Click here to switch to the map view.

The map label for this gene is ybhS [H]

Identifier: 91789309

GI number: 91789309

Start: 3659124

End: 3660248

Strand: Direct

Name: ybhS [H]

Synonym: Bpro_3454

Alternate gene names: 91789309

Gene position: 3659124-3660248 (Clockwise)

Preceding gene: 91789308

Following gene: 91789310

Centisome position: 70.36

GC content: 64.27

Gene sequence:

>1125_bases
ATGAGCTGGTCCCGCTTCCTCGCCATCCTGATCAAGGAATTTCGCCAGGTCCGCCGCGACCGCCTGACCTTCGGCATGAT
GGTGGGCGTGCCCATCATCCAATTGCTGCTGTTCGGCTTCGCCATCAACAGCGACCCCAAACATTTGCCCGCCGCCATCG
TCGTGGCCGACCAGAGCGAGTTTTCGCGCAGCTTCGTGGCGGGCCTGGAGAATTCGGAATACTTTCGCATCACCCACCGA
CTGCAAAGCGAGGCCGAAGGCGACGAACTGCTGGCCACCGGCCAGGTGCAGTTTGTACTGGTGGTGCCGCCGGACTTCTC
GCGCAAGCTGATACGCGGCGAGCACCCGGTCATACTGCTCGCCGCCGATGCGACCGACCCCTCCGCCACCGGCAACGCCA
TCGCGGCGCTGAGCGGCATCGGCCAGCGCGCCATCGGCCGCGAGCTGTACGGCCCACTGGCTTCGCTGCGACCGGCTGAC
GCGCCATTCGAGGTGCGCGTGCAGCGCCGCTACAACCCCGAAGGCCTGACCAGCTACAACGTGGTTCCGGGCCTGATCGG
TGTGATCCTGACCATGACCATGGTGATGATGACCTCGCTGGCGATGACGCGCGAGCGCGAGCGCGGCACCATGGAAAACC
TGCTGGCCACCCCGGCGCGCCCGCTGGAGGTGATGCTGGGCAAGATCGTTCCCTACATCTTGATCGGCTACGTGCAGGTG
ATCGTGATCCTGATCGCCGCGCGGCTGGTTTTCAACGTGCCCATGGTCGGCAGCCTGGTGCTGCTCTCGGTCGTGCTGGT
GCTGTTCATCGCGGCCAACCTGGCGGTTGGCTTCACGTTCTCCACCATCGCGCGCAACCAGTTGCAGGCGATGCAACTCA
CTTTTTTCTTTTTCCTGCCGTCGATGCTGCTGACCGGTTTCATGTTCCCGTTTCGCGGCATGCCGGCCTGGGCGCAAGCC
ATCGGCGAACTCCTGCCGCTGACGCACTTCCTGCGCATCGTGCGCGGCATCATGCTCAAGGGCAATGGCATCGTGGAAGT
GACCGCGCAGCTGTGGCCGATCGCCCTGTTCATGCTGGTGGCAGGGCTCGTAGCCCTCAAGCGCTACCGGCAGACCGTGG
ACTGA

Upstream 100 bases:

>100_bases
CTATCGAGCCCAGCCTCGAGGACGTGTTCATCGCGCTGATGCAGGACGCGCAGGACAACTATTCCGTTGAAAAAACAGGA
GAAAAAACAGGAGCAAAGGC

Downstream 100 bases:

>100_bases
GGGTGAACCGAGCATCGCCTGGGACCAGCCCAGTTAACATGGCGCCACAACAAAGTTAATGGATTCTTGATCCGCTGAGG
GAATTTTATGCAACGCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSWSRFLAILIKEFRQVRRDRLTFGMMVGVPIIQLLLFGFAINSDPKHLPAAIVVADQSEFSRSFVAGLENSEYFRITHR
LQSEAEGDELLATGQVQFVLVVPPDFSRKLIRGEHPVILLAADATDPSATGNAIAALSGIGQRAIGRELYGPLASLRPAD
APFEVRVQRRYNPEGLTSYNVVPGLIGVILTMTMVMMTSLAMTRERERGTMENLLATPARPLEVMLGKIVPYILIGYVQV
IVILIAARLVFNVPMVGSLVLLSVVLVLFIAANLAVGFTFSTIARNQLQAMQLTFFFFLPSMLLTGFMFPFRGMPAWAQA
IGELLPLTHFLRIVRGIMLKGNGIVEVTAQLWPIALFMLVAGLVALKRYRQTVD

Sequences:

>Translated_374_residues
MSWSRFLAILIKEFRQVRRDRLTFGMMVGVPIIQLLLFGFAINSDPKHLPAAIVVADQSEFSRSFVAGLENSEYFRITHR
LQSEAEGDELLATGQVQFVLVVPPDFSRKLIRGEHPVILLAADATDPSATGNAIAALSGIGQRAIGRELYGPLASLRPAD
APFEVRVQRRYNPEGLTSYNVVPGLIGVILTMTMVMMTSLAMTRERERGTMENLLATPARPLEVMLGKIVPYILIGYVQV
IVILIAARLVFNVPMVGSLVLLSVVLVLFIAANLAVGFTFSTIARNQLQAMQLTFFFFLPSMLLTGFMFPFRGMPAWAQA
IGELLPLTHFLRIVRGIMLKGNGIVEVTAQLWPIALFMLVAGLVALKRYRQTVD
>Mature_373_residues
SWSRFLAILIKEFRQVRRDRLTFGMMVGVPIIQLLLFGFAINSDPKHLPAAIVVADQSEFSRSFVAGLENSEYFRITHRL
QSEAEGDELLATGQVQFVLVVPPDFSRKLIRGEHPVILLAADATDPSATGNAIAALSGIGQRAIGRELYGPLASLRPADA
PFEVRVQRRYNPEGLTSYNVVPGLIGVILTMTMVMMTSLAMTRERERGTMENLLATPARPLEVMLGKIVPYILIGYVQVI
VILIAARLVFNVPMVGSLVLLSVVLVLFIAANLAVGFTFSTIARNQLQAMQLTFFFFLPSMLLTGFMFPFRGMPAWAQAI
GELLPLTHFLRIVRGIMLKGNGIVEVTAQLWPIALFMLVAGLVALKRYRQTVD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=346, Percent_Identity=30.3468208092486, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=27.9132791327913, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI48994943, Length=363, Percent_Identity=27.5482093663912, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI226510979, Length=388, Percent_Identity=29.3814432989691, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24650855, Length=396, Percent_Identity=22.7272727272727, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24650853, Length=396, Percent_Identity=22.7272727272727, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI85725260, Length=373, Percent_Identity=23.3243967828418, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI85725262, Length=373, Percent_Identity=23.3243967828418, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41333; Mature: 41202

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSRFLAILIKEFRQVRRDRLTFGMMVGVPIIQLLLFGFAINSDPKHLPAAIVVADQSE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHH
FSRSFVAGLENSEYFRITHRLQSEAEGDELLATGQVQFVLVVPPDFSRKLIRGEHPVILL
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCHHHHHHCCCCCEEEE
AADATDPSATGNAIAALSGIGQRAIGRELYGPLASLRPADAPFEVRVQRRYNPEGLTSYN
EECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
VVPGLIGVILTMTMVMMTSLAMTRERERGTMENLLATPARPLEVMLGKIVPYILIGYVQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVILIAARLVFNVPMVGSLVLLSVVLVLFIAANLAVGFTFSTIARNQLQAMQLTFFFFLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMLLTGFMFPFRGMPAWAQAIGELLPLTHFLRIVRGIMLKGNGIVEVTAQLWPIALFMLV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
AGLVALKRYRQTVD
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SWSRFLAILIKEFRQVRRDRLTFGMMVGVPIIQLLLFGFAINSDPKHLPAAIVVADQSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHH
FSRSFVAGLENSEYFRITHRLQSEAEGDELLATGQVQFVLVVPPDFSRKLIRGEHPVILL
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCHHHHHHCCCCCEEEE
AADATDPSATGNAIAALSGIGQRAIGRELYGPLASLRPADAPFEVRVQRRYNPEGLTSYN
EECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC
VVPGLIGVILTMTMVMMTSLAMTRERERGTMENLLATPARPLEVMLGKIVPYILIGYVQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVILIAARLVFNVPMVGSLVLLSVVLVLFIAANLAVGFTFSTIARNQLQAMQLTFFFFLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMLLTGFMFPFRGMPAWAQAIGELLPLTHFLRIVRGIMLKGNGIVEVTAQLWPIALFMLV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
AGLVALKRYRQTVD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]