Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789320

Identifier: 91789320

GI number: 91789320

Start: 3667913

End: 3668566

Strand: Direct

Name: 91789320

Synonym: Bpro_3465

Alternate gene names: NA

Gene position: 3667913-3668566 (Clockwise)

Preceding gene: 91789313

Following gene: 91789323

Centisome position: 70.53

GC content: 66.82

Gene sequence:

>654_bases
ATGTATAGCCGGCCACCTTCTTCCGGGTTCGGAAAACCCGCTGCAGCCAAACCCCGCAAACGCCCCACGCAGGCCCGCGC
GGTGTTCACCGTGCAGGCGATTTACGACGCCTTTGTTCGGATTTGGCGCCAGCACGGATGGGCCGGCGTGACCACCCGTG
CGGTGGCGCTGGAAACCGGCGTGTCGGTCGGCACGCTCTATGACTATTTCCCCAACAAGACGGCGCTGCTCTCAGGCTAT
GTGCGCCATTGCATGGAGCAGCTGCTGCAGGCCATTGAGCAGCAGGCGGTGGCGCCGCCTCACCTCCCGTGGCAGGCACG
GCTGCAGACGCTGGTCCGCCTGGTCTGTGGTGTGAACGCGCCGGAACTGCCCTGGTTTGACGCGGACATGCTGGCCCTGG
AAGCCGGGATTGCCGAAGTGAAACACCACCGGCGCGCGCACGAGGAACTGCTCGCGGCGTGGACCCGGGTGTTTGATGCC
TGCAACGACCTGCCCGCGCGGCCCTCGCGCGAAGCGATCCAGGCCATACACCTGGCGGTCTGGGGCGCAAGGCGCTACGG
CCTGCTGATTGGCCTGAGCGACGCCGAAACCGCCCAATGGGCCCTGCAGATGGAGCGCCTGTGCCTGGCGATGGTGGAAG
CCGGCCAACCCTGA

Upstream 100 bases:

>100_bases
GCAGCCGTGTCAGCGTGGCCGGATTGTTCATGGTCGTTCTTCCTTTGGATCATCTGGAATTTGATCAAGCGATCAGTACA
TGATCAGTACATGACAACCA

Downstream 100 bases:

>100_bases
GGCGCCCGCCCTCCCTTGCCTGATGTTCCGGCTACTTGTAGCGCTCGCGTGCCAGTGCGGCACCTTGCGCCAGCGCCTGC
AGTTTTTTAAGCGCCACGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY
VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA
CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP

Sequences:

>Translated_217_residues
MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY
VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA
CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP
>Mature_217_residues
MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETGVSVGTLYDYFPNKTALLSGY
VRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNAPELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDA
CNDLPARPSREAIQAIHLAVWGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24147; Mature: 24147

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
VSVGTLYDYFPNKTALLSGYVRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
PELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDACNDLPARPSREAIQAIHLAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP
HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYSRPPSSGFGKPAAAKPRKRPTQARAVFTVQAIYDAFVRIWRQHGWAGVTTRAVALETG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
VSVGTLYDYFPNKTALLSGYVRHCMEQLLQAIEQQAVAPPHLPWQARLQTLVRLVCGVNA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
PELPWFDADMLALEAGIAEVKHHRRAHEELLAAWTRVFDACNDLPARPSREAIQAIHLAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WGARRYGLLIGLSDAETAQWALQMERLCLAMVEAGQP
HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA