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The map label for this gene is clpS [H]

Identifier: 91788801

GI number: 91788801

Start: 3104203

End: 3104580

Strand: Reverse

Name: clpS [H]

Synonym: Bpro_2941

Alternate gene names: 91788801

Gene position: 3104580-3104203 (Counterclockwise)

Preceding gene: 91788802

Following gene: 91788800

Centisome position: 59.7

GC content: 55.56

Gene sequence:

>378_bases
ATGAATTCCATGGCCAGCAAATCTCCCAAATCCCCGGCGTTGCCGCCGACGCCTGTCGTCAGGCCTGACGAGGTCAATGG
CGGGGATTCGGTCGTTCTGGAGCGTCGCCCCCAAAAGACCAAACCGCCCCAGATGTACCAGGTGGTTCTTCTCAATGACG
ATTACACCCCGATGGAGTTCGTCGTGGTCATCCTCCAGGAGTTTTTCAACAAAGACCATGAAACCGCCACGCAGATCATG
TTGAAGATCCACCTGGACGGCAAAGGCGTTTGCGGTGTGTTCTCCAAAGACGTGGCGGCCACCAAAGTCGACCAAGTGAC
AGAAGCAGCCCGAAAAAACGGGCACCCGCTGCAATGTGTCAGTGAGCCCATTGAATAA

Upstream 100 bases:

>100_bases
TTTTTTATGGGCGCAGAATAGCCGAATGAGTCACGATTGAATGTCGCGTTCCCGCCACCAATTTCCCTATTAGGCGCACT
GGGCTATATCGGTCGCTAGA

Downstream 100 bases:

>100_bases
TGACAAATCCGGCCAATATTCCATTCAGAAGTCAGTGAAGTAAAACGTCAGCAAGCCGAAAGGAAAATCAATGATTGCCC
AGGAACTAGAAGTCAGCTTG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNSMASKSPKSPALPPTPVVRPDEVNGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIM
LKIHLDGKGVCGVFSKDVAATKVDQVTEAARKNGHPLQCVSEPIE

Sequences:

>Translated_125_residues
MNSMASKSPKSPALPPTPVVRPDEVNGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIM
LKIHLDGKGVCGVFSKDVAATKVDQVTEAARKNGHPLQCVSEPIE
>Mature_125_residues
MNSMASKSPKSPALPPTPVVRPDEVNGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEFVVVILQEFFNKDHETATQIM
LKIHLDGKGVCGVFSKDVAATKVDQVTEAARKNGHPLQCVSEPIE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=94, Percent_Identity=54.2553191489362, Blast_Score=113, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13801; Mature: 13801

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMASKSPKSPALPPTPVVRPDEVNGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHH
VVVILQEFFNKDHETATQIMLKIHLDGKGVCGVFSKDVAATKVDQVTEAARKNGHPLQCV
HHHHHHHHHCCCCCCCEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHC
SEPIE
CCCCC
>Mature Secondary Structure
MNSMASKSPKSPALPPTPVVRPDEVNGGDSVVLERRPQKTKPPQMYQVVLLNDDYTPMEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHH
VVVILQEFFNKDHETATQIMLKIHLDGKGVCGVFSKDVAATKVDQVTEAARKNGHPLQCV
HHHHHHHHHCCCCCCCEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHC
SEPIE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA