Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789100
Identifier: 91789100
GI number: 91789100
Start: 3430697
End: 3431224
Strand: Reverse
Name: 91789100
Synonym: Bpro_3240
Alternate gene names: NA
Gene position: 3431224-3430697 (Counterclockwise)
Preceding gene: 91789101
Following gene: 91789097
Centisome position: 65.98
GC content: 64.39
Gene sequence:
>528_bases ATGAAAGTCCTGAATCTCCAGTGCGCGCAGCAGCATTCCTTTGAAGGCTGGTTTGCGTCTGAAGACGATTTTCAGACGCA ACTGACGCGTGGATTGGTTGAATGTCCGATGTGTGCCGACAAAGGCATTCATAAGCTACCCAGCGCGCCGCGGCTCAATC TCGGTGGGCACCCGGCCCAGGGCGCCGCATTGGGCCAGGTCGCGCAGGATGCTCCACCCACCGCGCCTGCCACGCGCGTC CGGGAAGGCGTTGCAGCATCTCGCGCGGACGCCCTGACCAGTGTGGTGGCCGGTGCAAGCCCTGCCGAGCAGGCGGCCTT TCTCAAAGCGCTGCGCCATGTGGTGGCCCACACCGAAGATGTCGGCGAGCGCTTTGCCGACGAGGCACGCCGCATGCATT ATGGCGAGGCCGAAGCCCGCAGCATTCGCGGCCAGGCCAGCGCGCGTGAAGCCGTGGAGCTGGTGGAAGAGGGCATTGAT GTCATGCCCTTGCCGCTGCCGCTGGCCGTCAAGGAAACCCTGCAGTGA
Upstream 100 bases:
>100_bases ACCCTCACCGGAGCCCTGTGGCTGCAAAACGTGCTGTCGGGGGTATGGGCATTGGACTGGCAAACTACCGCGCCGGAGCG GGACTTGCGATAATCTGCCC
Downstream 100 bases:
>100_bases AATTGGCCCCCACGGTCGCTCACTTCGTGTAGCTCCCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGTCTGGCAAAGCCA GTCCCGCGGCCCCTGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKVLNLQCAQQHSFEGWFASEDDFQTQLTRGLVECPMCADKGIHKLPSAPRLNLGGHPAQGAALGQVAQDAPPTAPATRV REGVAASRADALTSVVAGASPAEQAAFLKALRHVVAHTEDVGERFADEARRMHYGEAEARSIRGQASAREAVELVEEGID VMPLPLPLAVKETLQ
Sequences:
>Translated_175_residues MKVLNLQCAQQHSFEGWFASEDDFQTQLTRGLVECPMCADKGIHKLPSAPRLNLGGHPAQGAALGQVAQDAPPTAPATRV REGVAASRADALTSVVAGASPAEQAAFLKALRHVVAHTEDVGERFADEARRMHYGEAEARSIRGQASAREAVELVEEGID VMPLPLPLAVKETLQ >Mature_175_residues MKVLNLQCAQQHSFEGWFASEDDFQTQLTRGLVECPMCADKGIHKLPSAPRLNLGGHPAQGAALGQVAQDAPPTAPATRV REGVAASRADALTSVVAGASPAEQAAFLKALRHVVAHTEDVGERFADEARRMHYGEAEARSIRGQASAREAVELVEEGID VMPLPLPLAVKETLQ
Specific function: Unknown
COG id: COG5319
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18655; Mature: 18655
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLNLQCAQQHSFEGWFASEDDFQTQLTRGLVECPMCADKGIHKLPSAPRLNLGGHPAQ CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCC GAALGQVAQDAPPTAPATRVREGVAASRADALTSVVAGASPAEQAAFLKALRHVVAHTED CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VGERFADEARRMHYGEAEARSIRGQASAREAVELVEEGIDVMPLPLPLAVKETLQ HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKVLNLQCAQQHSFEGWFASEDDFQTQLTRGLVECPMCADKGIHKLPSAPRLNLGGHPAQ CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCC GAALGQVAQDAPPTAPATRVREGVAASRADALTSVVAGASPAEQAAFLKALRHVVAHTED CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VGERFADEARRMHYGEAEARSIRGQASAREAVELVEEGIDVMPLPLPLAVKETLQ HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA