Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788961
Identifier: 91788961
GI number: 91788961
Start: 3273535
End: 3274503
Strand: Reverse
Name: 91788961
Synonym: Bpro_3101
Alternate gene names: NA
Gene position: 3274503-3273535 (Counterclockwise)
Preceding gene: 91788962
Following gene: 91788960
Centisome position: 62.97
GC content: 61.92
Gene sequence:
>969_bases ATGTCCATCAATCGAAGAGAATTCGTCGGTGCTTCCCTGGCCCTGGGGTTTGGCGCAGCCAGCGCGCAAACGCCAAACTG GCCGCTCAAACCCCTCAGGCTGGTGGTGCCTTACCCACCGGGCGGATCGTCGGACATCATTGCGCGTGCGATTGCCCAGC CCTTGTCCGACGCCCTCAAGCAAAGCGTCATCGTTGACAACAAGGCCGGCGCCAACGGCAACCTGGGCGCGGATTTTGTG GCGAAGTCCGCACCCGACGGCTATACGATGCTGCTTTGCGACACCGGCGCGCTGGCCATCAGCCCGTCGGTCTACACCAA GCTGAGCTTTGATCCTTCCAGGGATCTGCGCGGCGTGACCATGCTGGCGTATTCACCGCATTTGCTGGTGGTGCACCCCT CCGTGCCGGCCAACAACCTCAAGGAGCTGGTGGAGTTGTCGAAGCGGTCGAATATCAATTTTGCGGTGACCGCCATGGGC AGCGCGCCGCACCTGGCGGGGGTCGCGGTGGAGCGCGCCAGTGGCGCCAAGTGGCAATACATCCCCTACAAGGGTGGCTC GCAAGCGATCACCGACACCATCGCCGGCCAGACCCAGGTCCTGATGAATGGCATGCTGGCTACCTTGCCGCACGTGCAGA GCGGCAAGCTCAAAATACTGGGTGTTTCCAAGAGTACGCGCATGCCGCTGATCGGCAACGTCCCGACCTTGTCTGAACAG GGCATCAGCAATTTTGAATCCGGAACCTGGCAGGGGCTGCTGGTGGCCAACGGCACACCGGCCGCCATCGTGAACCGGCT CAACACCGAACTCATCAAGATCATCCGCAGTCCTGACATTCGGGCCAAGCTGGCCGGGCAGGGCGCGGAAGTGGTGACCA TGACGTCAGCCCAGCAGGACGACTTTTTCAATCGCGAGAAAACCCGCTGGGCCAAGGTCGTGGCAGACGCGGGTATCAAG CTGGAGTGA
Upstream 100 bases:
>100_bases ACCATGAGATTGCCTGAAGGCCCCAGCCCCATCACCTGATTTCAGAGGTTCATGGCCGCAGGCTGCGGCTGGTTTTTTTC CAAACAGAGAAGGCAAGATC
Downstream 100 bases:
>100_bases TAGGTAACAGGTTACAGGTGACAGGCTTCGGCCTGTGGGCAGGTTCGCACCAGGCCTTTTAATACTCGCCTCCAGGGGGA ATTGTCATGCCGCCGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFV AKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMG SAPHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIK LE
Sequences:
>Translated_322_residues MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFV AKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMG SAPHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIK LE >Mature_321_residues SINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFVA KSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGS APHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQG ISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIKL E
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34040; Mature: 33908
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALK CCCCHHHHCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH QSVIVDNKAGANGNLGADFVAKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVT HHEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCCCEE MLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGSAPHLAGVAVERASGAKWQY EEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCEEEE IPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ EECCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCCHH GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQD CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC DFFNREKTRWAKVVADAGIKLE HHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALK CCCHHHHCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH QSVIVDNKAGANGNLGADFVAKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVT HHEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCCCEE MLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGSAPHLAGVAVERASGAKWQY EEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCEEEE IPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ EECCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCCHH GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQD CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC DFFNREKTRWAKVVADAGIKLE HHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]