Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is iciA [H]
Identifier: 91790323
GI number: 91790323
Start: 4745927
End: 4746856
Strand: Reverse
Name: iciA [H]
Synonym: Bpro_4491
Alternate gene names: 91790323
Gene position: 4746856-4745927 (Counterclockwise)
Preceding gene: 91790325
Following gene: 91790322
Centisome position: 91.28
GC content: 69.68
Gene sequence:
>930_bases ATGCTGGATGCCCGCCAACTCGATGCCCTCGCCGCCGTGATCGAACACGGCAGTTTTGGCGCAGCCGCCAAGGCCCTGAG CCTGACGCTGGCCGCCGTGTCGCTGCGCATCAAGTCGCTGGAGGACGCTTTGGGCCAGCGCCTGCTGGTGCGCGGCAAGC AGCTGCACCCCACGCCGGCGGGCCAGGCGCTGCTGGGGCATGTCAAACAGCTCAGGCTGCAGGAGGCGGACCTGCTGGCC CACCTGCAGGGAGGGCGCCGTCCGGGCGCAAAGGCGGTGCCGCTGCAAAGCCTGAGCGTGGCCGTCAATGCCGACTCGCT GACCGGCTGGTTCCTGGCCGGCGTGGCCCCGGCGCTTGAAAAACACCGGCTGCTGCTCGACATCGTGGTGGATGACCAGG ACCACACGCATGACGCGCTTAAAAATGGCGATGTGAGCGGCTGCGTGACGACGCTGGCGCAGTCGATGCGGGGCTGTGTG GCCGAGCCGCTGGGCGTCATGCGCTACCACTGTGTGGCGGCACCGGCGCTGGTGGCCAAGTGGCGCACCGGCAAGGAAAC CGTGGCAGCGCAGCGCCTGCTGGCCAGCCCGGCCGTCATCTTCAACCGCAAGGACGCGCTGCAGGACGCCTTCCTGGCGC AGCATTTCAATTTGCGCGACGCGCTGTATCCGCGTCACTTTGTGCCCGCCGTCGATGCCTTTGAACTGGCGCTGGAGCTG GGCCTGGGCTGGGGCATGGTGCCCGAGCAGCATCTGGCAGCGCGCGCGCACCGCCCGCCGCTGGCCGAGGTGCTGCCCGG CAAAACGGTCGATGTGGCGCTGTACTGGCAGCACTGGACCCGCGAGCCCGTGCCGGCCCAGCGGCTCACGCGGGCGGTGA AAGAGGCCGCCCGGGTTCTTGGGGCCCCGACGCTCTTCCCGCGGGTGTAG
Upstream 100 bases:
>100_bases CACCAAGTGTTCCGGAAAATCGCCTTGAGTTAAATGAATTTAAGTTAAATTGGTGTTGGTCAATAAATACTTGATAAAAG CAAACAAGGAACACCCTGCG
Downstream 100 bases:
>100_bases CGCACCGGCCAGCGCATGGCATGTCTGCAGGGCTGCCCCTGGAGGAGGCCATGGAAACCATGGCGCGCTCCTCTCGCTGC CCCCGCTTCTGTCCGGCCAA
Product: chromosome replication initiation inhibitor protein
Products: NA
Alternate protein names: OriC replication inhibitor [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV
Sequences:
>Translated_309_residues MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV >Mature_309_residues MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV
Specific function: Specific inhibitor of chromosomal initiation of replication in vitro. Binds the three 13-mers in the origin (oriC) to block initiation of replication [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789283, Length=294, Percent_Identity=35.0340136054422, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR017685 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 33349; Mature: 33349
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH KHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAK HCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL CCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCHHHHCCCCHHCCHHHHHHHHHHH GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVL CCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHH GAPTLFPRV CCCCCCCCC >Mature Secondary Structure MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH KHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAK HCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL CCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCHHHHCCCCHHCCHHHHHHHHHHH GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVL CCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHH GAPTLFPRV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA