Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is catA [H]

Identifier: 91789313

GI number: 91789313

Start: 3663110

End: 3663760

Strand: Direct

Name: catA [H]

Synonym: Bpro_3458

Alternate gene names: 91789313

Gene position: 3663110-3663760 (Clockwise)

Preceding gene: 91789312

Following gene: 91789320

Centisome position: 70.44

GC content: 66.82

Gene sequence:

>651_bases
ATGCGTCCAAAGCCTCCTGACCGGCCAGCTCCATCGGGCTGGAACCGCCGTGCCGTTGCGCTGGCGCTGGTTGCCTCGCC
TGTTGTGTGGACAGGCGCCCGCGCCCAGCCGGCTCGTCCGCGGCGCGCAACACCCAGCCAGACCGAAGGCCCGTTCTACC
CGCTCACCCTGCCGCAGGACGCAGACTTTGACCTGCTGCGCAACGGCGCGCTGAATTACACCCAGGGGCAGCCAAGCTGG
CTCGAAGGCTCGGTTACCGACCTGAACGGCAAGCCCTTGCGGGGCGCCCAGGTTGAAATCTGGCAATGCGACCACGCCGG
CCACTACGATCACCCCGGCGACGGCGGCCGTATCGACAGGGCGTTTCAGGGTTTCGGCCGCGTGACGGTGAATGCACAGG
GCGAGTACCGCTTTCGCACCATTCGTCCGGTGGCTTACGGGAGCCGCACGCCGCACATCCATGTGAAGGTCAAGCTCGGT
GGCCGCGAGTTGCTGACGACGCAACTCTATGTGGCCGGTGAGCCGCTGAACCAGCGTGATTTTTTATGGCGCAACCTGCG
GGACGATGACGCCCGCGCAGCACTCACCGTGCCGTTCACCCCTGTGCCGGACGGGCTGCGGGCGCAGTTCCCGCTGGTGG
TGGAGGTCTGA

Upstream 100 bases:

>100_bases
ACAATGGATGCAATTTGAAAGCCCGCCGCCCTTCTGAGCCTTTTTGTGAATCGCCTGCTCAGACGGGGTTCGCGATCTCC
GGAAAAAATGGAGCATCGTC

Downstream 100 bases:

>100_bases
AGCTGGCGGTGGAAGCTGGCCACCCGGAACCCGGGCACCCTAATCTCGGCGTGCTAATCGCGCACAACCAGCACCGGCAA
ATGGGCATGTGACAGCACCT

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: 1,2-CTD [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRPKPPDRPAPSGWNRRAVALALVASPVVWTGARAQPARPRRATPSQTEGPFYPLTLPQDADFDLLRNGALNYTQGQPSW
LEGSVTDLNGKPLRGAQVEIWQCDHAGHYDHPGDGGRIDRAFQGFGRVTVNAQGEYRFRTIRPVAYGSRTPHIHVKVKLG
GRELLTTQLYVAGEPLNQRDFLWRNLRDDDARAALTVPFTPVPDGLRAQFPLVVEV

Sequences:

>Translated_216_residues
MRPKPPDRPAPSGWNRRAVALALVASPVVWTGARAQPARPRRATPSQTEGPFYPLTLPQDADFDLLRNGALNYTQGQPSW
LEGSVTDLNGKPLRGAQVEIWQCDHAGHYDHPGDGGRIDRAFQGFGRVTVNAQGEYRFRTIRPVAYGSRTPHIHVKVKLG
GRELLTTQLYVAGEPLNQRDFLWRNLRDDDARAALTVPFTPVPDGLRAQFPLVVEV
>Mature_216_residues
MRPKPPDRPAPSGWNRRAVALALVASPVVWTGARAQPARPRRATPSQTEGPFYPLTLPQDADFDLLRNGALNYTQGQPSW
LEGSVTDLNGKPLRGAQVEIWQCDHAGHYDHPGDGGRIDRAFQGFGRVTVNAQGEYRFRTIRPVAYGSRTPHIHVKVKLG
GRELLTTQLYVAGEPLNQRDFLWRNLRDDDARAALTVPFTPVPDGLRAQFPLVVEV

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR012801
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.1 [H]

Molecular weight: Translated: 23990; Mature: 23990

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKPPDRPAPSGWNRRAVALALVASPVVWTGARAQPARPRRATPSQTEGPFYPLTLPQD
CCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
ADFDLLRNGALNYTQGQPSWLEGSVTDLNGKPLRGAQVEIWQCDHAGHYDHPGDGGRIDR
CCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCH
AFQGFGRVTVNAQGEYRFRTIRPVAYGSRTPHIHVKVKLGGRELLTTQLYVAGEPLNQRD
HHCCCCEEEEECCCCEEEEEECEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHH
FLWRNLRDDDARAALTVPFTPVPDGLRAQFPLVVEV
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MRPKPPDRPAPSGWNRRAVALALVASPVVWTGARAQPARPRRATPSQTEGPFYPLTLPQD
CCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
ADFDLLRNGALNYTQGQPSWLEGSVTDLNGKPLRGAQVEIWQCDHAGHYDHPGDGGRIDR
CCHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCH
AFQGFGRVTVNAQGEYRFRTIRPVAYGSRTPHIHVKVKLGGRELLTTQLYVAGEPLNQRD
HHCCCCEEEEECCCCEEEEEECEEEECCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHH
FLWRNLRDDDARAALTVPFTPVPDGLRAQFPLVVEV
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3170486; 10801478 [H]