Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789159
Identifier: 91789159
GI number: 91789159
Start: 3496790
End: 3499138
Strand: Direct
Name: 91789159
Synonym: Bpro_3301
Alternate gene names: NA
Gene position: 3496790-3499138 (Clockwise)
Preceding gene: 91789158
Following gene: 91789160
Centisome position: 67.24
GC content: 66.11
Gene sequence:
>2349_bases ATGATGGCCAGGCTTCTCCGGCGCCAGTTCTTGCCGGTCTGGATCTGGCTGGCGTTTTTGCTGGCCTGCGGCGCCATCAT CAGCCGCACGCCCATCACCACCGACCTGTCGGCATTCTTGCCGCGCAATCCTACGACCGAGCAGCAACTGCTGATGGATC AACTGCGTGAAGGCCTGGCCTCACGGCTGATTCTGGTGGGCATCGAAGGCGCCGATGCGCCCACGCGTGCCCGACTGTCC AAAGCAGTGGCCCAGCGCCTGCGCGCCGATTCTGCCTTTGTCTCCATCAACAATGGCGAGCCGGTCAACACCGAGCGCGA CCGCGCTTACCTGTTCAACAACCGCTACCTGCTCAGCCCGGCGGTGACGCCCGAACGCTTCAGTGCCGAGGGCCTGCATG CGGCGCTGGGCGAAAGCATCGATCTGCTGGCCTCGCCCGCCGGCTTGCTGATGAAGTCCATGCTGCCCCGCGACCCGACC GGCGAAATGGTGCAGCTGCTCGGCGAACTCGACAACGGCAAACACCCGCCCCTGGTCGACGGCACCTGGGCCTCGAGCGA CGGTGCGCGCGCCCTGATGCTGCTACAAACGCGAGCGGCGGGCTCGGACACCGATGCCCAGCAAAGCGCCATGGCCGCCA TCCGGCAGGCGTTTGATGCAGCGCCCCAGGCAAGTCCTGACGCCCGGCTGGTGATGAGCGGCCCCGGCGTGTTTTCTGTG ACATCGCGCGAGACCATCCGAAGCCAGGTCAGCCGGCTGTCCCTGATCAGCGTTGTGCTCATTGCCACGCTGCTGTTGCT GGTCTATCGCTCGCTGACGGCGCTGGCCCTGGGTTTTCTGCCTGTCCTCAGCGGTGTGCTGGCCGGTGTTGCAGCGGTGA GCCTGGGTTTTGGAACGGTGCACGGCATCACCCTGGGCTTCGGCACCGCCTTGATTGGCGAGGCGGTGGACTATTCGATC TACCTCTTTGTGCAGTCCGAACAGGCCGGCGCTGACCCGCAAAACTGGGTCAAGCGCTTCTGGCCCACGGTGCGGCTCGG CGTGCTGACCTCGATATTCGGCTTTGCCTCGCTACTGCTGTCGGGCTTTCCCGGTCTGGCGCAACTCGGCCTGTACGCGA TTGCCGGCCTGGTCGCCGCCGCGACCATGACCCGCTTTGTGCTGCCCCACCTGCTGCCAGCGAAGTTCCGCATCCATGAT GTATCGGCGGTCGGCCGCCTGCTGAGCCGCCTGACGCTGCGCGCCGCGGCGCTGCGCTGGCCAGCGGCGGTCCTCCTGCT GGCGGCCTGCGCCGTACTGGTCGGCCAGCGCGCCACCTTGCTGAATGAGAAAATTTCCTCGCTGAGCCCGGTGTCGCAGG CCGAGGTGGCGCTGGACGAGCGCTTGCGCGCCGACATGGGCGCGCCCGATGTGCGTTACCTGGTGGTGGTATCCGGCACC AGCCGGGAATCCGTGCTGCATGACTCCGAACTGGTTTCCGCGCTGCTGCAGACGCAGGTCGATCAGGGCGATCTGGCCGG TTTTGAAAGCCCCAGCCGCTATCTTCCGAGCACAGCCACCCAGCGCGCCCGCCAGGCCAGCCTGCCTCCGCCTGGCGAGT TGCAGGCGCGCCTGACGCAAGCCGTTCAGGAGCTGCCGGTCCGAGCGCAACTGTTCACGCCATTTCTTGCCGACGTTGAA GCCACCCGCAGCAGACCCCTGCTGCTGCCGGGCGACCTGGAGCGAACCTCGATGGCGATGGCGGTAGATGCGCTGCTGCT GCGGCAGGATCGAGGCTGGACGGCCTTGCTGCCGCTCAACGCCCCTGAGGGCGCCGGCATCCACGCCGGAAAGATTCGCG CAGCCCTGGCTACCACGGGCCTGCCGAATGCGCTGTTTGTCGACCTGAAGGCCGAGTCCGACCGGCTGTATTCGGGCTAC CTGCATGAAGCCGCGCTGCTCTCGCTGGGTGGGTTGGTGGCCATCGTCGCTCTGCTGCTGCTGGTGTTCCGCTCGCCGAT GCGCGTGCTGCGCACCATCGCGCCGCTGGCCGCCGCCGTGGTGACAGTCACCGCCGGGCTGGCCCTGTTTGGCCAGCAAT TGACCATTTTGCATCTGGTGGGCTTGCTGCTGGTGGTGGCTGTGGGCTCCAACTACGCGCTGTTTTTTGACCGGCCCGAA CCGCAGGAACCCATTTCCCATCGCACCCTGGCCTCTATGCTGCTGGCCAACCTCACCACCGTTGCAGGTTTTGGGCTGCT GGCTTTTTCCAAGGTATCCATACTGCACGCCATGGGTGTGACCGTGGCACCGGGCGTCATCCTGGCGCTCGTCTATGCCG CCATTTTTGCGAGGCCATCCCGTGCCTGA
Upstream 100 bases:
>100_bases GCATTCGCATTGCCGGCAGCCGTGCGGAGGTCAAGTCGATTGAAATCGAGCAAGCCGACAAGGACCGCTCGGTGATGGTC ATCGACAAGCTGGCCGCTCC
Downstream 100 bases:
>100_bases TCCGCGCTGGCACTCCACGCCGCTGATCCGCGCATCCCTTGCGCTGCATGGGCTGGCACTGGTCGCCGTCGTCGCCGTGC CCGGGTTGTGGCGCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Drug Efflux Pump RND Superfamily; Phospholipid/Glycerol Acyltransferase; RND Superfamily Drug Exporter; Transmembrane Protein; Mmpl Exporter Transmembrane Protein; XanthomoNADin Exporter; Exporter; MMPL Domain Protein; Patched Family Protein; Inner Membrane Protein; Exporter TRANSMEMBRANE PROTEIN; Integral Membrane Protein; Acyltransferase; Phosphoglucomutase/Phosphomannomutase Alpha/Beta/Subunit
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MMARLLRRQFLPVWIWLAFLLACGAIISRTPITTDLSAFLPRNPTTEQQLLMDQLREGLASRLILVGIEGADAPTRARLS KAVAQRLRADSAFVSINNGEPVNTERDRAYLFNNRYLLSPAVTPERFSAEGLHAALGESIDLLASPAGLLMKSMLPRDPT GEMVQLLGELDNGKHPPLVDGTWASSDGARALMLLQTRAAGSDTDAQQSAMAAIRQAFDAAPQASPDARLVMSGPGVFSV TSRETIRSQVSRLSLISVVLIATLLLLVYRSLTALALGFLPVLSGVLAGVAAVSLGFGTVHGITLGFGTALIGEAVDYSI YLFVQSEQAGADPQNWVKRFWPTVRLGVLTSIFGFASLLLSGFPGLAQLGLYAIAGLVAAATMTRFVLPHLLPAKFRIHD VSAVGRLLSRLTLRAAALRWPAAVLLLAACAVLVGQRATLLNEKISSLSPVSQAEVALDERLRADMGAPDVRYLVVVSGT SRESVLHDSELVSALLQTQVDQGDLAGFESPSRYLPSTATQRARQASLPPPGELQARLTQAVQELPVRAQLFTPFLADVE ATRSRPLLLPGDLERTSMAMAVDALLLRQDRGWTALLPLNAPEGAGIHAGKIRAALATTGLPNALFVDLKAESDRLYSGY LHEAALLSLGGLVAIVALLLLVFRSPMRVLRTIAPLAAAVVTVTAGLALFGQQLTILHLVGLLLVVAVGSNYALFFDRPE PQEPISHRTLASMLLANLTTVAGFGLLAFSKVSILHAMGVTVAPGVILALVYAAIFARPSRA
Sequences:
>Translated_782_residues MMARLLRRQFLPVWIWLAFLLACGAIISRTPITTDLSAFLPRNPTTEQQLLMDQLREGLASRLILVGIEGADAPTRARLS KAVAQRLRADSAFVSINNGEPVNTERDRAYLFNNRYLLSPAVTPERFSAEGLHAALGESIDLLASPAGLLMKSMLPRDPT GEMVQLLGELDNGKHPPLVDGTWASSDGARALMLLQTRAAGSDTDAQQSAMAAIRQAFDAAPQASPDARLVMSGPGVFSV TSRETIRSQVSRLSLISVVLIATLLLLVYRSLTALALGFLPVLSGVLAGVAAVSLGFGTVHGITLGFGTALIGEAVDYSI YLFVQSEQAGADPQNWVKRFWPTVRLGVLTSIFGFASLLLSGFPGLAQLGLYAIAGLVAAATMTRFVLPHLLPAKFRIHD VSAVGRLLSRLTLRAAALRWPAAVLLLAACAVLVGQRATLLNEKISSLSPVSQAEVALDERLRADMGAPDVRYLVVVSGT SRESVLHDSELVSALLQTQVDQGDLAGFESPSRYLPSTATQRARQASLPPPGELQARLTQAVQELPVRAQLFTPFLADVE ATRSRPLLLPGDLERTSMAMAVDALLLRQDRGWTALLPLNAPEGAGIHAGKIRAALATTGLPNALFVDLKAESDRLYSGY LHEAALLSLGGLVAIVALLLLVFRSPMRVLRTIAPLAAAVVTVTAGLALFGQQLTILHLVGLLLVVAVGSNYALFFDRPE PQEPISHRTLASMLLANLTTVAGFGLLAFSKVSILHAMGVTVAPGVILALVYAAIFARPSRA >Mature_782_residues MMARLLRRQFLPVWIWLAFLLACGAIISRTPITTDLSAFLPRNPTTEQQLLMDQLREGLASRLILVGIEGADAPTRARLS KAVAQRLRADSAFVSINNGEPVNTERDRAYLFNNRYLLSPAVTPERFSAEGLHAALGESIDLLASPAGLLMKSMLPRDPT GEMVQLLGELDNGKHPPLVDGTWASSDGARALMLLQTRAAGSDTDAQQSAMAAIRQAFDAAPQASPDARLVMSGPGVFSV TSRETIRSQVSRLSLISVVLIATLLLLVYRSLTALALGFLPVLSGVLAGVAAVSLGFGTVHGITLGFGTALIGEAVDYSI YLFVQSEQAGADPQNWVKRFWPTVRLGVLTSIFGFASLLLSGFPGLAQLGLYAIAGLVAAATMTRFVLPHLLPAKFRIHD VSAVGRLLSRLTLRAAALRWPAAVLLLAACAVLVGQRATLLNEKISSLSPVSQAEVALDERLRADMGAPDVRYLVVVSGT SRESVLHDSELVSALLQTQVDQGDLAGFESPSRYLPSTATQRARQASLPPPGELQARLTQAVQELPVRAQLFTPFLADVE ATRSRPLLLPGDLERTSMAMAVDALLLRQDRGWTALLPLNAPEGAGIHAGKIRAALATTGLPNALFVDLKAESDRLYSGY LHEAALLSLGGLVAIVALLLLVFRSPMRVLRTIAPLAAAVVTVTAGLALFGQQLTILHLVGLLLVVAVGSNYALFFDRPE PQEPISHRTLASMLLANLTTVAGFGLLAFSKVSILHAMGVTVAPGVILALVYAAIFARPSRA
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83220; Mature: 83220
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMARLLRRQFLPVWIWLAFLLACGAIISRTPITTDLSAFLPRNPTTEQQLLMDQLREGLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH SRLILVGIEGADAPTRARLSKAVAQRLRADSAFVSINNGEPVNTERDRAYLFNNRYLLSP CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCEEEECC AVTPERFSAEGLHAALGESIDLLASPAGLLMKSMLPRDPTGEMVQLLGELDNGKHPPLVD CCCCHHHCCCHHHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC GTWASSDGARALMLLQTRAAGSDTDAQQSAMAAIRQAFDAAPQASPDARLVMSGPGVFSV CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEE TSRETIRSQVSRLSLISVVLIATLLLLVYRSLTALALGFLPVLSGVLAGVAAVSLGFGTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH HGITLGFGTALIGEAVDYSIYLFVQSEQAGADPQNWVKRFWPTVRLGVLTSIFGFASLLL HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFPGLAQLGLYAIAGLVAAATMTRFVLPHLLPAKFRIHDVSAVGRLLSRLTLRAAALRW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHH PAAVLLLAACAVLVGQRATLLNEKISSLSPVSQAEVALDERLRADMGAPDVRYLVVVSGT HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECC SRESVLHDSELVSALLQTQVDQGDLAGFESPSRYLPSTATQRARQASLPPPGELQARLTQ CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHH AVQELPVRAQLFTPFLADVEATRSRPLLLPGDLERTSMAMAVDALLLRQDRGWTALLPLN HHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC APEGAGIHAGKIRAALATTGLPNALFVDLKAESDRLYSGYLHEAALLSLGGLVAIVALLL CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHH LVFRSPMRVLRTIAPLAAAVVTVTAGLALFGQQLTILHLVGLLLVVAVGSNYALFFDRPE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC PQEPISHRTLASMLLANLTTVAGFGLLAFSKVSILHAMGVTVAPGVILALVYAAIFARPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC RA CC >Mature Secondary Structure MMARLLRRQFLPVWIWLAFLLACGAIISRTPITTDLSAFLPRNPTTEQQLLMDQLREGLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH SRLILVGIEGADAPTRARLSKAVAQRLRADSAFVSINNGEPVNTERDRAYLFNNRYLLSP CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCEEEECC AVTPERFSAEGLHAALGESIDLLASPAGLLMKSMLPRDPTGEMVQLLGELDNGKHPPLVD CCCCHHHCCCHHHHHHCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC GTWASSDGARALMLLQTRAAGSDTDAQQSAMAAIRQAFDAAPQASPDARLVMSGPGVFSV CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEE TSRETIRSQVSRLSLISVVLIATLLLLVYRSLTALALGFLPVLSGVLAGVAAVSLGFGTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH HGITLGFGTALIGEAVDYSIYLFVQSEQAGADPQNWVKRFWPTVRLGVLTSIFGFASLLL HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFPGLAQLGLYAIAGLVAAATMTRFVLPHLLPAKFRIHDVSAVGRLLSRLTLRAAALRW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHH PAAVLLLAACAVLVGQRATLLNEKISSLSPVSQAEVALDERLRADMGAPDVRYLVVVSGT HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECC SRESVLHDSELVSALLQTQVDQGDLAGFESPSRYLPSTATQRARQASLPPPGELQARLTQ CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHH AVQELPVRAQLFTPFLADVEATRSRPLLLPGDLERTSMAMAVDALLLRQDRGWTALLPLN HHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC APEGAGIHAGKIRAALATTGLPNALFVDLKAESDRLYSGYLHEAALLSLGGLVAIVALLL CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHH LVFRSPMRVLRTIAPLAAAVVTVTAGLALFGQQLTILHLVGLLLVVAVGSNYALFFDRPE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC PQEPISHRTLASMLLANLTTVAGFGLLAFSKVSILHAMGVTVAPGVILALVYAAIFARPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC RA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA