCHHHCCEEECCCCCCCCCEEEEECCEEEEE HASLGGAFVLNARGEVTHFVRSPTGSTVTNLAYRPGTHQIVMTESATGTLLMADLPASGA EECCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCC PLYSG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA