Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is iciA [H]

Identifier: 91790323

GI number: 91790323

Start: 4745927

End: 4746856

Strand: Reverse

Name: iciA [H]

Synonym: Bpro_4491

Alternate gene names: 91790323

Gene position: 4746856-4745927 (Counterclockwise)

Preceding gene: 91790325

Following gene: 91790322

Centisome position: 91.28

GC content: 69.68

Gene sequence:

>930_bases
ATGCTGGATGCCCGCCAACTCGATGCCCTCGCCGCCGTGATCGAACACGGCAGTTTTGGCGCAGCCGCCAAGGCCCTGAG
CCTGACGCTGGCCGCCGTGTCGCTGCGCATCAAGTCGCTGGAGGACGCTTTGGGCCAGCGCCTGCTGGTGCGCGGCAAGC
AGCTGCACCCCACGCCGGCGGGCCAGGCGCTGCTGGGGCATGTCAAACAGCTCAGGCTGCAGGAGGCGGACCTGCTGGCC
CACCTGCAGGGAGGGCGCCGTCCGGGCGCAAAGGCGGTGCCGCTGCAAAGCCTGAGCGTGGCCGTCAATGCCGACTCGCT
GACCGGCTGGTTCCTGGCCGGCGTGGCCCCGGCGCTTGAAAAACACCGGCTGCTGCTCGACATCGTGGTGGATGACCAGG
ACCACACGCATGACGCGCTTAAAAATGGCGATGTGAGCGGCTGCGTGACGACGCTGGCGCAGTCGATGCGGGGCTGTGTG
GCCGAGCCGCTGGGCGTCATGCGCTACCACTGTGTGGCGGCACCGGCGCTGGTGGCCAAGTGGCGCACCGGCAAGGAAAC
CGTGGCAGCGCAGCGCCTGCTGGCCAGCCCGGCCGTCATCTTCAACCGCAAGGACGCGCTGCAGGACGCCTTCCTGGCGC
AGCATTTCAATTTGCGCGACGCGCTGTATCCGCGTCACTTTGTGCCCGCCGTCGATGCCTTTGAACTGGCGCTGGAGCTG
GGCCTGGGCTGGGGCATGGTGCCCGAGCAGCATCTGGCAGCGCGCGCGCACCGCCCGCCGCTGGCCGAGGTGCTGCCCGG
CAAAACGGTCGATGTGGCGCTGTACTGGCAGCACTGGACCCGCGAGCCCGTGCCGGCCCAGCGGCTCACGCGGGCGGTGA
AAGAGGCCGCCCGGGTTCTTGGGGCCCCGACGCTCTTCCCGCGGGTGTAG

Upstream 100 bases:

>100_bases
CACCAAGTGTTCCGGAAAATCGCCTTGAGTTAAATGAATTTAAGTTAAATTGGTGTTGGTCAATAAATACTTGATAAAAG
CAAACAAGGAACACCCTGCG

Downstream 100 bases:

>100_bases
CGCACCGGCCAGCGCATGGCATGTCTGCAGGGCTGCCCCTGGAGGAGGCCATGGAAACCATGGCGCGCTCCTCTCGCTGC
CCCCGCTTCTGTCCGGCCAA

Product: chromosome replication initiation inhibitor protein

Products: NA

Alternate protein names: OriC replication inhibitor [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA
HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV
AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL
GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV

Sequences:

>Translated_309_residues
MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA
HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV
AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL
GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV
>Mature_309_residues
MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPAGQALLGHVKQLRLQEADLLA
HLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALEKHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCV
AEPLGVMRYHCVAAPALVAKWRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL
GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVLGAPTLFPRV

Specific function: Specific inhibitor of chromosomal initiation of replication in vitro. Binds the three 13-mers in the origin (oriC) to block initiation of replication [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789283, Length=294, Percent_Identity=35.0340136054422, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR017685
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33349; Mature: 33349

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GQALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
KHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAK
HCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL
CCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCHHHHCCCCHHCCHHHHHHHHHHH
GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVL
CCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
GAPTLFPRV
CCCCCCCCC
>Mature Secondary Structure
MLDARQLDALAAVIEHGSFGAAAKALSLTLAAVSLRIKSLEDALGQRLLVRGKQLHPTPA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GQALLGHVKQLRLQEADLLAHLQGGRRPGAKAVPLQSLSVAVNADSLTGWFLAGVAPALE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
KHRLLLDIVVDDQDHTHDALKNGDVSGCVTTLAQSMRGCVAEPLGVMRYHCVAAPALVAK
HCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRTGKETVAAQRLLASPAVIFNRKDALQDAFLAQHFNLRDALYPRHFVPAVDAFELALEL
CCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCHHHHCCCCHHCCHHHHHHHHHHH
GLGWGMVPEQHLAARAHRPPLAEVLPGKTVDVALYWQHWTREPVPAQRLTRAVKEAARVL
CCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
GAPTLFPRV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA