Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789320
Identifier: 91789320
GI number: 91789320
Start: 3667913
End: 3668566
Strand: Direct
Name: 91789320
Synonym: Bpro_3465
Alternate gene names: NA
Gene position: 3667913-3668566 (Clockwise)
Preceding gene: 91789313
Following gene: 91789323
Centisome position: 70.53
GC content: 66.82
Gene sequence:
>654_bases ATGTATAGCCGGCCACCTTCTTCCGGGTTCGGAAAACCCGCTGCAGCCAAACCCCGCAAACGCCCCACGCAGGCCCGCGC GGTGTTCACCGTGCAGGCGATTTACGACGCCTTTGTTCGGATTTGGCGCCAGCACGGATGGGCCGGCGTGACCACCCGTG CGGTGGCGCTGGAAACCGGCGTGTCGGTCGGCACGCTCTATGACTATTTCCCCAACAAGACGGCGCTGCTCTCAGGCTAT GTGCGCCATTGCATGGAGCAGCTGCTGCAGGCCATTGAGCAGCAGGCGGTGGCGCCGCCTCACCTCCCGTGGCAGGCACG GCTGCAGACGCTGGTCCGCCTGGTCTGTGGTGTGAACGCGCCGGAACTGCCCTGGTTTGACGCGGACATGCTGGCCCTGG AAGCCGGGATTGCCGAAGTGAAACACCACCGGCGCGCGCACGAGGAACTGCTCGCGGCGTGGACCCGGGTGTTTGATGCC TGCAACGACCTGCCCGCGCGGCCCTCGCGCGAAGCGATCCAGGCCATACACCTGGCGGTCTGGGGCGCAAGGCGCTACGG CCTGCTGATTGGCCTGAGCGACGCCGAAACCGCCCAATGGGCCCTGCAGATGGAGCGCCTGTGCCTGGCGATGGTGGAAG CCGGCCAACCCTGA
Upstream 100 bases:
>100_bases GCAGCCGTGTCAGCGTGGCCGGATTGTTCATGGTCGTTCTTCCTTTGGATCATCTGGAATTTGATCAAGCGATCAGTACA TGATCAGTACATGACAACCA
Downstream 100 bases:
>100_bases GGCGCCCGCCCTCCCTTGCCTGATGTTCCGGCTACTTGTAGCGCTCGCGTGCCAGTGCGGCACCTTGCGCCAGCGCCTGC AGTTTTTTAAGCGCCACGTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP
Sequences:
>Translated_217_residues MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP >Mature_217_residues MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24147; Mature: 24147
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC VSVGTLYDYFPNKTALLSGYVRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNA CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC PELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDACNDLPARPSREAIQAIHLAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH WGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC VSVGTLYDYFPNKTALLSGYVRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNA CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC PELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDACNDLPARPSREAIQAIHLAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH WGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA