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The map label for this gene is fadE25 [H]

Identifier: 91789001

GI number: 91789001

Start: 3315434

End: 3317224

Strand: Reverse

Name: fadE25 [H]

Synonym: Bpro_3141

Alternate gene names: 91789001

Gene position: 3317224-3315434 (Counterclockwise)

Preceding gene: 91789002

Following gene: 91789000

Centisome position: 63.79

GC content: 62.81

Gene sequence:

>1791_bases
ATGAGTTACGTAGCCCCTCTGAAGGACATGCTGTTCGATATCAGGCACCTGGCCCGCATCGACCAGGTGGCGCAAATTCC
CGGCTTTGAAGACGCCGGTTTCGAGACGGCGCAGGCGGTGCTTGAAGAGTGCGCCAGGTTCAACCAGGACGTGCTGTCGC
CGCTGAACTGGGAGGGCGACAAAAATCCTTCGAGCTGGAAAGATGGCGTGGTCACCACCACCCCTGGTTTCAAGCAGGCC
TTCAAACAATACGCGGAAGGTGGTTGGCAGGGCCTGCAGCATCCGGCCGAGTTTGGCGGCCAGGGCCTGCCCAAGACCAT
AGGCGCGGCCTGTGGCGAGATGCTCAATTCGGCCAACATGAGTTTTGCCCTGTGCCCGCTGCTCAGTGACGGCGCCATCG
AAGCCCTGCTGACGGCCGGCTCCGATGATCTGAAGGCCATCTACCTTGAAAAGCTGGTCAGCGGACAGTGGACCGGCACC
ATGAACCTGACCGAGCCGCAGGCGGGCTCTGACCTCGCCATGGTGCGCAGCCGCGCCGAACCGCAGCCCGATGGCACCTA
CAAGGTGTTCGGCACCAAGATATTCATCACCTACGGTGAGCACGACATGGCCGAGAACATCGTGCACCTGGTGCTGGCGC
GCGTGACCGGCGCACCCGAAGGCGTGAAGGGCATCAGCCTGTTTGTCGTGCCCAAGTTTCTGGTCAACGAGGACGGTTCC
CTGGGCGCGCGCAACGATGTGCATTGCGTCAGCATCGAGCACAAGCTGGGCATCAAGGCATCGCCCACGGCCGTGCTGCA
GTATGGCGACCACGGCGGCGCCGTCGGCTATATCGTCGGTGAAGAAAACCGCGGGCTGGAGTACATGTTCATCATGATGA
ATGCGGCGCGCTATGCCGTCGGCATGCAGGGCATTGCCGTGGCCGAGCGCGCTTACCAGAAGGCGGTGAGCTTTGCCCGG
GAGCGGGTGCAGAGCCGACCCGTTGACGGATCGATCAAGGCCAGCGCGCCCATCATTCATCACCCCGACGTCAAGCGCAT
GCTGATGACCATGCGCGCCTACATCGAAGGGTGCCGCGCCATGGCGTCGGTCGCCGCGGCGGCCTACGATGCATCGCACC
ACCATCCTGATGCCGAAGTGCGCAAACAAAACCAGGCCTTCTACGAGTTCATGGTGCCGCTGGTCAAGGGCTACAGCACC
GAGATGAGCCTGGAAGTCACTTCGCTGGGCGTGCAGGTCCACGGCGGCATGGGTTTCATCGAGGAGACCGGCGCGGCGCA
GTACATGCGCGATGCCAAGATCCTGACCATTTACGAAGGCACGACGGCCATCCAGGCCAACGACCTGGTGGGCCGCAAGA
CCTCGCGCGATGGCGGCCAGACAGCCAAGGCGATTGCGAAGCAGATTGAAGCGACTGAAAGCGAACTGATCCGGCAGGGC
AATGCCGACGCAGTGGCGGTGGCCAGGCGGCTGAAGGCCGCCCGTGAAGCATTGGTGGATGTGGTCGAGTTTGTGGCGGG
CAACACCAAGGCCAGCCCGAACGCCGTGTTTGCCGGCAGCGTGCCCTACCTGATGCTGGCAGGCAACGTGGTGGCCGGCT
GGCAGATGGCGCGTTCATTACTGGTGGCCCAGGAGCAGCTTGCCCAGGGCGTGGACGCCGATTTCATGAAGGCCAAAATC
ACCACCGCCCGTTTTTATGCCGACCACCTGCTGACCAAGGCGCCCGGCATGCGCGACAGCATTGTCGAAGGTGCGGACTG
CGTGACTGCCCTGGCACTGGACGCATTCTAA

Upstream 100 bases:

>100_bases
GCGGCACTGTAATCCCCTGAAAGGGCGTCTTGATTGACGCCCTTTTTGTATCTGGAACGGCCGCACCCCGACGGCCGCAA
TGAAAAAAGTGGAGAGACAA

Downstream 100 bases:

>100_bases
AACCCGTCCGCTATTAAATTAGTAGCTGGTTGCGCCCGTTAACAATGGGCTAGCGTCATTTTTTGAAAATGTTGTTTTAC
TGACCTGTTGAAAGACACCA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MSYVAPLKDMLFDIRHLARIDQVAQIPGFEDAGFETAQAVLEECARFNQDVLSPLNWEGDKNPSSWKDGVVTTTPGFKQA
FKQYAEGGWQGLQHPAEFGGQGLPKTIGAACGEMLNSANMSFALCPLLSDGAIEALLTAGSDDLKAIYLEKLVSGQWTGT
MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGS
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAVGMQGIAVAERAYQKAVSFAR
ERVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRAMASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLVKGYST
EMSLEVTSLGVQVHGGMGFIEETGAAQYMRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQG
NADAVAVARRLKAAREALVDVVEFVAGNTKASPNAVFAGSVPYLMLAGNVVAGWQMARSLLVAQEQLAQGVDADFMKAKI
TTARFYADHLLTKAPGMRDSIVEGADCVTALALDAF

Sequences:

>Translated_596_residues
MSYVAPLKDMLFDIRHLARIDQVAQIPGFEDAGFETAQAVLEECARFNQDVLSPLNWEGDKNPSSWKDGVVTTTPGFKQA
FKQYAEGGWQGLQHPAEFGGQGLPKTIGAACGEMLNSANMSFALCPLLSDGAIEALLTAGSDDLKAIYLEKLVSGQWTGT
MNLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGS
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAVGMQGIAVAERAYQKAVSFAR
ERVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRAMASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLVKGYST
EMSLEVTSLGVQVHGGMGFIEETGAAQYMRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQG
NADAVAVARRLKAAREALVDVVEFVAGNTKASPNAVFAGSVPYLMLAGNVVAGWQMARSLLVAQEQLAQGVDADFMKAKI
TTARFYADHLLTKAPGMRDSIVEGADCVTALALDAF
>Mature_595_residues
SYVAPLKDMLFDIRHLARIDQVAQIPGFEDAGFETAQAVLEECARFNQDVLSPLNWEGDKNPSSWKDGVVTTTPGFKQAF
KQYAEGGWQGLQHPAEFGGQGLPKTIGAACGEMLNSANMSFALCPLLSDGAIEALLTAGSDDLKAIYLEKLVSGQWTGTM
NLTEPQAGSDLAMVRSRAEPQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGSL
GARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAVGMQGIAVAERAYQKAVSFARE
RVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRAMASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLVKGYSTE
MSLEVTSLGVQVHGGMGFIEETGAAQYMRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQGN
ADAVAVARRLKAAREALVDVVEFVAGNTKASPNAVFAGSVPYLMLAGNVVAGWQMARSLLVAQEQLAQGVDADFMKAKIT
TARFYADHLLTKAPGMRDSIVEGADCVTALALDAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=421, Percent_Identity=26.8408551068884, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI4557233, Length=444, Percent_Identity=26.1261261261261, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI4501859, Length=405, Percent_Identity=25.4320987654321, Blast_Score=102, Evalue=2e-21,
Organism=Homo sapiens, GI4557235, Length=383, Percent_Identity=28.1984334203655, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI76496475, Length=383, Percent_Identity=28.1984334203655, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=414, Percent_Identity=24.3961352657005, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI226958412, Length=425, Percent_Identity=24.4705882352941, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI226958414, Length=382, Percent_Identity=24.869109947644, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=24.4505494505494, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI4557231, Length=310, Percent_Identity=24.8387096774194, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI187960098, Length=310, Percent_Identity=24.8387096774194, Blast_Score=76, Evalue=8e-14,
Organism=Escherichia coli, GI87082384, Length=325, Percent_Identity=27.3846153846154, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=24.4791666666667, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17508101, Length=417, Percent_Identity=26.1390887290168, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI86563381, Length=351, Percent_Identity=28.4900284900285, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=351, Percent_Identity=28.4900284900285, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=395, Percent_Identity=25.0632911392405, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=411, Percent_Identity=25.5474452554745, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=372, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=413, Percent_Identity=24.6973365617433, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=377, Percent_Identity=24.4031830238727, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=367, Percent_Identity=23.7057220708447, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=419, Percent_Identity=24.582338902148, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=24.7956403269755, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=380, Percent_Identity=25.7894736842105, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=246, Percent_Identity=27.2357723577236, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=25.177304964539, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=301, Percent_Identity=25.5813953488372, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355753, Length=447, Percent_Identity=26.1744966442953, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281363737, Length=364, Percent_Identity=26.6483516483516, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=27.5132275132275, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666513, Length=416, Percent_Identity=26.2019230769231, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24660351, Length=450, Percent_Identity=24.4444444444444, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64125; Mature: 63994

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVAPLKDMLFDIRHLARIDQVAQIPGFEDAGFETAQAVLEECARFNQDVLSPLNWEGD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCC
KNPSSWKDGVVTTTPGFKQAFKQYAEGGWQGLQHPAEFGGQGLPKTIGAACGEMLNSANM
CCCCCCCCCEEECCCCHHHHHHHHHCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCC
SFALCPLLSDGAIEALLTAGSDDLKAIYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAE
CEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCC
PQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGS
CCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCC
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAV
CCCCCCEEEEEEHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEHHHHHHHH
GMQGIAVAERAYQKAVSFARERVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
MASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCH
EETGAAQYMRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQG
HHCCHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NADAVAVARRLKAAREALVDVVEFVAGNTKASPNAVFAGSVPYLMLAGNVVAGWQMARSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHH
LVAQEQLAQGVDADFMKAKITTARFYADHLLTKAPGMRDSIVEGADCVTALALDAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
SYVAPLKDMLFDIRHLARIDQVAQIPGFEDAGFETAQAVLEECARFNQDVLSPLNWEGD
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCC
KNPSSWKDGVVTTTPGFKQAFKQYAEGGWQGLQHPAEFGGQGLPKTIGAACGEMLNSANM
CCCCCCCCCEEECCCCHHHHHHHHHCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCC
SFALCPLLSDGAIEALLTAGSDDLKAIYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAE
CEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHCCC
PQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNEDGS
CCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCC
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAVGYIVGEENRGLEYMFIMMNAARYAV
CCCCCCEEEEEEHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEHHHHHHHH
GMQGIAVAERAYQKAVSFARERVQSRPVDGSIKASAPIIHHPDVKRMLMTMRAYIEGCRA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
MASVAAAAYDASHHHPDAEVRKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMGFI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCH
EETGAAQYMRDAKILTIYEGTTAIQANDLVGRKTSRDGGQTAKAIAKQIEATESELIRQG
HHCCHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NADAVAVARRLKAAREALVDVVEFVAGNTKASPNAVFAGSVPYLMLAGNVVAGWQMARSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHH
LVAQEQLAQGVDADFMKAKITTARFYADHLLTKAPGMRDSIVEGADCVTALALDAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]