Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788780

Identifier: 91788780

GI number: 91788780

Start: 3084020

End: 3084424

Strand: Reverse

Name: 91788780

Synonym: Bpro_2920

Alternate gene names: NA

Gene position: 3084424-3084020 (Counterclockwise)

Preceding gene: 91788781

Following gene: 91788771

Centisome position: 59.31

GC content: 58.77

Gene sequence:

>405_bases
ATGAAGAAAATCTGTATACCCCTGTTTCTGGCGGCAAGCGCCTTGCTCGCCCAGCAAGCCTTGGCCAGCGGCATCGACGG
CGTCAGCGTCGCGCCGCTCATGTCAAAAGATCTTTCCGATCTGCCCGGCAAGGAAGGCCTGGTCATCACCGTGGACTACG
CTCCCGGCGCTGCCGACCCTGTGCACCGCCACCGCGCACACGGTTTTATCTACGTGCTCGAAGGCTCCATCGTGATGCAG
GTCAAGGGCGGCAAAGAAGTCACGCTGACACCGGGGCAGACTTTTTATGAAGGCCCCAATGACATTCACACCGTTGGCCG
CAATGCCAGCACCACCCAGCCCGCAAAGTTCCTGGTGGTGCTCATCAAAAAGAAGAAGGGTGAGGTCCTGGAACTCGTGA
AGTGA

Upstream 100 bases:

>100_bases
CTTGATCCGCAACCCGGCATCTGAAATTCATCCCGTCGGGAGCGGGCTCGCGTGCCTGCGCGTGGGCCCGGTCTCGCCAA
CAAACTTGAAGAGTCAAACC

Downstream 100 bases:

>100_bases
AGTGAGATGAGCAGGGCCGGCAAGCCGGGCTGAAAAAAGCGGTACGGTTGCCTCACCGTGGTGTGCAAGAGACCGGCGTT
GGGTTGGTGATGCAGTCCGC

Product: cupin 2 barrel-domain containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain-Containing

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ
VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK

Sequences:

>Translated_134_residues
MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ
VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK
>Mature_134_residues
MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADPVHRHRAHGFIYVLEGSIVMQ
VKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVVLIKKKKGEVLELVK

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14233; Mature: 14233

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCHHHHCCCCCCEEEEEECCCCCCCC
VHRHRAHGFIYVLEGSIVMQVKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVV
HHHHCCCCEEEEEECEEEEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEE
LIKKKKGEVLELVK
EEECCCCCEEECCC
>Mature Secondary Structure
MKKICIPLFLAASALLAQQALASGIDGVSVAPLMSKDLSDLPGKEGLVITVDYAPGAADP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCHHHHCCCCCCEEEEEECCCCCCCC
VHRHRAHGFIYVLEGSIVMQVKGGKEVTLTPGQTFYEGPNDIHTVGRNASTTQPAKFLVV
HHHHCCCCEEEEEECEEEEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEE
LIKKKKGEVLELVK
EEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA