Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789000
Identifier: 91789000
GI number: 91789000
Start: 3314381
End: 3315334
Strand: Reverse
Name: 91789000
Synonym: Bpro_3140
Alternate gene names: NA
Gene position: 3315334-3314381 (Counterclockwise)
Preceding gene: 91789001
Following gene: 91788999
Centisome position: 63.75
GC content: 63.31
Gene sequence:
>954_bases ATGTCCAGACTTCCCGCACCGCTGAACAACCTGCCGTTGCCCATCATTGGCTCGCCGCTGTTCATCATCAGCAACCCCCA GCTGGTGATCGAGCAATGCAAGGCCGGCGTGGTCGGCGCCATGCCTGCGCTCAATGCACGTCCCGCCGCGCAGCTGGAAG ACTGGCTGGCCGAGATCACCGAGACCTTGGCGGCGTATAACAAAGCCAATCCTGACAAGCCTGCCGCACCGTTTGCCATC AACCAGATCGTGCACAAGTCCAACGAGCGGCTGGAGCATGACATGGCGCTGTGCGTGAAGTACAAGGTGCCCATCTGCAT CACCAGCCTGGGCGCGCGCGAAGACATCAACGCCGCGGCCCACAGTTACGGCGGCGTGGTGCTGCACGACATCATCAACA ACAAGCATGCGCGCAAGGCGATCGAAAAGGGTGCCGACGGCCTGATTGCCGTGGCGGCCGGCGCGGGTGGCCATGCGGGC GTCAAGAGCCCGTTTGCCCTGATCCAGGAAATTCGCCAGTGGTTTGACGGCCCGCTGGCGCTGTCTGGCGCCATCTCGAC CGGTGGCGCGGTGCTGGCCGCGCGCGCCATGGGCGCCGACTTTGCGTACATCGGTTCGGCGTTTATCGCCACGGAAGAAG CCCGCGCCTCCGACGCCTACAAGCAGGCGATCGTTGAAGGCAATTCCGACGACATCATTTACAGCAATCTCTTTACCGGC GTGCACGGCAACTACCTTGCCCCGTCCATCCGGGCCGCGGGCATGGACCCCGAGAACCTGCCCGAGAGCGATCCGAGCAA GATGAACTTTGGCGGCGACAAGTCCAAGGCCTGGAAGGACATCTGGGGTTGCGGCCAGGGCATCGGCCCGGTCAGCAAGG TGCAGAGCGCCGCAGAATTTGTAGCCCAGCTCAAGCGTGAGTACGAAGACGCGCGCATTCGGCTGGCTCTCTAG
Upstream 100 bases:
>100_bases AAACCCGTCCGCTATTAAATTAGTAGCTGGTTGCGCCCGTTAACAATGGGCTAGCGTCATTTTTTGAAAATGTTGTTTTA CTGACCTGTTGAAAGACACC
Downstream 100 bases:
>100_bases GCGGGTGCCCTAGCATTTCGCGTCGGCTTTCATCCCGCCCTCATGCGTTCAGCCGACCAGCGCCTGCACGGCATTGATGC CCTCAAGGGCATCGCCTGCG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAI NQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAG VKSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL
Sequences:
>Translated_317_residues MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAI NQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAG VKSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL >Mature_316_residues SRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAIN QIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGV KSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTGV HGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33549; Mature: 33417
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEIT CCCCCCCCCCCCCCEECCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH ETLAAYNKANPDKPAAPFAINQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHH HSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGVKSPFALIQEIRQWFDGPLA HHCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE LSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG EECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHC VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEF CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH VAQLKREYEDARIRLAL HHHHHHHHHCCEEEEEC >Mature Secondary Structure SRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEIT CCCCCCCCCCCCCEECCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH ETLAAYNKANPDKPAAPFAINQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHH HSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGVKSPFALIQEIRQWFDGPLA HHCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE LSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG EECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHC VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEF CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH VAQLKREYEDARIRLAL HHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA