Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is cobA [H]
Identifier: 91789141
GI number: 91789141
Start: 3477358
End: 3478182
Strand: Direct
Name: cobA [H]
Synonym: Bpro_3281
Alternate gene names: 91789141
Gene position: 3477358-3478182 (Clockwise)
Preceding gene: 91789140
Following gene: 91789142
Centisome position: 66.87
GC content: 67.27
Gene sequence:
>825_bases ATGAAAAACAGCAAGGTCCGCCCCACCCCCGATGGTGAACACGTCCTGGTAGCCGGCGGCAGATGCCTGCTTGTGGGCGC TGGCCCGGGCGACCCGGAGCTGCTCACCCTCAAGGCCCTCAAGGCCATCCAGAATGCCACCGTGCTGCTGGTCGACGACC TCGTCAGCGACGAGATCGTCGCGTTTGCGCGGCCCGACGCACGCATCGTCCATGTGGGCAAGCGCGGCGGCTGCAAATCC ACCCCGCAGGCCTTCATCGAAAAGCTCATGATCATGGCGGCCCGCGAAGGCGAAAACGTCGTGCGCCTCAAGGGCGGTGA TCCCTTCATCTTCGGCCGCGGTGGCGAGGAAGTCGAGCACCTGAAGGCTGCCGGCGTGGAGGTGGAGGTCATCAACGGCA TCACTGCCGGGCTGGCGGCGGTGACCTCGCTGGGCGTGCCGCTCACGCACCGCCAGCATGCACATGGCGTGGTGTTTGTG ACCGGCCACGCCAAGCCCGGCGATGCCGGCACCGACTGGGCCGCACTGGCGGCAACGGCCGCGCAGGCCAGGCTCACCCT GGTGATCTACATGGGCGTGACGGGTTCACAGCACATCCAGGACCAGCTGTTGCAGGGCCTGCCCGCGGACACCCCAGTGG CCATCATCCAGAACGCCAGCCTGCCGGGCCAGCGCCATGCAATCACCACCCTGGCCACCATGCGCACCACGATAGCTCGC GAGCACCTGCAGAGCCCCAGCGTGATCGTGGTGGGCGATGTACTGCGCGGCGTGGCCCTGCTGGCCGAGCATCCGGAAGA GCAGAAGCTGCGGGAGTTTGGCTGA
Upstream 100 bases:
>100_bases GTACCGCCGCGTATATCCGCGCGGTCCTCTCGGGTACACATGCCGTGCCCGCATCGATTGCCCGGCAGGTGGAACATATC TTGCAACTGGTCTCGCAATT
Downstream 100 bases:
>100_bases GGCTCTGAGACACTAAGGCGCTGCGGCTCTGAGCCCTGCAGTCCACGGTGTCCGTTGAGACATGCTGAGGCATGCGGTGG CGCGCAACGGCCTGCGGTGC
Product: uroporphyrinogen-III C-methyltransferase
Products: NA
Alternate protein names: Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKNSKVRPTPDGEHVLVAGGRCLLVGAGPGDPELLTLKALKAIQNATVLLVDDLVSDEIVAFARPDARIVHVGKRGGCKS TPQAFIEKLMIMAAREGENVVRLKGGDPFIFGRGGEEVEHLKAAGVEVEVINGITAGLAAVTSLGVPLTHRQHAHGVVFV TGHAKPGDAGTDWAALAATAAQARLTLVIYMGVTGSQHIQDQLLQGLPADTPVAIIQNASLPGQRHAITTLATMRTTIAR EHLQSPSVIVVGDVLRGVALLAEHPEEQKLREFG
Sequences:
>Translated_274_residues MKNSKVRPTPDGEHVLVAGGRCLLVGAGPGDPELLTLKALKAIQNATVLLVDDLVSDEIVAFARPDARIVHVGKRGGCKS TPQAFIEKLMIMAAREGENVVRLKGGDPFIFGRGGEEVEHLKAAGVEVEVINGITAGLAAVTSLGVPLTHRQHAHGVVFV TGHAKPGDAGTDWAALAATAAQARLTLVIYMGVTGSQHIQDQLLQGLPADTPVAIIQNASLPGQRHAITTLATMRTTIAR EHLQSPSVIVVGDVLRGVALLAEHPEEQKLREFG >Mature_274_residues MKNSKVRPTPDGEHVLVAGGRCLLVGAGPGDPELLTLKALKAIQNATVLLVDDLVSDEIVAFARPDARIVHVGKRGGCKS TPQAFIEKLMIMAAREGENVVRLKGGDPFIFGRGGEEVEHLKAAGVEVEVINGITAGLAAVTSLGVPLTHRQHAHGVVFV TGHAKPGDAGTDWAALAATAAQARLTLVIYMGVTGSQHIQDQLLQGLPADTPVAIIQNASLPGQRHAITTLATMRTTIAR EHLQSPSVIVVGDVLRGVALLAEHPEEQKLREFG
Specific function: Catalyzes both methylations at C-2 and C-7 of uroporphyrinogen III leading to precorrin-1 and precorrin-2; their oxidative esterification gives respectively factor I octamethyl ester and sirohydrochlorin [H]
COG id: COG0007
COG function: function code H; Uroporphyrinogen-III methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=237, Percent_Identity=46.4135021097046, Blast_Score=193, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322922, Length=233, Percent_Identity=31.7596566523605, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 28788; Mature: 28788
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00839 SUMT_1 ; PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSKVRPTPDGEHVLVAGGRCLLVGAGPGDPELLTLKALKAIQNATVLLVDDLVSDEIV CCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCEEHHHHHHHHCCCEEEEEECCCCCCEE AFARPDARIVHVGKRGGCKSTPQAFIEKLMIMAAREGENVVRLKGGDPFIFGRGGEEVEH EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHH LKAAGVEVEVINGITAGLAAVTSLGVPLTHRQHAHGVVFVTGHAKPGDAGTDWAALAATA HHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH AQARLTLVIYMGVTGSQHIQDQLLQGLPADTPVAIIQNASLPGQRHAITTLATMRTTIAR HHCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH EHLQSPSVIVVGDVLRGVALLAEHPEEQKLREFG HHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure MKNSKVRPTPDGEHVLVAGGRCLLVGAGPGDPELLTLKALKAIQNATVLLVDDLVSDEIV CCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCEEHHHHHHHHCCCEEEEEECCCCCCEE AFARPDARIVHVGKRGGCKSTPQAFIEKLMIMAAREGENVVRLKGGDPFIFGRGGEEVEH EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCHHHH LKAAGVEVEVINGITAGLAAVTSLGVPLTHRQHAHGVVFVTGHAKPGDAGTDWAALAATA HHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH AQARLTLVIYMGVTGSQHIQDQLLQGLPADTPVAIIQNASLPGQRHAITTLATMRTTIAR HHCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH EHLQSPSVIVVGDVLRGVALLAEHPEEQKLREFG HHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]