Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788961

Identifier: 91788961

GI number: 91788961

Start: 3273535

End: 3274503

Strand: Reverse

Name: 91788961

Synonym: Bpro_3101

Alternate gene names: NA

Gene position: 3274503-3273535 (Counterclockwise)

Preceding gene: 91788962

Following gene: 91788960

Centisome position: 62.97

GC content: 61.92

Gene sequence:

>969_bases
ATGTCCATCAATCGAAGAGAATTCGTCGGTGCTTCCCTGGCCCTGGGGTTTGGCGCAGCCAGCGCGCAAACGCCAAACTG
GCCGCTCAAACCCCTCAGGCTGGTGGTGCCTTACCCACCGGGCGGATCGTCGGACATCATTGCGCGTGCGATTGCCCAGC
CCTTGTCCGACGCCCTCAAGCAAAGCGTCATCGTTGACAACAAGGCCGGCGCCAACGGCAACCTGGGCGCGGATTTTGTG
GCGAAGTCCGCACCCGACGGCTATACGATGCTGCTTTGCGACACCGGCGCGCTGGCCATCAGCCCGTCGGTCTACACCAA
GCTGAGCTTTGATCCTTCCAGGGATCTGCGCGGCGTGACCATGCTGGCGTATTCACCGCATTTGCTGGTGGTGCACCCCT
CCGTGCCGGCCAACAACCTCAAGGAGCTGGTGGAGTTGTCGAAGCGGTCGAATATCAATTTTGCGGTGACCGCCATGGGC
AGCGCGCCGCACCTGGCGGGGGTCGCGGTGGAGCGCGCCAGTGGCGCCAAGTGGCAATACATCCCCTACAAGGGTGGCTC
GCAAGCGATCACCGACACCATCGCCGGCCAGACCCAGGTCCTGATGAATGGCATGCTGGCTACCTTGCCGCACGTGCAGA
GCGGCAAGCTCAAAATACTGGGTGTTTCCAAGAGTACGCGCATGCCGCTGATCGGCAACGTCCCGACCTTGTCTGAACAG
GGCATCAGCAATTTTGAATCCGGAACCTGGCAGGGGCTGCTGGTGGCCAACGGCACACCGGCCGCCATCGTGAACCGGCT
CAACACCGAACTCATCAAGATCATCCGCAGTCCTGACATTCGGGCCAAGCTGGCCGGGCAGGGCGCGGAAGTGGTGACCA
TGACGTCAGCCCAGCAGGACGACTTTTTCAATCGCGAGAAAACCCGCTGGGCCAAGGTCGTGGCAGACGCGGGTATCAAG
CTGGAGTGA

Upstream 100 bases:

>100_bases
ACCATGAGATTGCCTGAAGGCCCCAGCCCCATCACCTGATTTCAGAGGTTCATGGCCGCAGGCTGCGGCTGGTTTTTTTC
CAAACAGAGAAGGCAAGATC

Downstream 100 bases:

>100_bases
TAGGTAACAGGTTACAGGTGACAGGCTTCGGCCTGTGGGCAGGTTCGCACCAGGCCTTTTAATACTCGCCTCCAGGGGGA
ATTGTCATGCCGCCGATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFV
AKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMG
SAPHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ
GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIK
LE

Sequences:

>Translated_322_residues
MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFV
AKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMG
SAPHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ
GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIK
LE
>Mature_321_residues
SINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALKQSVIVDNKAGANGNLGADFVA
KSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVTMLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGS
APHLAGVAVERASGAKWQYIPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQG
ISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQDDFFNREKTRWAKVVADAGIKL
E

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34040; Mature: 33908

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALK
CCCCHHHHCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QSVIVDNKAGANGNLGADFVAKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVT
HHEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCCCEE
MLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGSAPHLAGVAVERASGAKWQY
EEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCEEEE
IPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ
EECCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCCHH
GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQD
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC
DFFNREKTRWAKVVADAGIKLE
HHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SINRREFVGASLALGFGAASAQTPNWPLKPLRLVVPYPPGGSSDIIARAIAQPLSDALK
CCCHHHHCCHHEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
QSVIVDNKAGANGNLGADFVAKSAPDGYTMLLCDTGALAISPSVYTKLSFDPSRDLRGVT
HHEEEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEECCCEEEEEECCCCCCCCCEE
MLAYSPHLLVVHPSVPANNLKELVELSKRSNINFAVTAMGSAPHLAGVAVERASGAKWQY
EEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCEEEE
IPYKGGSQAITDTIAGQTQVLMNGMLATLPHVQSGKLKILGVSKSTRMPLIGNVPTLSEQ
EECCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCCHH
GISNFESGTWQGLLVANGTPAAIVNRLNTELIKIIRSPDIRAKLAGQGAEVVTMTSAQQD
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCC
DFFNREKTRWAKVVADAGIKLE
HHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]