Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788780
Identifier: 91788780
GI number: 91788780
Start: 3084020
End: 3084424
Strand: Reverse
Name: 91788780
Synonym: Bpro_2920
Alternate gene names: NA
Gene position: 3084424-3084020 (Counterclockwise)
Preceding gene: 91788781
Following gene: 91788771
Centisome position: 59.31
GC content: 58.77
Gene sequence:
>405_bases ATGAAGAAAATCTGTATACCCCTGTTTCTGGCGGCAAGCGCCTTGCTCGCCCAGCAAGCCTTGGCCAGCGGCATCGACGG CGTCAGCGTCGCGCCGCTCATGTCAAAAGATCTTTCCGATCTGCCCGGCAAGGAAGGCCTGGTCATCACCGTGGACTACG CTCCCGGCGCTGCCGACCCTGTGCACCGCCACCGCGCACACGGTTTTATCTACGTGCTCGAAGGCTCCATCGTGATGCAG GTCAAGGGCGGCAAAGAAGTCACGCTGACACCGGGGCAGACTTTTTATGAAGGCCCCAATGACATTCACACCGTTGGCCG CAATGCCAGCACCACCCAGCCCGCAAAGTTCCTGGTGGTGCTCATCAAAAAGAAGAAGGGTGAGGTCCTGGAACTCGTGA AGTGA
Upstream 100 bases:
>100_bases CTTGATCCGCAACCCGGCATCTGAAATTCATCCCGTCGGGAGCGGGCTCGCGTGCCTGCGCGTGGGCCCGGTCTCGCCAA CAAACTTGAAGAGTCAAACC
Downstream 100 bases:
>100_bases AGTGAGATGAGCAGGGCCGGCAAGCCGGGCTGAAAAAAGCGGTACGGTTGCCTCACCGTGGTGTGCAAGAGACCGGCGTT GGGTTGGTGATGCAGTCCGC
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK
Sequences:
>Translated_134_residues MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK >Mature_134_residues MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14233; Mature: 14233
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADP CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCHHHHCCCCCCEEEEEECCCCCCCC VHRHRAHGFIYVLEGSIVMQVKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVV HHHHCCCCEEEEEECEEEEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEE LIKKKKGEVLELVK EEECCCCCEEECCC >Mature Secondary Structure MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADP CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCHHHHCCCCCCEEEEEECCCCCCCC VHRHRAHGFIYVLEGSIVMQVKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVV HHHHCCCCEEEEEECEEEEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEE LIKKKKGEVLELVK EEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA