Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789000

Identifier: 91789000

GI number: 91789000

Start: 3314381

End: 3315334

Strand: Reverse

Name: 91789000

Synonym: Bpro_3140

Alternate gene names: NA

Gene position: 3315334-3314381 (Counterclockwise)

Preceding gene: 91789001

Following gene: 91788999

Centisome position: 63.75

GC content: 63.31

Gene sequence:

>954_bases
ATGTCCAGACTTCCCGCACCGCTGAACAACCTGCCGTTGCCCATCATTGGCTCGCCGCTGTTCATCATCAGCAACCCCCA
GCTGGTGATCGAGCAATGCAAGGCCGGCGTGGTCGGCGCCATGCCTGCGCTCAATGCACGTCCCGCCGCGCAGCTGGAAG
ACTGGCTGGCCGAGATCACCGAGACCTTGGCGGCGTATAACAAAGCCAATCCTGACAAGCCTGCCGCACCGTTTGCCATC
AACCAGATCGTGCACAAGTCCAACGAGCGGCTGGAGCATGACATGGCGCTGTGCGTGAAGTACAAGGTGCCCATCTGCAT
CACCAGCCTGGGCGCGCGCGAAGACATCAACGCCGCGGCCCACAGTTACGGCGGCGTGGTGCTGCACGACATCATCAACA
ACAAGCATGCGCGCAAGGCGATCGAAAAGGGTGCCGACGGCCTGATTGCCGTGGCGGCCGGCGCGGGTGGCCATGCGGGC
GTCAAGAGCCCGTTTGCCCTGATCCAGGAAATTCGCCAGTGGTTTGACGGCCCGCTGGCGCTGTCTGGCGCCATCTCGAC
CGGTGGCGCGGTGCTGGCCGCGCGCGCCATGGGCGCCGACTTTGCGTACATCGGTTCGGCGTTTATCGCCACGGAAGAAG
CCCGCGCCTCCGACGCCTACAAGCAGGCGATCGTTGAAGGCAATTCCGACGACATCATTTACAGCAATCTCTTTACCGGC
GTGCACGGCAACTACCTTGCCCCGTCCATCCGGGCCGCGGGCATGGACCCCGAGAACCTGCCCGAGAGCGATCCGAGCAA
GATGAACTTTGGCGGCGACAAGTCCAAGGCCTGGAAGGACATCTGGGGTTGCGGCCAGGGCATCGGCCCGGTCAGCAAGG
TGCAGAGCGCCGCAGAATTTGTAGCCCAGCTCAAGCGTGAGTACGAAGACGCGCGCATTCGGCTGGCTCTCTAG

Upstream 100 bases:

>100_bases
AAACCCGTCCGCTATTAAATTAGTAGCTGGTTGCGCCCGTTAACAATGGGCTAGCGTCATTTTTTGAAAATGTTGTTTTA
CTGACCTGTTGAAAGACACC

Downstream 100 bases:

>100_bases
GCGGGTGCCCTAGCATTTCGCGTCGGCTTTCATCCCGCCCTCATGCGTTCAGCCGACCAGCGCCTGCACGGCATTGATGC
CCTCAAGGGCATCGCCTGCG

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAI
NQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAG
VKSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL

Sequences:

>Translated_317_residues
MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAI
NQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAG
VKSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL
>Mature_316_residues
SRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEITETLAAYNKANPDKPAAPFAIN
QIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAAHSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGV
KSPFALIQEIRQWFDGPLALSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTGV
HGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEFVAQLKREYEDARIRLAL

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 33549; Mature: 33417

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEIT
CCCCCCCCCCCCCCEECCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
ETLAAYNKANPDKPAAPFAINQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHH
HSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGVKSPFALIQEIRQWFDGPLA
HHCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE
LSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG
EECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHC
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEF
CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VAQLKREYEDARIRLAL
HHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
SRLPAPLNNLPLPIIGSPLFIISNPQLVIEQCKAGVVGAMPALNARPAAQLEDWLAEIT
CCCCCCCCCCCCCEECCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
ETLAAYNKANPDKPAAPFAINQIVHKSNERLEHDMALCVKYKVPICITSLGAREDINAAA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHH
HSYGGVVLHDIINNKHARKAIEKGADGLIAVAAGAGGHAGVKSPFALIQEIRQWFDGPLA
HHCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE
LSGAISTGGAVLAARAMGADFAYIGSAFIATEEARASDAYKQAIVEGNSDDIIYSNLFTG
EECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHC
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGGDKSKAWKDIWGCGQGIGPVSKVQSAAEF
CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VAQLKREYEDARIRLAL
HHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA